Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_L16
         (925 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q24154 Cluster: 60S ribosomal protein L29; n=12; Endopt...    49   1e-04
UniRef50_A2I402 Cluster: Ribosomal protein L29e-like protein; n=...    49   2e-04
UniRef50_Q0IFR8 Cluster: Putative uncharacterized protein; n=1; ...    44   0.004
UniRef50_Q92366 Cluster: 60S ribosomal protein L29; n=40; Eukary...    44   0.007
UniRef50_P47914 Cluster: 60S ribosomal protein L29; n=251; Eukar...    44   0.007
UniRef50_UPI0000F2DCEB Cluster: PREDICTED: similar to ribosomal ...    43   0.013
UniRef50_Q84WM0 Cluster: 60S ribosomal protein L29-2; n=4; Arabi...    41   0.051
UniRef50_Q7QPW0 Cluster: GLP_433_2266_2454; n=2; Eukaryota|Rep: ...    37   0.63 
UniRef50_UPI0000F2CE67 Cluster: PREDICTED: similar to ribosomal ...    36   1.5  
UniRef50_Q4PEG3 Cluster: Putative uncharacterized protein; n=2; ...    36   1.5  
UniRef50_Q54TW3 Cluster: Ribosomal protein L29; n=1; Dictyosteli...    35   3.4  

>UniRef50_Q24154 Cluster: 60S ribosomal protein L29; n=12;
           Endopterygota|Rep: 60S ribosomal protein L29 -
           Drosophila melanogaster (Fruit fly)
          Length = 76

 Score = 49.2 bits (112), Expect = 1e-04
 Identities = 24/50 (48%), Positives = 28/50 (56%)
 Frame = -2

Query: 369 MAKSKNHTNXNXNRPVVXNGVLKPXXSRXESTPGGXAXFFRXQRXXXKGD 220
           MAKSKNHTN N N+    NG+ +P   R EST G    F   QR   KG+
Sbjct: 1   MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQRYARKGN 50


>UniRef50_A2I402 Cluster: Ribosomal protein L29e-like protein; n=2;
           Neoptera|Rep: Ribosomal protein L29e-like protein -
           Maconellicoccus hirsutus (hibiscus mealybug)
          Length = 90

 Score = 48.8 bits (111), Expect = 2e-04
 Identities = 25/50 (50%), Positives = 28/50 (56%)
 Frame = -2

Query: 369 MAKSKNHTNXNXNRPVVXNGVLKPXXSRXESTPGGXAXFFRXQRXXXKGD 220
           MAKSKNHTN N NR    NG+ KP   R ES  G    F + QR   KG+
Sbjct: 1   MAKSKNHTNHNQNRKDHRNGIKKPKRYRYESKLGVCQKFLKNQRFALKGN 50


>UniRef50_Q0IFR8 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 97

 Score = 44.4 bits (100), Expect = 0.004
 Identities = 20/34 (58%), Positives = 22/34 (64%)
 Frame = -2

Query: 369 MAKSKNHTNXNXNRPVVXNGVLKPXXSRXESTPG 268
           MAKSKNHTN N N+    NG+ KP   R EST G
Sbjct: 1   MAKSKNHTNHNQNQKAHKNGITKPKRQRNESTRG 34


>UniRef50_Q92366 Cluster: 60S ribosomal protein L29; n=40;
           Eukaryota|Rep: 60S ribosomal protein L29 -
           Schizosaccharomyces pombe (Fission yeast)
          Length = 61

 Score = 43.6 bits (98), Expect = 0.007
 Identities = 21/49 (42%), Positives = 27/49 (55%)
 Frame = -2

Query: 369 MAKSKNHTNXNXNRPVVXNGVLKPXXSRXESTPGGXAXFFRXQRXXXKG 223
           MAKSKNHTN N N+    NG+ +P   R +S     A F R Q+   +G
Sbjct: 1   MAKSKNHTNHNQNKKAHRNGIKRPQKHRYDSLKYRDAKFRRNQKFANRG 49


>UniRef50_P47914 Cluster: 60S ribosomal protein L29; n=251;
           Eukaryota|Rep: 60S ribosomal protein L29 - Homo sapiens
           (Human)
          Length = 159

 Score = 43.6 bits (98), Expect = 0.007
 Identities = 23/52 (44%), Positives = 26/52 (50%)
 Frame = -2

Query: 369 MAKSKNHTNXNXNRPVVXNGVLKPXXSRXESTPGGXAXFFRXQRXXXKGDXK 214
           MAKSKNHT  N +R    NG+ KP   R ES  G    F R  R   K + K
Sbjct: 1   MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKK 52


