Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_L08
(926 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81111-6|CAB03269.1| 332|Caenorhabditis elegans Hypothetical pr... 33 0.29
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 33 0.29
Z78539-2|CAB01729.2| 410|Caenorhabditis elegans Hypothetical pr... 33 0.38
AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical ... 32 0.67
AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical ... 32 0.67
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 31 0.88
AF026207-1|AAB71266.1| 522|Caenorhabditis elegans Hypothetical ... 31 1.5
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical... 30 2.0
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 30 2.7
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 30 2.7
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 30 2.7
Z54284-3|CAA91063.1| 666|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 29 4.7
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 29 4.7
AF000262-5|AAN60522.1| 100|Caenorhabditis elegans Hypothetical ... 29 4.7
Z82264-3|CAB05166.1| 277|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z22176-5|CAA80134.1| 278|Caenorhabditis elegans Hypothetical pr... 28 8.2
AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric c... 28 8.2
>Z81111-6|CAB03269.1| 332|Caenorhabditis elegans Hypothetical
protein T01G5.7 protein.
Length = 332
Score = 33.1 bits (72), Expect = 0.29
Identities = 21/63 (33%), Positives = 34/63 (53%)
Frame = +1
Query: 235 LQEAINIIKFLKTSHKQEIAKLKETFAKQAEVIKKLETNRKKELEFLSSELQKYEVNLAL 414
L+ N+I L H+ I +++T A E K LETN+K +L F + Q ++N +L
Sbjct: 29 LEGQSNLISKLMKKHEANIPFIEDTMATDIE--KVLETNQKLQLAFAELDEQSEKIN-SL 85
Query: 415 RTE 423
T+
Sbjct: 86 ETQ 88
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 33.1 bits (72), Expect = 0.29
Identities = 24/83 (28%), Positives = 38/83 (45%)
Frame = +1
Query: 181 ETNMTENSTKENLLQPTTLQEAINIIKFLKTSHKQEIAKLKETFAKQAEVIKKLETNRKK 360
E ++TEN+T E + ++ +K K+E KL + ++ +KKLE KK
Sbjct: 226 EESITENTTAEVPASTASTKDTKLSVKIRSEDEKREEDKLSDD--EKPNYMKKLEEIYKK 283
Query: 361 ELEFLSSELQKYEVNLALRTETV 429
E E + EL + V E V
Sbjct: 284 EEELVERELAEMSVAEIFEKEVV 306
>Z78539-2|CAB01729.2| 410|Caenorhabditis elegans Hypothetical
protein C31E10.3 protein.
Length = 410
Score = 32.7 bits (71), Expect = 0.38
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +1
Query: 187 NMTENSTKENLLQPTTLQEAINIIKFLKTSHKQEIAKLKETFAKQAEV--IKKLETNRKK 360
N +E +T+ L PT + +I+ F T +K + KLK TF + + ++E K
Sbjct: 37 NKSEVTTETIELWPTNCTKVCSILTFTSTINKIPLEKLKTTFQNLTVLCGVLRIENTTLK 96
Query: 361 ELEFLSS 381
L FL +
Sbjct: 97 NLSFLEN 103
>AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical
protein C35E7.5b protein.
Length = 954
Score = 31.9 bits (69), Expect = 0.67
Identities = 20/70 (28%), Positives = 37/70 (52%)
Frame = +1
Query: 277 HKQEIAKLKETFAKQAEVIKKLETNRKKELEFLSSELQKYEVNLALRTETVAQQLAQKDL 456
H++ I+ L++ E +KK+ +R KE E L++EL+K +L E ++A+
Sbjct: 515 HREAISSLEKECNMHLESLKKMNDSR-KEFEVLNAELEKKVFDLKKVLEMEQGKIAEMLK 573
Query: 457 TIEKQXXKKK 486
E++ KK
Sbjct: 574 NKEREAAHKK 583
>AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical
protein C35E7.5a protein.
