Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_L17
(960 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 32 0.59
02_01_0003 + 13079-13610,14005-14312,14364-14549,14620-14707,148... 31 1.4
07_01_0080 + 587674-588510 31 1.8
03_01_0515 - 3864796-3865425 30 2.4
03_03_0038 + 13984525-13984917,13985351-13985429,13985535-139856... 25 3.1
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 30 3.1
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 30 3.1
02_04_0021 + 18975992-18976408 30 3.1
11_06_0610 - 25449085-25453284 29 4.2
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 4.2
04_03_0742 + 19200045-19200053,19200158-19200437,19201331-192015... 29 5.5
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 29 5.5
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996... 29 7.3
03_05_0781 + 27654764-27655429,27655902-27656004,27656535-276565... 23 8.4
12_02_0299 - 17051570-17052474,17053542-17053755 28 9.6
03_02_0738 - 10824121-10825572 28 9.6
01_01_0070 - 542603-542686,542803-543441 28 9.6
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 32.3 bits (70), Expect = 0.59
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 720 PPGPFKKXXXXSPPGNPPPXXPXXSPPXP 806
PP P K PP PPP P PP P
Sbjct: 328 PPPPPKAAPPPPPPKGPPPPPPAKGPPPP 356
Score = 29.1 bits (62), Expect = 5.5
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 720 PPGPFKKXXXXSPPGNPPPXXPXXSPPXP 806
P GP PP PPP P PP P
Sbjct: 341 PKGPPPPPPAKGPPPPPPPKGPSPPPPPP 369
Score = 28.3 bits (60), Expect = 9.6
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Frame = +2
Query: 608 PHPPKSPXXXXXFXKGXPP---PXGPF*KKXXPPFXXXGNPP 724
P PPK P KG PP P GP PP G PP
Sbjct: 338 PPPPKGPPPPPP-AKGPPPPPPPKGPSPPPPPPPGGKKGGPP 378
>02_01_0003 +
13079-13610,14005-14312,14364-14549,14620-14707,
14807-14887,14980-15044,15357-15497,15578-15694,
15995-16237,16326-16383,18127-18224
Length = 638
Score = 31.1 bits (67), Expect = 1.4
Identities = 16/31 (51%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = -3
Query: 799 GGXKXGXXGGGFPGGEXXXXFLKG-PGGVSP 710
GG G GGGFPGG F G PGG P
Sbjct: 530 GGFPGGMPGGGFPGGMPGGGFPGGMPGGGFP 560
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/28 (53%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -3
Query: 799 GGXKXGXXGGGFPGGEXXXXFLKG-PGG 719
GG G GGGFPGG F G PGG
Sbjct: 539 GGFPGGMPGGGFPGGMPGGGFPGGMPGG 566
>07_01_0080 + 587674-588510
Length = 278
Score = 30.7 bits (66), Expect = 1.8
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 720 PPGPFKKXXXXSPPGNPPPXXPXXSPPXP 806
PP P SPP PPP P PP P
Sbjct: 92 PPPPPPPPSSGSPPPPPPPPPPPPPPPPP 120
Score = 28.7 bits (61), Expect = 7.3
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 720 PPGPFKKXXXXSPPGNPPPXXPXXSPPXP 806
PP P PP PPP P PP P
Sbjct: 93 PPPPPPPSSGSPPPPPPPPPPPPPPPPPP 121
Score = 25.4 bits (53), Expect(2) = 8.7
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 419 VGGFXXXKKPPPPPP 375
+GG ++PPPPPP
Sbjct: 82 LGGDGMFRRPPPPPP 96
Score = 21.4 bits (43), Expect(2) = 8.7
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -2
Query: 392 PPPPPPXXXKK 360
PPPPPP ++
Sbjct: 116 PPPPPPLFTRR 126
>03_01_0515 - 3864796-3865425
Length = 209
Score = 30.3 bits (65), Expect = 2.4
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 720 PPGPFKKXXXXSPPGNPPPXXPXXSPPXP 806
PP P PP PPP P SPP P
Sbjct: 74 PPPPSVTSSPPPPPLPPPPPPPAASPPPP 102
Score = 28.7 bits (61), Expect = 7.3
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +3
Query: 720 PPGPFKKXXXXSPPGNPPPXXPXXSPPXP 806
PP P PP +PPP P S P P
Sbjct: 90 PPPPPPAASPPPPPPSPPPPSPVKSSPPP 118
>03_03_0038 +
13984525-13984917,13985351-13985429,13985535-13985628,
13985712-13985844
Length = 232
Score = 25.4 bits (53), Expect(2) = 3.1
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 392 PPPPPPXXXKKKR 354
PPPPPP K KR
Sbjct: 82 PPPPPPKQEKAKR 94
Score = 23.0 bits (47), Expect(2) = 3.1
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 395 KPPPPPP 375
KPPPPPP
Sbjct: 37 KPPPPPP 43