>UniRef50_UPI0000F2DCEB Cluster: PREDICTED: similar to ribosomal
           protein L29,; n=3; Monodelphis domestica|Rep: PREDICTED:
           similar to ribosomal protein L29, - Monodelphis
           domestica
          Length = 407

 Score = 42.7 bits (96), Expect = 0.013
 Identities = 23/52 (44%), Positives = 25/52 (48%)
 Frame = -2

Query: 369 MAKSKNHTNXNXNRPVVXNGVLKPXXSRXESTPGGXAXFFRXQRXXXKGDXK 214
           MAKSKNHT  N +R    NG+ KP   R ES  G    F R  R   K   K
Sbjct: 1   MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHKKK 52


>UniRef50_Q84WM0 Cluster: 60S ribosomal protein L29-2; n=4;
           Arabidopsis thaliana|Rep: 60S ribosomal protein L29-2 -
           Arabidopsis thaliana (Mouse-ear cress)
          Length = 61

 Score = 40.7 bits (91), Expect = 0.051
 Identities = 22/52 (42%), Positives = 25/52 (48%)
 Frame = -2

Query: 369 MAKSKNHTNXNXNRPVVXNGVLKPXXSRXESTPGGXAXFFRXQRXXXKGDXK 214
           MAKSKNHT  N +     NG+ KP   R   T G    F R QR   K + K
Sbjct: 1   MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVK 52


>UniRef50_Q7QPW0 Cluster: GLP_433_2266_2454; n=2; Eukaryota|Rep:
           GLP_433_2266_2454 - Giardia lamblia ATCC 50803
          Length = 62

 Score = 37.1 bits (82), Expect = 0.63
 Identities = 20/52 (38%), Positives = 24/52 (46%)
 Frame = -2

Query: 369 MAKSKNHTNXNXNRPVVXNGVLKPXXSRXESTPGGXAXFFRXQRXXXKGDXK 214
           MAK KNHT+ N NR    NG+ KP  S   S  G    + R  R     D +
Sbjct: 1   MAKLKNHTSKNQNRKDHRNGIKKPKKSAYTSHKGMCPKYLRNLRRSRANDPR 52


>UniRef50_UPI0000F2CE67 Cluster: PREDICTED: similar to ribosomal
           protein L29/cell surface heparin binding protein HIP;
           n=4; Monodelphis domestica|Rep: PREDICTED: similar to
           ribosomal protein L29/cell surface heparin binding
           protein HIP - Monodelphis domestica
          Length = 252

 Score = 35.9 bits (79), Expect = 1.5
 Identities = 18/41 (43%), Positives = 21/41 (51%)
 Frame = -2

Query: 369 MAKSKNHTNXNXNRPVVXNGVLKPXXSRXESTPGGXAXFFR 247
           MAKSKNHT  N +R    NG+ KP   + ES       F R
Sbjct: 1   MAKSKNHTTHNQSRKWHRNGIKKPRSLKYESLKEADPKFLR 41


>UniRef50_Q4PEG3 Cluster: Putative uncharacterized protein; n=2;
           Eukaryota|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 282

 Score = 35.9 bits (79), Expect = 1.5
 Identities = 20/52 (38%), Positives = 24/52 (46%)
 Frame = -2

Query: 369 MAKSKNHTNXNXNRPVVXNGVLKPXXSRXESTPGGXAXFFRXQRXXXKGDXK 214
           MAKSKN +  N  R    NG+ KP  ++  S  G    F R QR    G  K
Sbjct: 94  MAKSKNSSQHNQVRKAHRNGIKKPKTNKYPSLRGVDPKFVRNQRYAKHGTEK 145


>UniRef50_Q54TW3 Cluster: Ribosomal protein L29; n=1; Dictyostelium
           discoideum AX4|Rep: Ribosomal protein L29 -
           Dictyostelium discoideum AX4
          Length = 93

 Score = 34.7 bits (76), Expect = 3.4
 Identities = 18/44 (40%), Positives = 23/44 (52%)
 Frame = -2

Query: 369 MAKSKNHTNXNXNRPVVXNGVLKPXXSRXESTPGGXAXFFRXQR 238
           MAKSKNH+  + NR    NG+ K    +  S+ G    F R QR
Sbjct: 1   MAKSKNHSTHHKNRKDHRNGIKKAVVHKKTSSKGVELGFARNQR 44


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 533,079,031
Number of Sequences: 1657284
Number of extensions: 7158264
Number of successful extensions: 4119
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4084
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 84851082477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)