Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_L16
         (925 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_02_0115 - 11248021-11248101,11249017-11249118                       43   4e-04
05_03_0661 - 16726958-16726966,16727133-16727234                       35   0.079

>01_02_0115 - 11248021-11248101,11249017-11249118
          Length = 60

 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 23/52 (44%), Positives = 26/52 (50%)
 Frame = -2

Query: 369 MAKSKNHTNXNXNRPVVXNGVLKPXXSRXESTPGGXAXFFRXQRXXXKGDXK 214
           MAKSKNHT  N +     NG+ KP   R  ST G    F R QR   K + K
Sbjct: 1   MAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNQRYSRKHNKK 52


>05_03_0661 - 16726958-16726966,16727133-16727234
          Length = 36

 Score = 35.1 bits (77), Expect = 0.079
 Identities = 17/34 (50%), Positives = 19/34 (55%)
 Frame = -2

Query: 369 MAKSKNHTNXNXNRPVVXNGVLKPXXSRXESTPG 268
           MAKSKNHT  N +     NG+ KP   R  ST G
Sbjct: 1   MAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKG 34


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,539,313
Number of Sequences: 37544
Number of extensions: 262403
Number of successful extensions: 164
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 163
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)