Length = 1262
Score = 31.9 bits (69), Expect = 0.67
Identities = 20/70 (28%), Positives = 37/70 (52%)
Frame = +1
Query: 277 HKQEIAKLKETFAKQAEVIKKLETNRKKELEFLSSELQKYEVNLALRTETVAQQLAQKDL 456
H++ I+ L++ E +KK+ +R KE E L++EL+K +L E ++A+
Sbjct: 515 HREAISSLEKECNMHLESLKKMNDSR-KEFEVLNAELEKKVFDLKKVLEMEQGKIAEMLK 573
Query: 457 TIEKQXXKKK 486
E++ KK
Sbjct: 574 NKEREAAHKK 583
>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1408
Score = 31.5 bits (68), Expect = 0.88
Identities = 28/105 (26%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
Frame = +1
Query: 178 RETNMTENSTKENLLQPTTLQEAINIIKFLKTSHKQEIAKLKETFAKQ-AEVIKKLETNR 354
+E N + +E L+ +E + I K + +Q+I +E K+ AE KK++ +
Sbjct: 955 KERNKEKVKAEEERLKAE--EEKVKIEKEKVKAEEQKIKAAEEERRKERAEDAKKVKEGQ 1012
Query: 355 KKELEFLSSELQ-KYEVNLALRTETVAQQLAQKDLTIEKQXXKKK 486
+K + L++++Q K + + A R + A+K L +EK+ K+K
Sbjct: 1013 EK-IAILNAKVQEKEDKSEARRKQKEMDNEAEKLLNVEKEKEKRK 1056
>AF026207-1|AAB71266.1| 522|Caenorhabditis elegans Hypothetical
protein H42K12.3 protein.
Length = 522
Score = 30.7 bits (66), Expect = 1.5
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Frame = +1
Query: 181 ETNMTENSTKENLLQPTTLQEAI---NIIKFLKTSHKQEIAKLKETF-AKQAEVIKKLET 348
ET E +T E TT +E + K +K ++I K + F +K E++KK ET
Sbjct: 288 ETTEEEVTTTEAPTTTTTTEEPTTEASAPKRIKAHLHKKIKKHPKNFGSKTYEILKKQET 347
Query: 349 NRKKELEFLSSELQKYEVNLALRTETVAQQ 438
+K ++EF E Q+ + A + + Q
Sbjct: 348 VKKSKIEFPEIEEQEITEDSADSSRAIEPQ 377
>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
protein Y26D4A.9 protein.
Length = 1435
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 280 KQEIAKLKETFAKQAEVIKKLETNRKKELE 369
K+E K+KE F K+ E +KK+E +K E
Sbjct: 741 KEEFQKVKEEFQKEVEKVKKVEKELEKAKE 770
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 29.9 bits (64), Expect = 2.7
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Frame = +1
Query: 241 EAINIIKFLKTSHKQEIAKLKETFAKQAEVIKKLETNRKKELEFLSSELQKYEVNLA--- 411
EA + K + + KQ++ T AE +K LE +KK+ E S E QK + LA
Sbjct: 9889 EADAVKKEKELAEKQKLESEAATKKAAAEKLK-LEEQKKKDAETASIEKQKEQEKLAQEQ 9947
Query: 412 LRTETVAQQLAQKDLTIEKQXXKKK 486
+ E A++ A+K +E + KK
Sbjct: 9948 SKLEVDAKKSAEKQ-KLESETKSKK 9971
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 29.9 bits (64), Expect = 2.7
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Frame = +1
Query: 241 EAINIIKFLKTSHKQEIAKLKETFAKQAEVIKKLETNRKKELEFLSSELQKYEVNLA--- 411
EA + K + + KQ++ T AE +K LE +KK+ E S E QK + LA
Sbjct: 9909 EADAVKKEKELAEKQKLESEAATKKAAAEKLK-LEEQKKKDAETASIEKQKEQEKLAQEQ 9967
Query: 412 LRTETVAQQLAQKDLTIEKQXXKKK 486
+ E A++ A+K +E + KK
Sbjct: 9968 SKLEVDAKKSAEKQ-KLESETKSKK 9991
Score = 29.5 bits (63), Expect = 3.6
