Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_L07
(859 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9GZJ8 Cluster: Mre11; n=1; Bombyx mori|Rep: Mre11 - Bo... 342 8e-93
UniRef50_Q9XYZ4 Cluster: CG16928-PA; n=5; Diptera|Rep: CG16928-P... 209 6e-53
UniRef50_Q54BN2 Cluster: DNA repair exonuclease; n=1; Dictyostel... 198 1e-49
UniRef50_UPI0000DB6F19 Cluster: PREDICTED: similar to meiotic re... 188 2e-46
UniRef50_UPI0000D566D3 Cluster: PREDICTED: similar to CG16928-PA... 186 5e-46
UniRef50_UPI00015B5FB8 Cluster: PREDICTED: similar to meiotic re... 186 8e-46
UniRef50_Q4P5A9 Cluster: Putative uncharacterized protein; n=1; ... 184 3e-45
UniRef50_P49959 Cluster: Double-strand break repair protein MRE1... 183 6e-45
UniRef50_A7SIW1 Cluster: Predicted protein; n=1; Nematostella ve... 179 1e-43
UniRef50_Q9UVN9 Cluster: Double-strand break repair protein MRE1... 178 2e-43
UniRef50_Q9XGM2 Cluster: Double-strand break repair protein MRE1... 177 3e-43
UniRef50_Q09683 Cluster: DNA repair protein rad32; n=1; Schizosa... 174 3e-42
UniRef50_A1CU25 Cluster: Meiotic recombination protein Mre11; n=... 169 1e-40
UniRef50_Q6BL74 Cluster: Debaryomyces hansenii chromosome F of s... 167 3e-40
UniRef50_A5E785 Cluster: Putative uncharacterized protein; n=1; ... 167 4e-40
UniRef50_Q5KHA6 Cluster: Meiotic DNA double-strand break process... 166 5e-40
UniRef50_Q9C291 Cluster: Double-strand break repair protein mus-... 164 3e-39
UniRef50_Q6ZBS2 Cluster: Putative DNA repair and meiosis protein... 156 6e-37
UniRef50_Q586P4 Cluster: Endo/exonuclease Mre11; n=3; Trypanosom... 155 2e-36
UniRef50_A4HFW3 Cluster: Endo/exonuclease Mre11, putative; n=5; ... 153 5e-36
UniRef50_P32829 Cluster: Double-strand break repair protein MRE1... 151 3e-35
UniRef50_A5YZR9 Cluster: MRE11B; n=2; Magnoliophyta|Rep: MRE11B ... 147 3e-34
UniRef50_Q6CEM3 Cluster: Yarrowia lipolytica chromosome B of str... 146 6e-34
UniRef50_Q016A4 Cluster: Mre11 protein; n=3; Ostreococcus|Rep: M... 145 1e-33
UniRef50_A5DLP0 Cluster: Putative uncharacterized protein; n=1; ... 145 1e-33
UniRef50_Q23255 Cluster: Double-strand break repair protein mre-... 141 2e-32
UniRef50_Q22G12 Cluster: Ser/Thr protein phosphatase family prot... 140 5e-32
UniRef50_UPI00015B5FB6 Cluster: PREDICTED: similar to endo/exonu... 139 9e-32
UniRef50_Q8SRV0 Cluster: DOUBLE-STRAND BREAK DNA REPAIR PROTEIN;... 132 8e-30
UniRef50_Q0MR25 Cluster: MRE11-like protein; n=1; Penicillium ma... 122 2e-26
UniRef50_Q86C23 Cluster: Mre11; n=2; Entamoeba histolytica|Rep: ... 115 2e-24
UniRef50_A0DUM4 Cluster: Chromosome undetermined scaffold_64, wh... 113 7e-24
UniRef50_A7AP02 Cluster: DNA repair protein (Mre11) family prote... 107 5e-22
UniRef50_UPI000049A054 Cluster: DNA repair protein rad32; n=1; E... 99 1e-19
UniRef50_A2ECB0 Cluster: Ser/Thr protein phosphatase, putative; ... 99 2e-19
UniRef50_Q4U965 Cluster: Double-strand break repair protein, put... 95 2e-18
UniRef50_Q7RBG7 Cluster: Rad32-related; n=6; Plasmodium (Vinckei... 83 7e-15
UniRef50_A5K9T7 Cluster: DNA repair exonuclease, putative; n=1; ... 79 1e-13
UniRef50_Q8I263 Cluster: DNA repair exonuclease, putative; n=1; ... 77 6e-13
UniRef50_A3FQD2 Cluster: DNA repair and meiosis protein Mre11; n... 76 1e-12
UniRef50_Q8U1N9 Cluster: DNA double-strand break repair protein ... 50 8e-07
UniRef50_Q8PUY5 Cluster: DNA double-strand break repair protein ... 54 6e-06
UniRef50_Q46FJ9 Cluster: DNA repair protein; n=1; Methanosarcina... 53 8e-06
UniRef50_Q2S4Q6 Cluster: Nuclease SbcCD, D subunit subfamily, pu... 35 5e-05
UniRef50_A4ENU6 Cluster: Putative ATP-dependent dsDNA exonucleas... 50 1e-04
UniRef50_A5YS39 Cluster: DNA double-strand break repair protein ... 49 1e-04
UniRef50_O29231 Cluster: DNA double-strand break repair protein ... 49 1e-04
UniRef50_Q9UZC9 Cluster: DNA double-strand break repair protein ... 45 2e-04
UniRef50_A2BM15 Cluster: Predicted DNA repair exonuclease; n=1; ... 47 5e-04
UniRef50_A3HX94 Cluster: DNA repair exonuclease; n=1; Algoriphag... 47 7e-04
UniRef50_Q2JK75 Cluster: Ser/Thr protein phosphatase family prot... 46 0.001
UniRef50_Q3ISN6 Cluster: Conserved DNA repair operon protein; n=... 46 0.001
UniRef50_Q12VW7 Cluster: Metallophosphoesterase; n=1; Methanococ... 46 0.001
UniRef50_Q8DMQ1 Cluster: Tll0060 protein; n=1; Synechococcus elo... 44 0.005
UniRef50_Q8TXI3 Cluster: DNA double-strand break repair protein ... 44 0.005
UniRef50_Q2NFC6 Cluster: DNA double-strand break repair protein ... 44 0.007
UniRef50_P62131 Cluster: DNA double-strand break repair protein ... 36 0.013
UniRef50_A7BEB8 Cluster: Putative uncharacterized protein; n=1; ... 42 0.020
UniRef50_Q03B99 Cluster: DNA repair exonuclease; n=4; Lactobacil... 42 0.026
UniRef50_O26641 Cluster: DNA double-strand break repair protein ... 42 0.026
UniRef50_O67727 Cluster: ATP-dependent dsDNA exonuclease; n=1; A... 41 0.035
UniRef50_Q0HTQ0 Cluster: Nuclease SbcCD, D subunit precursor; n=... 41 0.035
UniRef50_Q9YFY8 Cluster: DNA double-strand break repair protein ... 41 0.035
UniRef50_Q5LYZ3 Cluster: ATP-dependent dsDNA exonuclease; n=6; S... 41 0.046
UniRef50_A6UUX3 Cluster: Metallophosphoesterase; n=1; Methanococ... 40 0.061
UniRef50_Q9HRW4 Cluster: DNA double-strand break repair protein ... 40 0.061
UniRef50_Q3A5P7 Cluster: DNA repair exonuclease; n=1; Pelobacter... 40 0.080
UniRef50_Q7QVF9 Cluster: GLP_90_7352_9805; n=3; Giardia intestin... 40 0.080
UniRef50_A0RW71 Cluster: DNA repair exonuclease; n=1; Cenarchaeu... 40 0.080
UniRef50_UPI00015BCD31 Cluster: UPI00015BCD31 related cluster; n... 40 0.11
UniRef50_Q88WS0 Cluster: Exonuclease SbcD; n=2; Lactobacillales|... 40 0.11
UniRef50_A7DNM9 Cluster: Metallophosphoesterase; n=1; Candidatus... 40 0.11
UniRef50_A5UJE8 Cluster: DNA repair exonuclease (SbcD/Mre11-fami... 40 0.11
UniRef50_A7HL21 Cluster: Metallophosphoesterase; n=1; Fervidobac... 39 0.14
UniRef50_A3H5S8 Cluster: Metallophosphoesterase; n=1; Caldivirga... 39 0.14
UniRef50_Q9AN75 Cluster: ID473; n=1; Bradyrhizobium japonicum|Re... 39 0.19
UniRef50_Q2AE44 Cluster: Metallophosphoesterase; n=1; Halothermo... 39 0.19
UniRef50_A6TVN1 Cluster: Nuclease SbcCD, D subunit; n=3; Clostri... 39 0.19
UniRef50_UPI00015BAD8F Cluster: metallophosphoesterase; n=1; Ign... 38 0.25
UniRef50_Q5XUC9 Cluster: Zona pellucida C related protein; n=4; ... 38 0.25
UniRef50_Q2AI56 Cluster: Exonuclease SbcD; n=1; Halothermothrix ... 38 0.25
UniRef50_Q67MD2 Cluster: DNA repair exonuclease; n=1; Symbiobact... 38 0.32
UniRef50_A4YET4 Cluster: Metallophosphoesterase; n=1; Metallosph... 38 0.32
UniRef50_Q3ICS5 Cluster: Exonuclease sbcCD subunit D; n=2; Alter... 38 0.43
UniRef50_Q6I2G3 Cluster: DNA repair exonuclease family protein; ... 38 0.43
UniRef50_A7HCA1 Cluster: Nuclease SbcCD, D subunit; n=1; Anaerom... 38 0.43
UniRef50_A6Q875 Cluster: DNA double-strand break repair protein;... 38 0.43
UniRef50_A6P235 Cluster: Putative uncharacterized protein; n=1; ... 38 0.43
UniRef50_Q8TNC7 Cluster: Phosphoesterase; n=2; Methanosarcina|Re... 38 0.43
UniRef50_Q2B178 Cluster: DNA repair exonuclease family protein; ... 32 0.55
UniRef50_Q8Y6N8 Cluster: Lmo1646 protein; n=12; Listeria|Rep: Lm... 37 0.57
UniRef50_Q1FMZ5 Cluster: Nuclease SbcCD, D subunit; n=1; Clostri... 37 0.57
UniRef50_A0LM47 Cluster: Nuclease SbcCD, D subunit; n=1; Syntrop... 37 0.57
UniRef50_Q6L2H7 Cluster: DNA repair protein; n=2; Thermoplasmata... 37 0.57
UniRef50_P62132 Cluster: DNA double-strand break repair protein ... 37 0.57
UniRef50_A1S175 Cluster: Metallophosphoesterase precursor; n=1; ... 29 0.91
UniRef50_Q830T2 Cluster: Exonuclease SbcD; n=3; Lactobacillales|... 36 0.99
UniRef50_Q74D96 Cluster: Nuclease SbcCD, D subunit, putative; n=... 36 0.99
UniRef50_Q2RL80 Cluster: Metallophosphoesterase; n=1; Moorella t... 36 0.99
UniRef50_Q3ADJ2 Cluster: Ser/Thr protein phosphatase family prot... 36 1.3
UniRef50_A5ZTK8 Cluster: Putative uncharacterized protein; n=1; ... 36 1.3
UniRef50_A0P1W8 Cluster: Putative DNA repair exonuclease; n=1; S... 36 1.3
UniRef50_Q9X1X0 Cluster: Exonuclease, putative; n=3; Thermotoga|... 36 1.7
UniRef50_Q897Z1 Cluster: Exonuclease sbcD; n=2; Clostridium|Rep:... 36 1.7
UniRef50_Q3W6X0 Cluster: Exonuclease SbcD; n=3; Actinomycetales|... 36 1.7
UniRef50_Q04FF3 Cluster: DNA repair exonuclease; n=2; Oenococcus... 36 1.7
UniRef50_Q5SIS5 Cluster: Exonuclease SbcD; n=2; Thermus thermoph... 35 2.3
UniRef50_A5EW10 Cluster: Exonuclease SbcD; n=1; Dichelobacter no... 35 2.3
UniRef50_A1R7R7 Cluster: Putative nuclease SbcCD, D subunit; n=1... 35 2.3
UniRef50_A1S0I8 Cluster: Metallophosphoesterase; n=1; Thermofilu... 35 2.3
UniRef50_A4J7M8 Cluster: Metallophosphoesterase; n=1; Desulfotom... 32 2.7
UniRef50_UPI00015C5C4B Cluster: hypothetical protein CKO_02773; ... 35 3.0
UniRef50_Q9RT45 Cluster: Exonuclease SbcD, putative; n=2; Deinoc... 35 3.0
UniRef50_Q8EP66 Cluster: Exonuclease; n=13; Bacillaceae|Rep: Exo... 35 3.0
UniRef50_Q7UKG1 Cluster: Probable phosphoesterase yhaO-putative ... 35 3.0
UniRef50_Q5P494 Cluster: Exonuclease SbcD; n=1; Azoarcus sp. EbN... 35 3.0
UniRef50_Q38Y02 Cluster: Putative metallo-phosphoesterase; n=1; ... 35 3.0
UniRef50_A5WEF9 Cluster: Nuclease SbcCD, D subunit; n=3; Psychro... 35 3.0
UniRef50_Q4XVJ3 Cluster: Putative uncharacterized protein; n=3; ... 35 3.0
UniRef50_Q65LT8 Cluster: YhaO; n=4; Bacillus|Rep: YhaO - Bacillu... 34 4.0
UniRef50_Q2IN32 Cluster: Nuclease SbcCD, D subunit; n=2; Myxococ... 34 4.0
UniRef50_Q1NCL0 Cluster: Nuclease SbcCD, D subunit; n=1; Sphingo... 34 4.0
UniRef50_A3WLK0 Cluster: Exonuclease SbcD, putative; n=1; Idioma... 34 4.0
UniRef50_Q54NN5 Cluster: Putative uncharacterized protein; n=2; ... 34 4.0
UniRef50_Q22P75 Cluster: Putative uncharacterized protein; n=1; ... 34 4.0
UniRef50_A2F419 Cluster: Putative uncharacterized protein; n=1; ... 34 4.0
UniRef50_A6CK39 Cluster: Exonuclease; n=3; Bacillaceae|Rep: Exon... 29 4.6
UniRef50_Q03QD8 Cluster: DNA repair exonuclease; n=1; Lactobacil... 34 5.3
UniRef50_A6WB40 Cluster: Metallophosphoesterase; n=1; Kineococcu... 34 5.3
UniRef50_A5IU09 Cluster: Metallophosphoesterase; n=16; Staphyloc... 34 5.3
UniRef50_A1SK69 Cluster: Nuclease SbcCD, D subunit; n=2; Actinom... 34 5.3
UniRef50_A1K1W1 Cluster: Exonuclease SbcD, putative; n=4; Betapr... 34 5.3
UniRef50_Q552H6 Cluster: Putative uncharacterized protein; n=2; ... 34 5.3
UniRef50_Q3IPC0 Cluster: Putative uncharacterized protein; n=1; ... 34 5.3
UniRef50_Q74CF0 Cluster: Nuclease SbcCD, D subunit, putative; n=... 33 7.0
UniRef50_Q1VZW8 Cluster: Exonuclease SbcD; n=1; Psychroflexus to... 33 7.0
UniRef50_A7DFW6 Cluster: Nuclease SbcCD, D subunit; n=3; Alphapr... 33 7.0
UniRef50_A3YYZ0 Cluster: Putative exonuclease; n=1; Synechococcu... 33 7.0
UniRef50_A3I3N6 Cluster: Putative uncharacterized protein; n=1; ... 33 7.0
UniRef50_Q23MC1 Cluster: Putative uncharacterized protein; n=1; ... 33 7.0
UniRef50_A0BB93 Cluster: Chromosome undetermined scaffold_1, who... 33 7.0
UniRef50_Q2K465 Cluster: Putative sensory box/GGDEF family prote... 33 9.2
UniRef50_A5VL00 Cluster: Metallophosphoesterase; n=2; Lactobacil... 33 9.2
UniRef50_A5KQM8 Cluster: Putative uncharacterized protein; n=1; ... 33 9.2
>UniRef50_Q9GZJ8 Cluster: Mre11; n=1; Bombyx mori|Rep: Mre11 -
Bombyx mori (Silk moth)
Length = 610
Score = 342 bits (840), Expect = 8e-93
Identities = 161/163 (98%), Positives = 161/163 (98%)
Frame = +3
Query: 168 MIENDISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLG 347
MIENDISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLG
Sbjct: 1 MIENDISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLG 60
Query: 348 GDLFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPI 527
GDLFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPI
Sbjct: 61 GDLFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPI 120
Query: 528 LSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYXPVRIS 656
LSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDY VRIS
Sbjct: 121 LSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRIS 163
>UniRef50_Q9XYZ4 Cluster: CG16928-PA; n=5; Diptera|Rep: CG16928-PA -
Drosophila melanogaster (Fruit fly)
Length = 620
Score = 209 bits (511), Expect = 6e-53
Identities = 98/156 (62%), Positives = 122/156 (78%), Gaps = 4/156 (2%)
Frame = +3
Query: 201 DDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV 380
D+ +RIL+A+D HLG+ E D VRGEDSF AFEE+L LAV DVD+ILLGGDLF A PS
Sbjct: 12 DNVIRILVATDNHLGYGEKDAVRGEDSFTAFEEILELAVSEDVDMILLGGDLFHDAVPSQ 71
Query: 381 NCMFKCTEIIRKYCLGDKPVSIELLSDQIKNF----SRTVNYEDPNLNISYPILSIHGNH 548
N + KC E++R+Y GD+PVS+E+LSDQ + F +++VNYEDPNLNI+ P+ SIHGNH
Sbjct: 72 NALHKCIELLRRYTFGDRPVSLEILSDQGQCFHNAVNQSVNYEDPNLNIAIPVFSIHGNH 131
Query: 549 DDPVGQGSVSSLDILSITGLVNYFGKWTDYXPVRIS 656
DDP G G +SSLD+LS +GLVNYFG+WTD V IS
Sbjct: 132 DDPSGFGRLSSLDLLSTSGLVNYFGRWTDLTQVEIS 167
>UniRef50_Q54BN2 Cluster: DNA repair exonuclease; n=1; Dictyostelium
discoideum AX4|Rep: DNA repair exonuclease -
Dictyostelium discoideum AX4
Length = 689
Score = 198 bits (483), Expect = 1e-49
Identities = 88/151 (58%), Positives = 114/151 (75%), Gaps = 3/151 (1%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 389
+RIL+A+D HLG++E DP+RG+DSF +FEE+L A VD++LLGGDLF KPS +C+
Sbjct: 43 MRILVATDNHLGYLERDPIRGDDSFNSFEEILKYAHTLKVDMVLLGGDLFHDNKPSRSCL 102
Query: 390 FKCTEIIRKYCLGDKPVSIELLSDQIKNFS---RTVNYEDPNLNISYPILSIHGNHDDPV 560
++ E+ RKYCLGD PV I+ LSDQ NFS TVNYEDPN NIS PI SIHGNHDDP
Sbjct: 103 YRTMELFRKYCLGDSPVRIQFLSDQSVNFSNQFHTVNYEDPNFNISLPIFSIHGNHDDPT 162
Query: 561 GQGSVSSLDILSITGLVNYFGKWTDYXPVRI 653
G+G +++LD+LS++ LVNYFGK D + +
Sbjct: 163 GEGGLAALDLLSVSNLVNYFGKTEDIDDITV 193
>UniRef50_UPI0000DB6F19 Cluster: PREDICTED: similar to meiotic
recombination 11 CG16928-PA; n=1; Apis mellifera|Rep:
PREDICTED: similar to meiotic recombination 11
CG16928-PA - Apis mellifera
Length = 501
Score = 188 bits (458), Expect = 2e-46
Identities = 92/171 (53%), Positives = 116/171 (67%), Gaps = 6/171 (3%)
Frame = +3
Query: 159 SKIMIENDISAWSPDDTLRILIASDIHLGFMENDP--VRGEDSFIAFEEVLSLAVQCDVD 332
S I N +PDD+++ILIA+DIHLGF N + EDSFI FEE+L + +VD
Sbjct: 2 SSTPINNKNEKRNPDDSIKILIATDIHLGFEYNKKRGQQSEDSFITFEEILQYGKEYEVD 61
Query: 333 LILLGGDLFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFS----RTVNYED 500
ILLGGDLF KPS + +C E++RKYCLG K + I+ LSD F +TVNYED
Sbjct: 62 FILLGGDLFHDTKPSQTAILRCMELLRKYCLGTKEIKIQFLSDPEVIFRHCAYKTVNYED 121
Query: 501 PNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYXPVRI 653
PNLNIS PI SIHGNHDDP G++ S+D+LS++GL+NYFGKWTD + I
Sbjct: 122 PNLNISMPIFSIHGNHDDP-SFGAIGSMDLLSVSGLINYFGKWTDLTKINI 171
>UniRef50_UPI0000D566D3 Cluster: PREDICTED: similar to CG16928-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG16928-PA - Tribolium castaneum
Length = 555
Score = 186 bits (454), Expect = 5e-46
Identities = 86/156 (55%), Positives = 113/156 (72%), Gaps = 2/156 (1%)
Frame = +3
Query: 195 SPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 374
S +T RIL+A+D+HLG+ N+ +R D+F FEE+L +A + VD ILLGGDLF +A+P
Sbjct: 4 SEANTFRILLATDLHLGYGLNNSIRENDTFRTFEEILQIANKEKVDFILLGGDLFHEARP 63
Query: 375 SVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNF--SRTVNYEDPNLNISYPILSIHGNH 548
+ +C+ K E+IRKYC GDKPV IE SD +F + +VNYEDPN+N+S PI SIHGNH
Sbjct: 64 TPHCIKKTIELIRKYCFGDKPVEIEFFSDPSLHFPGNASVNYEDPNINVSIPIFSIHGNH 123
Query: 549 DDPVGQGSVSSLDILSITGLVNYFGKWTDYXPVRIS 656
DDP G+ VS+LD+ S GLVNYFG+W D V I+
Sbjct: 124 DDPTGKNHVSALDLFSSMGLVNYFGRWDDVTKVEIN 159
>UniRef50_UPI00015B5FB8 Cluster: PREDICTED: similar to meiotic
recombination repair protein 11 (mre11); n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to meiotic
recombination repair protein 11 (mre11) - Nasonia
vitripennis
Length = 664
Score = 186 bits (452), Expect = 8e-46
Identities = 85/156 (54%), Positives = 112/156 (71%), Gaps = 4/156 (2%)
Frame = +3
Query: 201 DDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV 380
++ +++LIA+DIHLG+ E R +DSF FEE+L A +VD++LLGGDLF +AKP
Sbjct: 34 ENIMKVLIATDIHLGY-EQTTKREDDSFRTFEEILQYARDHEVDMVLLGGDLFHEAKPPH 92
Query: 381 NCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFS----RTVNYEDPNLNISYPILSIHGNH 548
N + KC E++R YCL DKPV I+ L+D FS + VN+EDPNLN+ P+ SIHGNH
Sbjct: 93 NVVMKCLELLRTYCLNDKPVKIQFLTDPEAVFSHCAQKVVNFEDPNLNVGIPVFSIHGNH 152
Query: 549 DDPVGQGSVSSLDILSITGLVNYFGKWTDYXPVRIS 656
DDP G G+V S+D+LS TGL+NYFGKWTD V I+
Sbjct: 153 DDPTGYGAVGSMDVLSATGLINYFGKWTDVTQVSIA 188
>UniRef50_Q4P5A9 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 883
Score = 184 bits (447), Expect = 3e-45
Identities = 88/156 (56%), Positives = 118/156 (75%), Gaps = 9/156 (5%)
Frame = +3
Query: 186 SAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQ 365
+A S DD ++I++A+D H+G+ME DPVRG+DS FEE+L LAVQ DVDLILLGGDLF +
Sbjct: 103 AAQSEDDHIKIMLATDNHIGYMERDPVRGQDSIRTFEEILQLAVQHDVDLILLGGDLFHE 162
Query: 366 AKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQI------KNFSRTVNYEDPNLNISYPI 527
KPS + + + ++R+Y LGDKP+S+ELLSD K F +NYEDPNLN++ P+
Sbjct: 163 NKPSRDTLHQTMALLRQYTLGDKPISVELLSDPNDGALPGKRFP-AINYEDPNLNVAIPV 221
Query: 528 LSIHGNHDDPVG---QGSVSSLDILSITGLVNYFGK 626
SIHGNHDDP G G++S+LD+LS++GL+NYFGK
Sbjct: 222 FSIHGNHDDPQGVGETGALSALDLLSVSGLINYFGK 257
>UniRef50_P49959 Cluster: Double-strand break repair protein MRE11A;
n=42; Deuterostomia|Rep: Double-strand break repair
protein MRE11A - Homo sapiens (Human)
Length = 708
Score = 183 bits (445), Expect = 6e-45
Identities = 85/160 (53%), Positives = 112/160 (70%), Gaps = 4/160 (2%)
Frame = +3
Query: 189 AWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQA 368
A ++T +IL+A+DIHLGFME D VRG D+F+ +E+L LA + +VD ILLGGDLF +
Sbjct: 6 ALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHEN 65
Query: 369 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSI 536
KPS + C E++RKYC+GD+PV E+LSDQ NF + VNY+D NLNIS P+ SI
Sbjct: 66 KPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSI 125
Query: 537 HGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYXPVRIS 656
HGNHDDP G ++ +LDILS G VN+FG+ + IS
Sbjct: 126 HGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDIS 165
>UniRef50_A7SIW1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 720
Score = 179 bits (435), Expect = 1e-43
Identities = 81/155 (52%), Positives = 109/155 (70%), Gaps = 4/155 (2%)
Frame = +3
Query: 204 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 383
+TL ILIA+D+HLG+ E D VRG DSF+ FEE L +A + +VD ILLGGDL+ + KPS
Sbjct: 49 NTLSILIATDVHLGYAEKDQVRGNDSFVTFEETLQIAKKRNVDFILLGGDLYHENKPSRR 108
Query: 384 CMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSIHGNHD 551
+ + RK+C+GD+ +E LSDQ NF+ VNYEDPNLN+S P+ SIHGNHD
Sbjct: 109 TLHASMALFRKFCMGDRVCEVEFLSDQSINFANNRFPWVNYEDPNLNVSIPVFSIHGNHD 168
Query: 552 DPVGQGSVSSLDILSITGLVNYFGKWTDYXPVRIS 656
DP G+G++ +LD+LS+ GLVNYFG+ + +S
Sbjct: 169 DPAGEGNLCALDLLSVCGLVNYFGRPASVDDITVS 203
>UniRef50_Q9UVN9 Cluster: Double-strand break repair protein MRE11;
n=2; Fungi/Metazoa group|Rep: Double-strand break repair
protein MRE11 - Coprinus cinereus (Inky cap fungus)
(Hormographiella aspergillata)
Length = 731
Score = 178 bits (433), Expect = 2e-43
Identities = 81/158 (51%), Positives = 116/158 (73%), Gaps = 8/158 (5%)
Frame = +3
Query: 180 DISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLF 359
+I P+DT++IL+A+D H+G++E DP+RG+DS F E+L LAV+ +VD ILL GDLF
Sbjct: 13 NIETADPEDTIKILLATDNHIGYLERDPIRGQDSINTFREILQLAVKNEVDFILLAGDLF 72
Query: 360 DQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSD----QIKNFS-RTVNYEDPNLNISYP 524
+ KPS +C+++ ++R+Y LGDKP+ +ELLSD + FS +NYEDPN NIS P
Sbjct: 73 HENKPSRDCLYQTLALLREYTLGDKPIQVELLSDPDEGKAAGFSFPAINYEDPNFNISIP 132
Query: 525 ILSIHGNHDDPVG---QGSVSSLDILSITGLVNYFGKW 629
+ SIHGNHDDP G G++ +LD+LS++GL+NY GK+
Sbjct: 133 VFSIHGNHDDPQGPGVNGALCALDVLSVSGLLNYMGKF 170
>UniRef50_Q9XGM2 Cluster: Double-strand break repair protein MRE11;
n=14; Magnoliophyta|Rep: Double-strand break repair
protein MRE11 - Arabidopsis thaliana (Mouse-ear cress)
Length = 720
Score = 177 bits (431), Expect = 3e-43
Identities = 80/144 (55%), Positives = 104/144 (72%), Gaps = 3/144 (2%)
Frame = +3
Query: 204 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 383
DTLR+L+A+D HLG+ME D +R DSF AFEE+ S+A + VD +LLGGDLF + KPS
Sbjct: 8 DTLRVLVATDCHLGYMEKDEIRRHDSFKAFEEICSIAEEKQVDFLLLGGDLFHENKPSRT 67
Query: 384 CMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT---VNYEDPNLNISYPILSIHGNHDD 554
+ K EI+R++CL DKPV +++SDQ NF VNYEDP+ N+ P+ SIHGNHDD
Sbjct: 68 TLVKAIEILRRHCLNDKPVQFQVVSDQTVNFQNAFGQVNYEDPHFNVGLPVFSIHGNHDD 127
Query: 555 PVGQGSVSSLDILSITGLVNYFGK 626
P G ++S++DILS LVNYFGK
Sbjct: 128 PAGVDNLSAIDILSACNLVNYFGK 151
>UniRef50_Q09683 Cluster: DNA repair protein rad32; n=1;
Schizosaccharomyces pombe|Rep: DNA repair protein rad32
- Schizosaccharomyces pombe (Fission yeast)
Length = 649
Score = 174 bits (423), Expect = 3e-42
Identities = 79/146 (54%), Positives = 105/146 (71%), Gaps = 4/146 (2%)
Frame = +3
Query: 201 DDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV 380
++T+RILI+SD H+G+ E DPVRG DSF++F E+L +A + DVD+ILLGGD+F KPS
Sbjct: 15 ENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSR 74
Query: 381 NCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSIHGNH 548
+++ +R CLGDKP +ELLSD T +NY DPN+N++ P+ SIHGNH
Sbjct: 75 KALYQALRSLRLNCLGDKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNH 134
Query: 549 DDPVGQGSVSSLDILSITGLVNYFGK 626
DDP G G S+LDIL +TGLVNYFG+
Sbjct: 135 DDPSGDGRYSALDILQVTGLVNYFGR 160
>UniRef50_A1CU25 Cluster: Meiotic recombination protein Mre11; n=14;
Pezizomycotina|Rep: Meiotic recombination protein Mre11
- Aspergillus clavatus
Length = 816
Score = 169 bits (410), Expect = 1e-40
Identities = 75/153 (49%), Positives = 111/153 (72%), Gaps = 3/153 (1%)
Frame = +3
Query: 204 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 383
+T+RIL+A+D H+G+ E DP+RG+DS+ +F EV+ LA + DVD++LL GDLF + KPS
Sbjct: 25 ETIRILVATDNHVGYNERDPIRGDDSWKSFHEVMCLARERDVDMVLLAGDLFHENKPSRK 84
Query: 384 CMFKCTEIIRKYCLGDKPVSIELLSDQIKNFS---RTVNYEDPNLNISYPILSIHGNHDD 554
M++ IR CLGDKP +E+LSD +NF VNYED ++N++ PI SIHGNHDD
Sbjct: 85 SMYQVMRSIRMNCLGDKPCELEMLSDASENFQGAFNHVNYEDLDINVAIPIFSIHGNHDD 144