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 29.9 bits (64), Expect = 3.1
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +3
Query: 711 GETPPGPFKKXXXXSPPGNPPPXXPXXSPP 800
G+ PP P PP PPP P PP
Sbjct: 137 GQEPPPPHVPKAAPPPPPPPPPHAPPGPPP 166
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 714 ETPPGPFKKXXXXSPPGNPPPXXPXXSPPXP 806
E PP P PP PPP P PP P
Sbjct: 423 ELPPPPPLPPPPPPPPPPPPPLPPNMPPPLP 453
>02_04_0021 + 18975992-18976408
Length = 138
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 717 TPPGPFKKXXXXSPPGNPPPXXPXXSPPXP 806
TPP P K P P P P SPP P
Sbjct: 96 TPPPPKPKPTPPPPAPTPKPPAPSPSPPPP 125
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 714 ETPPGPFKKXXXXSPPGNPPPXXPXXSPPXP 806
++PP P P +PPP P SPP P
Sbjct: 1182 KSPPPPAPVILPPPPVKSPPPPAPVISPPPP 1212
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 714 ETPPGPFKKXXXXSPPGNPPPXXPXXSPPXP 806
++PP P P +PPP P SPP P
Sbjct: 1214 KSPPPPAPVILPPPPVKSPPPPAPVISPPPP 1244
Score = 29.1 bits (62), Expect = 5.5
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 714 ETPPGPFKKXXXXSPPGNPPPXXPXXSPPXP 806
++PP P P +PPP P SPP P
Sbjct: 1150 KSPPPPAPVILPPPPIKSPPPPAPVISPPPP 1180
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +3
Query: 720 PPGPFKKXXXXSPPGNPPPXXPXXSPPXP 806
PP P+ PP PPP P S P P
Sbjct: 95 PPPPYGVNSSQPPPPPPPPPSPPPSAPPP 123
>04_03_0742 +
19200045-19200053,19200158-19200437,19201331-19201545,
19201705-19201792,19202277-19202842
Length = 385
Score = 29.1 bits (62), Expect = 5.5
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +3
Query: 711 GETPPGPFKKXXXXSPPGNPPPXXPXXSPPXP 806
G PPGP PP PPP P PP P
Sbjct: 333 GYYPPGPGYAYPPPYPPSYPPPYQPSY-PPYP 363
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 29.1 bits (62), Expect = 5.5
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +3
Query: 717 TPPGPFKKXXXXSPPGNPPPXXPXXSPPXP 806
T P P +PP PPP P PP P
Sbjct: 336 TSPSPRPVQPSNAPPPPPPPPPPPPPPPPP 365
>10_06_0039 -
9966744-9967535,9968241-9968482,9969021-9969223,
9969333-9970645
Length = 849
Score = 28.7 bits (61), Expect = 7.3
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 753 SPPGNPPPXXPXXSPP 800
SPP NPPP P PP
Sbjct: 322 SPPSNPPPAPPPPPPP 337
>03_05_0781 +
27654764-27655429,27655902-27656004,27656535-27656590,
27656895-27657059,27657078-27657083,27657657-27657770,
27658170-27658262
Length = 400
Score = 23.4 bits (48), Expect(2) = 8.4
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 416 GGFXXXKKPPPPP 378
GG K PPPPP
Sbjct: 29 GGIFLLKPPPPPP 41
Score = 23.4 bits (48), Expect(2) = 8.4
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -2
Query: 395 KPPPPPPXXXKK 360
KPPPPPP ++
Sbjct: 35 KPPPPPPFPSRR 46
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 28.3 bits (60), Expect = 9.6
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +3
Query: 723 PGPFKKXXXXSPPGNPPPXXPXXSPPXP 806
P P +PP PPP P PP P
Sbjct: 241 PFPLPPIPFLTPPSPPPPAFPFPLPPWP 268
>03_02_0738 - 10824121-10825572
Length = 483
Score = 28.3 bits (60), Expect = 9.6
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +3
Query: 717 TPPGPFKKXXXXSPPGNPPPXXPXXSPPXP 806
+PP P P PPP P SPP P
Sbjct: 77 SPPPPSPPSSSPPPLSFPPPPPPPSSPPPP 106
>01_01_0070 - 542603-542686,542803-543441
Length = 240
Score = 28.3 bits (60), Expect = 9.6
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +3
Query: 714 ETPPGPFKKXXXXSPPGNPPPXXPXXSPPXP 806
+ PP P PP PPP P + P P
Sbjct: 89 KAPPPPVTPPPVTPPPVTPPPVSPPPATPPP 119
Score = 28.3 bits (60), Expect = 9.6
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +3
Query: 717 TPPGPFKKXXXXSPPGNPPPXXPXXSPP 800
TPP P PP PPP P +PP
Sbjct: 101 TPP-PVTPPPVSPPPATPPPALPPSTPP 127
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,701,623
Number of Sequences: 37544
Number of extensions: 349422
Number of successful extensions: 4429
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4020
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2776393380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -