Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_L16
         (925 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82256-2|CAB05115.1|   62|Caenorhabditis elegans Hypothetical pr...    41   0.001
AL032657-13|CAB76744.1|   87|Caenorhabditis elegans Hypothetical...    32   0.50 
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    31   0.88 
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    31   0.88 
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    31   0.88 
AL032625-6|CAN86641.1|  167|Caenorhabditis elegans Hypothetical ...    29   6.2  

>Z82256-2|CAB05115.1|   62|Caenorhabditis elegans Hypothetical
           protein B0513.3 protein.
          Length = 62

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 21/52 (40%), Positives = 26/52 (50%)
 Frame = -2

Query: 369 MAKSKNHTNXNXNRPVVXNGVLKPXXSRXESTPGGXAXFFRXQRXXXKGDXK 214
           MAKSKNHTN N N+    NG+ KP      S  G  A F +  R   K + +
Sbjct: 1   MAKSKNHTNHNQNKKAHRNGITKPKKHIFLSMKGVDAKFIKNLRFSRKNNKR 52


>AL032657-13|CAB76744.1|   87|Caenorhabditis elegans Hypothetical
           protein Y47H9C.14 protein.
          Length = 87

 Score = 32.3 bits (70), Expect = 0.50
 Identities = 16/50 (32%), Positives = 21/50 (42%)
 Frame = -2

Query: 363 KSKNHTNXNXNRPVVXNGVLKPXXSRXESTPGGXAXFFRXQRXXXKGDXK 214
           K +NHTN N N     NG+ KP      S  G    F +  R   K + +
Sbjct: 14  KPENHTNHNRNNKAHRNGITKPKKHIFLSIEGSRRQFIKSLRFFRKNNKR 63


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 31.5 bits (68), Expect = 0.88
 Identities = 17/45 (37%), Positives = 18/45 (40%)
 Frame = -1

Query: 841 PXGXPPLFXGXNITPPXGGGKXXXPXPXXPXXXGXFXGGKXKXGP 707
           P G PP+  G    PP  GG    P P  P   G F GG     P
Sbjct: 748 PGGLPPISGGPPPPPPPPGG---CPPPPPPPPPGGFKGGPPPPPP 789


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 31.5 bits (68), Expect = 0.88
 Identities = 17/45 (37%), Positives = 18/45 (40%)
 Frame = -1

Query: 841 PXGXPPLFXGXNITPPXGGGKXXXPXPXXPXXXGXFXGGKXKXGP 707
           P G PP+  G    PP  GG    P P  P   G F GG     P
Sbjct: 748 PGGLPPISGGPPPPPPPPGG---CPPPPPPPPPGGFKGGPPPPPP 789


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 31.5 bits (68), Expect = 0.88
 Identities = 17/45 (37%), Positives = 18/45 (40%)
 Frame = -1

Query: 841 PXGXPPLFXGXNITPPXGGGKXXXPXPXXPXXXGXFXGGKXKXGP 707
           P G PP+  G    PP  GG    P P  P   G F GG     P
Sbjct: 331 PGGLPPISGGPPPPPPPPGG---CPPPPPPPPPGGFKGGPPPPPP 372


>AL032625-6|CAN86641.1|  167|Caenorhabditis elegans Hypothetical
           protein Y37H9A.5 protein.
          Length = 167

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -2

Query: 363 KSKNHTNXNXNRPVVXNGVLKP 298
           KSKNHTN N N      G+ KP
Sbjct: 80  KSKNHTNHNQNNTAHRIGITKP 101


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,128,150
Number of Sequences: 27780
Number of extensions: 180986
Number of successful extensions: 109
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 97
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)