Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_L19
         (895 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0789 + 20569738-20570207,20573425-20573464,20573484-205735...    30   2.2  
03_06_0514 + 34450178-34450244,34450821-34451047,34451140-344512...    29   6.6  
08_02_0650 - 19708479-19710507,19711033-19711889                       28   8.7  

>10_08_0789 +
           20569738-20570207,20573425-20573464,20573484-20573536,
           20573633-20574212,20574323-20575384,20575631-20575813,
           20576112-20576199,20576285-20576532,20576712-20577053,
           20579026-20579163,20579521-20579547
          Length = 1076

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = +1

Query: 229 GIEEKVQQLTDITAKKSVIPLNI 297
           G+E+ VQQLT IT  K V+PL I
Sbjct: 497 GLEDNVQQLTIITRVKEVLPLMI 519


>03_06_0514 +
           34450178-34450244,34450821-34451047,34451140-34451275,
           34451818-34451951,34452037-34452142,34452602-34452687,
           34453204-34453365,34453918-34454034,34454222-34454464
          Length = 425

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 407 MNICWWPTHLDSQLL 451
           +++CWWP H  S LL
Sbjct: 8   LSVCWWPPHFKSPLL 22


>08_02_0650 - 19708479-19710507,19711033-19711889
          Length = 961

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 13/49 (26%), Positives = 21/49 (42%)
 Frame = +1

Query: 403 NDEYLLVANSFRFSAAYNNKLFFGIVDXDEGSXIFQMLRLNTAPVIMHF 549
           N  Y +V +     AA+ + L F   + +  S I    R+N   +  HF
Sbjct: 284 NSRYFIVIDDIWDKAAWRDHLRFAFPENNSASRIITTTRINDVAIACHF 332


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,533,291
Number of Sequences: 37544
Number of extensions: 278971
Number of successful extensions: 470
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 469
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)