Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_L13
         (894 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88176-4|ABB51191.1|  427|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z81581-6|CAB04666.1|  679|Caenorhabditis elegans Hypothetical pr...    29   5.9  

>U88176-4|ABB51191.1|  427|Caenorhabditis elegans Hypothetical
           protein F18F11.3 protein.
          Length = 427

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = +1

Query: 622 EHIK--EASGRILLEKRQAQDAMELLKLYHQSVSNG 723
           EH+K    SG +LL+K    DA+  ++LY  S  NG
Sbjct: 288 EHLKIDSKSGNVLLKKLPTDDALITVELYATSSKNG 323


>Z81581-6|CAB04666.1|  679|Caenorhabditis elegans Hypothetical
           protein T02E1.3b protein.
          Length = 679

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = -3

Query: 754 SPALGKTRLLDHWRHS 707
           +PAL KT++ DHWR S
Sbjct: 66  NPALRKTKICDHWRRS 81


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,353,690
Number of Sequences: 27780
Number of extensions: 444020
Number of successful extensions: 1161
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1161
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)