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Frame = +1
Query: 208 KENLLQPTTLQEAINIIKFLKTSHKQEIAKLK-ETFAKQAEVIK-KLETNRKKELEFLSS 381
K L + + +++A + K +E +L+ E K+A+ K KLE +KK E
Sbjct: 13528 KLELEKQSHIKKAAEVDAVKKQKELEEKQRLESEAATKKADAEKLKLEEQKKKAAEIALI 13587
Query: 382 ELQKYEVNLA---LRTETVAQQLAQKDLTIEKQXXKKK 486
E+QK + LA R E A++ A+K +E + K+
Sbjct: 13588 EIQKEQEKLAQEQSRLEDEAKKSAEKQ-KLESETKSKQ 13624
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 29.9 bits (64), Expect = 2.7
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Frame = +1
Query: 241 EAINIIKFLKTSHKQEIAKLKETFAKQAEVIKKLETNRKKELEFLSSELQKYEVNLA--- 411
EA + K + + KQ++ T AE +K LE +KK+ E S E QK + LA
Sbjct: 9909 EADAVKKEKELAEKQKLESEAATKKAAAEKLK-LEEQKKKDAETASIEKQKEQEKLAQEQ 9967
Query: 412 LRTETVAQQLAQKDLTIEKQXXKKK 486
+ E A++ A+K +E + KK
Sbjct: 9968 SKLEVDAKKSAEKQ-KLESETKSKK 9991
Score = 29.5 bits (63), Expect = 3.6
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Frame = +1
Query: 208 KENLLQPTTLQEAINIIKFLKTSHKQEIAKLK-ETFAKQAEVIK-KLETNRKKELEFLSS 381
K L + + +++A + K +E +L+ E K+A+ K KLE +KK E
Sbjct: 13528 KLELEKQSHIKKAAEVDAVKKQKELEEKQRLESEAATKKADAEKLKLEEQKKKAAEIALI 13587
Query: 382 ELQKYEVNLA---LRTETVAQQLAQKDLTIEKQXXKKK 486
E+QK + LA R E A++ A+K +E + K+
Sbjct: 13588 EIQKEQEKLAQEQSRLEDEAKKSAEKQ-KLESETKSKQ 13624
>Z54284-3|CAA91063.1| 666|Caenorhabditis elegans Hypothetical
protein D2085.3 protein.
Length = 666
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = +1
Query: 262 FLKTSHKQEIAKLKETFAKQAEVIKKLETNRKKELEFLSSELQKYEVNLALRTE 423
F+K H Q+ K+KE K + + L+ S++ +++E++L R +
Sbjct: 537 FMKLKHNQDFNKMKELIVKWQPLFLNYYKTSAESLKVKSADQKRFELDLKRRCQ 590
>Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical
protein F54B3.3 protein.
Length = 595
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 301 KETFAKQAEVIKKLETNRKKELEFLSSELQKYEVNLALRTETVAQQLAQKD 453
+E+ KQ E +KK E RK+ +E + KYE+ + ET A+ A +D
Sbjct: 150 EESLRKQEESVKKQEQLRKQTIEHELALKHKYELE-KIDAETRARAKAARD 199
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical protein
T10G3.5b protein.
Length = 1203
Score = 29.1 bits (62), Expect = 4.7
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 10/107 (9%)
Frame = +1
Query: 193 TENSTKENLLQPTTLQEAIN--IIKFLK--TSHKQEIAKLKETFAKQAE---VIKKLETN 351
T+ ++ L+ + E+ N I +F K S K+ I +L+ A++ E V ++
Sbjct: 900 TQRVVEDELVSKISHIESFNSRIEEFEKEMASGKRTIERLEAEKAEETEKLVVFTGTQSQ 959
Query: 352 RKKELEFLSSELQKYEVNLALRTETVAQ---QLAQKDLTIEKQXXKK 483
+++ELE L E+Q+ E +A T + Q A T+ K+ K
Sbjct: 960 KQEELEKLQKEIQEKETTIARMTSSKTQFEAMFADVQQTLSKEINDK 1006
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical protein
T10G3.5a protein.
