Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_L17
         (960 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical pr...    32   0.70 
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr...    31   1.6  
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr...    31   1.6  
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p...    31   1.6  
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p...    31   1.6  
AF000298-11|AAM97960.1|  518|Caenorhabditis elegans Prion-like-(...    29   4.9  
AF000298-10|AAM97961.1|  539|Caenorhabditis elegans Prion-like-(...    29   4.9  
AF000298-8|AAC48255.2|  524|Caenorhabditis elegans Prion-like-(q...    29   4.9  
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ...    29   6.5  

>U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical
           protein R04E5.8a protein.
          Length = 997

 Score = 31.9 bits (69), Expect = 0.70
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +3

Query: 720 PPGPFKKXXXXSPPGNPPPXXPXXSPPXP 806
           PP P  +     PP +PPP  P  +PP P
Sbjct: 139 PPPPPPRVPRTPPPRSPPPRRPPMTPPSP 167


>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
           protein F53B7.5b protein.
          Length = 2892

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +1

Query: 361 FXXXXGGGGGGFXXFXXPPTP 423
           F    GGGGGG   F  PPTP
Sbjct: 335 FPGGGGGGGGGLDPFTFPPTP 355


>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
           protein F53B7.5a protein.
          Length = 3095

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +1

Query: 361 FXXXXGGGGGGFXXFXXPPTP 423
           F    GGGGGG   F  PPTP
Sbjct: 335 FPGGGGGGGGGLDPFTFPPTP 355


>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
           protein F53B7.5b protein.
          Length = 2892

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +1

Query: 361 FXXXXGGGGGGFXXFXXPPTP 423
           F    GGGGGG   F  PPTP
Sbjct: 335 FPGGGGGGGGGLDPFTFPPTP 355


>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
           protein F53B7.5a protein.
          Length = 3095

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +1

Query: 361 FXXXXGGGGGGFXXFXXPPTP 423
           F    GGGGGG   F  PPTP
Sbjct: 335 FPGGGGGGGGGLDPFTFPPTP 355


>AF000298-11|AAM97960.1|  518|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform b protein.
          Length = 518

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +3

Query: 717 TPPGPFKKXXXXSPPGNPPPXXPXXSPPXP 806
           +PP P        P G+PPP     SPP P
Sbjct: 263 SPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292


>AF000298-10|AAM97961.1|  539|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform c protein.
          Length = 539

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +3

Query: 717 TPPGPFKKXXXXSPPGNPPPXXPXXSPPXP 806
           +PP P        P G+PPP     SPP P
Sbjct: 284 SPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313


>AF000298-8|AAC48255.2|  524|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform a protein.
          Length = 524

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +3

Query: 717 TPPGPFKKXXXXSPPGNPPPXXPXXSPPXP 806
           +PP P        P G+PPP     SPP P
Sbjct: 269 SPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298


>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
           protein Y48G9A.4 protein.
          Length = 1115

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = +3

Query: 720 PPGPFKKXXXXSPPGNPPPXXPXXSPPXP 806
           PP P  +    +PP  PPP      PP P
Sbjct: 564 PPPPLPQNLSGAPPPPPPPPPMLGGPPPP 592


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,317,257
Number of Sequences: 27780
Number of extensions: 203967
Number of successful extensions: 1684
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1535
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2496624284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)