Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_L08
         (926 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0661 - 18468244-18469580,18469610-18469619                       30   3.0  
10_08_0460 - 18098187-18098248,18098331-18098399,18098468-180994...    29   4.0  
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277...    29   5.2  

>04_03_0661 - 18468244-18469580,18469610-18469619
          Length = 448

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
 Frame = +1

Query: 223 QPTTLQEAINIIKFLKTSHKQEIAKLKETFAKQAEVIKKLETNRKKELEFLSSELQKYEV 402
           Q   LQE    +++ +     + A  K+   ++ +  +K E  R+KE ++L+ ++Q+ E 
Sbjct: 52  QNAKLQEKAKKVEYARVRTLVDNAYKKDPRIQRRKEEEKAEKQRRKEAKYLAKKMQEEEA 111

Query: 403 NLAL-----RTETVAQQLAQKDLTIEKQXXKKK 486
             A      R E  A++ A+  L  +K   K+K
Sbjct: 112 ARAAEEERKRKEEEAKRAAEAALNQKKLKEKEK 144


>10_08_0460 -
           18098187-18098248,18098331-18098399,18098468-18099434,
           18100089-18100808,18100942-18101031,18101076-18101138,
           18101223-18101366,18101471-18101527,18101606-18101680,
           18101757-18101836,18101937-18102050,18102166-18102258,
           18102470-18102553,18102812-18102859,18105207-18105337,
           18105903-18106135
          Length = 1009

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = +1

Query: 316 KQAEVIKKLETNRKKELEFLSSELQKYEVNLALRTETVAQQLAQKD 453
           K A++  K  + RK+  +F+  EL+K E+N+ L  E  A+    +D
Sbjct: 859 KGADIASKA-SKRKRTYQFMMEELEKLEMNVQLMIEQEAETHLSQD 903


>04_04_1144 +
           31222556-31222633,31223238-31227665,31227724-31227789,
           31227790-31228014,31228097-31228255,31228393-31228551,
           31228855-31229013,31229371-31229490,31229604-31229825
          Length = 1871

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 22/87 (25%), Positives = 43/87 (49%)
 Frame = +1

Query: 208 KENLLQPTTLQEAINIIKFLKTSHKQEIAKLKETFAKQAEVIKKLETNRKKELEFLSSEL 387
           KE   Q ++LQE I   +     H+Q    L+ T ++   V + LE + K +++ L  +L
Sbjct: 230 KEMEAQISSLQEEIKGHQDKAIDHQQVEESLRSTLSELKMVQEALELS-KSQVDDLEQKL 288

Query: 388 QKYEVNLALRTETVAQQLAQKDLTIEK 468
              + N++  TE ++   + ++   EK
Sbjct: 289 ASQDANISHLTEELSLHRSSEESLKEK 315


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,991,709
Number of Sequences: 37544
Number of extensions: 199816
Number of successful extensions: 487
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 487
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2647531240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)