Length = 1205
Score = 29.1 bits (62), Expect = 4.7
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 10/107 (9%)
Frame = +1
Query: 193 TENSTKENLLQPTTLQEAIN--IIKFLK--TSHKQEIAKLKETFAKQAE---VIKKLETN 351
T+ ++ L+ + E+ N I +F K S K+ I +L+ A++ E V ++
Sbjct: 902 TQRVVEDELVSKISHIESFNSRIEEFEKEMASGKRTIERLEAEKAEETEKLVVFTGTQSQ 961
Query: 352 RKKELEFLSSELQKYEVNLALRTETVAQ---QLAQKDLTIEKQXXKK 483
+++ELE L E+Q+ E +A T + Q A T+ K+ K
Sbjct: 962 KQEELEKLQKEIQEKETTIARMTSSKTQFEAMFADVQQTLSKEINDK 1008
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 29.1 bits (62), Expect = 4.7
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 10/107 (9%)
Frame = +1
Query: 193 TENSTKENLLQPTTLQEAIN--IIKFLK--TSHKQEIAKLKETFAKQAE---VIKKLETN 351
T+ ++ L+ + E+ N I +F K S K+ I +L+ A++ E V ++
Sbjct: 902 TQRVVEDELVSKISHIESFNSRIEEFEKEMASGKRTIERLEAEKAEETEKLVVFTGTQSQ 961
Query: 352 RKKELEFLSSELQKYEVNLALRTETVAQ---QLAQKDLTIEKQXXKK 483
+++ELE L E+Q+ E +A T + Q A T+ K+ K
Sbjct: 962 KQEELEKLQKEIQEKETTIARMTSSKTQFEAMFADVQQTLSKEINDK 1008
>AF000262-5|AAN60522.1| 100|Caenorhabditis elegans Hypothetical
protein C48E7.11 protein.
Length = 100
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Frame = +1
Query: 169 AGNRETNMTENSTKENLLQPTTLQ---EAINIIKFLKTSHKQEIAKLKETFAKQAEVIKK 339
+GNR+ N +E + T + EA+N + K + + A+ + K+ E +++
Sbjct: 2 SGNRKRNTSEPREDDEDDYSTKRKRNNEAVNRTRQKKRQEENDTAEKVDELKKENETLER 61
Query: 340 LETNRKKELEFLSSELQKYEVN 405
+KEL FL Y N
Sbjct: 62 KVEQLQKELSFLKEMFMAYAKN 83
>Z82264-3|CAB05166.1| 277|Caenorhabditis elegans Hypothetical
protein C49C3.7 protein.
Length = 277
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +1
Query: 304 ETFAKQAEVIKKLETNRKKELEFLSSEL-QKYEVNLALRTETVAQQLAQKDLTIEKQXXK 480
ET A + + K+ KKELEFL ++ +++V++ +++E + + L EK+ K
Sbjct: 119 ETTAAENVELLKVTDQLKKELEFLKAQQGNQFKVDMKIKSEMESATQSNLILLREKEMWK 178
Query: 481 KK 486
+
Sbjct: 179 DR 180
>Z22176-5|CAA80134.1| 278|Caenorhabditis elegans Hypothetical
protein ZK1098.6 protein.
Length = 278
Score = 28.3 bits (60), Expect = 8.2
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Frame = +1
Query: 235 LQEAINIIKFLKTS---HKQEIAKLKETFAKQAEVIKKLETNRKKELEFLSSELQKYE-- 399
L++ N IK LK+ K+++ ++ ET + K + RK + SE++K +
Sbjct: 130 LKKRENEIKLLKSEVVDGKKKLNEIVETINHLEDAANKEKIKRKN----VESEMRKADKI 185
Query: 400 VNLALRTETVAQQLAQKDLTIEK 468
+ ALR E A++ +QK+ +EK
Sbjct: 186 IKDALREEMEARKQSQKEYLLEK 208
>AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 1 protein.
Length = 1475
Score = 28.3 bits (60), Expect = 8.2
Identities = 24/91 (26%), Positives = 46/91 (50%)
Frame = +1
Query: 196 ENSTKENLLQPTTLQEAINIIKFLKTSHKQEIAKLKETFAKQAEVIKKLETNRKKELEFL 375
E+ST EN+ + T+Q+ + + L++ +I +LK +Q E+ L ++ E +
Sbjct: 1017 ESSTAENVQKSKTIQDFTDKVSLLES----QICELKSQ-NEQMEIDTNLNMDQLSE---M 1068
Query: 376 SSELQKYEVNLALRTETVAQQLAQKDLTIEK 468
SS+L+ L T T A+ + + +EK
Sbjct: 1069 SSQLESANAELIELTRTSAETIDKLRGEVEK 1099
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,933,173
Number of Sequences: 27780
Number of extensions: 204341
Number of successful extensions: 763
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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