Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_L11
         (894 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41749-1|AAB52488.2|  248|Caenorhabditis elegans Dehydrogenases,...    32   0.48 
Z68880-9|CAA93099.1|  255|Caenorhabditis elegans Hypothetical pr...    31   0.84 
Z68879-12|CAA93091.1|  255|Caenorhabditis elegans Hypothetical p...    31   0.84 
Z22181-3|CAA80181.3|  416|Caenorhabditis elegans Hypothetical pr...    31   0.84 
Z81051-6|CAB02867.1|  251|Caenorhabditis elegans Hypothetical pr...    29   5.9  
Z68299-3|CAA92612.1|  262|Caenorhabditis elegans Hypothetical pr...    28   7.8  
AF039042-13|AAR12988.1|  249|Caenorhabditis elegans Hypothetical...    28   7.8  
AF016668-1|AAB66092.1|  257|Caenorhabditis elegans Dehydrogenase...    28   7.8  

>U41749-1|AAB52488.2|  248|Caenorhabditis elegans Dehydrogenases,
           short chain protein25 protein.
          Length = 248

 Score = 32.3 bits (70), Expect = 0.48
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = +2

Query: 248 NTFVSFAGQHGDYKVSKVALSALTFVQQRQFTEQGKDISVNCVHPGFIKTDMTKGM 415
           ++ V   G  G    +      + F +        K++ VN V PGFIKT MT+ M
Sbjct: 142 SSIVGKMGNFGQTNYAATKAGVIGFTKSAAKELAKKNVRVNAVLPGFIKTPMTEAM 197


>Z68880-9|CAA93099.1|  255|Caenorhabditis elegans Hypothetical
           protein K08F4.9 protein.
          Length = 255

 Score = 31.5 bits (68), Expect = 0.84
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +2

Query: 284 YKVSKVALSALTFVQQRQFTEQGKDISVNCVHPGFIKTDM 403
           YK+SKVA+ + +      F      + +  +HPG+++TDM
Sbjct: 175 YKMSKVAMLSFSRSMAADFKRLEIPVLITNIHPGWVQTDM 214


>Z68879-12|CAA93091.1|  255|Caenorhabditis elegans Hypothetical
           protein K08F4.9 protein.
          Length = 255

 Score = 31.5 bits (68), Expect = 0.84
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +2

Query: 284 YKVSKVALSALTFVQQRQFTEQGKDISVNCVHPGFIKTDM 403
           YK+SKVA+ + +      F      + +  +HPG+++TDM
Sbjct: 175 YKMSKVAMLSFSRSMAADFKRLEIPVLITNIHPGWVQTDM 214


>Z22181-3|CAA80181.3|  416|Caenorhabditis elegans Hypothetical
           protein ZK632.4 protein.
          Length = 416

 Score = 31.5 bits (68), Expect = 0.84
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = -2

Query: 629 KGN--YIFKFLKCV*HLSQDYHVCKTNNLMIGLFNRPNLLDDNHATQMCLSVTE 474
           KGN  ++FK L  +  LS   H  K    ++   +  N  DDNH  ++ +++TE
Sbjct: 80  KGNLSFLFKVLSVLGPLSIQIHPTKEQGKLLHATDPKNYPDDNHKPEIAIALTE 133


>Z81051-6|CAB02867.1|  251|Caenorhabditis elegans Hypothetical
           protein C55A6.7 protein.
          Length = 251

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
 Frame = +2

Query: 179 DDLTVEE--ILQFVNDFLTAVKGGKNTFVSFAGQHGDYKVSKVALSALTFVQQRQFTEQG 352
           D L+V    I+   ++FL ++   +NT  S   +   Y+++K A++   F +      + 
Sbjct: 138 DTLSVSRGAIINIASEFLGSIS--ENTSGSGEYKAMAYRMTKCAVNQ--FTKTLSIDLKD 193

Query: 353 KDISVNCVHPGFIKTDMTKGMGDFEPERGA 442
             I    + PG ++TDM+KG G    E  +
Sbjct: 194 DHILTAGICPGMVQTDMSKGKGQLTIEESS 223


>Z68299-3|CAA92612.1|  262|Caenorhabditis elegans Hypothetical
           protein T04B2.6 protein.
          Length = 262

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = +2

Query: 284 YKVSKVALSALTFVQQRQFTEQGKDISVNCVHPGFIKTDMTKGMGDFEPERGA 442
           YK+SKVA+ +        F      + +  +HPG++ T+M     +   E  A
Sbjct: 174 YKMSKVAMLSFARSLASDFRTLNIPVLIATIHPGWVLTEMGGSDAEITVEESA 226


>AF039042-13|AAR12988.1|  249|Caenorhabditis elegans Hypothetical
           protein ZK697.14 protein.
          Length = 249

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
 Frame = +2

Query: 272 QHGDYKVSKVALSALTFVQQRQFTEQGK-DISVNCVHPGFIKTDMTKGMGDFEPERGARA 448
           Q G Y   +++ SAL    +    E  K  I V  + PG++KTDM    G  E +     
Sbjct: 164 QPGIYIAYRMSKSALNSFSKSCSVELAKYHILVTAMCPGWVKTDMGGENGWEEVDDATEK 223

Query: 449 PLYLALEAPQSQKGTFV 499
            +   L+   +Q G F+
Sbjct: 224 IMKSILKLGAAQHGAFI 240


>AF016668-1|AAB66092.1|  257|Caenorhabditis elegans Dehydrogenases,
           short chain protein13 protein.
          Length = 257

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
 Frame = +2

Query: 125 WGLLSNIRKQVWLDTLVKDDLTVEEILQFVND---FLTAVKGGKNTFVS-FAG-----QH 277
           +G L  +    W D L+  DL V+   +   +    L A   G   FVS  AG     + 
Sbjct: 102 YGDLMKVTDSQW-DKLL--DLNVKSAFELTKEAVPHLEASGRGNVVFVSSVAGYSPMNEI 158

Query: 278 GDYKVSKVALSALTFVQQRQFTEQGKDISVNCVHPGFIKTDMTKGMGDFEPER 436
           G Y V K  L+ L+  +        ++I VN + PG I+TD ++ +   E E+
Sbjct: 159 GAYSVMKTTLTGLS--KSLALNLARRNIRVNSIAPGIIQTDFSQVLFSDESEK 209


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,359,391
Number of Sequences: 27780
Number of extensions: 387210
Number of successful extensions: 809
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)