Query: 555 PVGQGSVSSLDILSITGLVNYFGKWTDYXPVRI 653
P G+G +++LD+L ++GL+NY+G+ + + I
Sbjct: 145 PSGEGHLAALDLLQVSGLLNYYGRTPESDNIHI 177
>UniRef50_Q6BL74 Cluster: Debaryomyces hansenii chromosome F of
strain CBS767 of Debaryomyces hansenii; n=3;
Saccharomycetales|Rep: Debaryomyces hansenii chromosome
F of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 688
Score = 167 bits (406), Expect = 3e-40
Identities = 78/147 (53%), Positives = 104/147 (70%), Gaps = 3/147 (2%)
Frame = +3
Query: 195 SPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 374
S DT+RILI +D H+G+ ENDP+RG+DS+ FEE+ S+A + DVD+IL GGDLF KP
Sbjct: 9 SGPDTIRILITTDNHVGYNENDPIRGDDSWKTFEEITSIAKEKDVDMILQGGDLFHINKP 68
Query: 375 SVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSR---TVNYEDPNLNISYPILSIHGN 545
S M+K + +R CLGD+P +ELL D + TVNYEDPN+NIS P+ +I GN
Sbjct: 69 SKKSMYKVIKSLRTNCLGDRPCELELLGDPSMALGKDVDTVNYEDPNINISVPVFAISGN 128
Query: 546 HDDPVGQGSVSSLDILSITGLVNYFGK 626
HDD G+G + LD+LS +GL+N+FGK
Sbjct: 129 HDDATGEGFLLPLDLLSASGLINHFGK 155
>UniRef50_A5E785 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 669
Score = 167 bits (405), Expect = 4e-40
Identities = 74/147 (50%), Positives = 107/147 (72%), Gaps = 3/147 (2%)
Frame = +3
Query: 204 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 383
DTL+IL+ +D H+G++ENDP+RG+DS+ F+E+ LA DVD+I+ GGDLF KP+
Sbjct: 12 DTLKILLTTDNHVGYLENDPIRGDDSWKTFDEITRLARDHDVDMIIQGGDLFHINKPTKK 71
Query: 384 CMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSR---TVNYEDPNLNISYPILSIHGNHDD 554
M+ + +R C+GD+P +ELLS+ + S VNYEDPNLNIS P+ +I+GNHDD
Sbjct: 72 SMYHVMKSLRANCMGDRPCELELLSEPGETMSNGFDEVNYEDPNLNISVPVFAINGNHDD 131
Query: 555 PVGQGSVSSLDILSITGLVNYFGKWTD 635
G+G +S+LD+L+++GL+NYFGK D
Sbjct: 132 ATGEGMLSALDVLAVSGLINYFGKTRD 158
>UniRef50_Q5KHA6 Cluster: Meiotic DNA double-strand break
processing-related protein, putative; n=3; Fungi/Metazoa
group|Rep: Meiotic DNA double-strand break
processing-related protein, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 721
Score = 166 bits (404), Expect = 5e-40
Identities = 83/161 (51%), Positives = 111/161 (68%), Gaps = 10/161 (6%)
Frame = +3
Query: 174 ENDISAWSPD--DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLG 347
E +S PD + RILIA+D H+G+ E DPVRG+DS F E+L LA DVD ILL
Sbjct: 19 EPPLSIVEPDLENCFRILIATDNHIGYAEKDPVRGQDSINTFREILELARDHDVDFILLA 78
Query: 348 GDLFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQI----KNFS-RTVNYEDPNLN 512
GDLF + +PS CM + ++R++ LGDKP+ ELLSD + FS VNYEDPN+N
Sbjct: 79 GDLFHENRPSRTCMHQTIALLREFTLGDKPIEFELLSDPMDGSTPGFSFPAVNYEDPNIN 138
Query: 513 ISYPILSIHGNHDDPVG---QGSVSSLDILSITGLVNYFGK 626
I+ P+ SIHGNHDDP G +G++ +LD+LS++G++NYFGK
Sbjct: 139 IAIPVFSIHGNHDDPQGTGPEGALCALDVLSVSGVLNYFGK 179
>UniRef50_Q9C291 Cluster: Double-strand break repair protein mus-23;
n=5; Pezizomycotina|Rep: Double-strand break repair
protein mus-23 - Neurospora crassa
Length = 760
Score = 164 bits (398), Expect = 3e-39
Identities = 73/144 (50%), Positives = 102/144 (70%), Gaps = 3/144 (2%)
Frame = +3
Query: 204 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 383
DT+RIL+++D H+G+ E PVR +DS+ F+E++ +A + DVD++LLGGDLF + KPS
Sbjct: 28 DTIRILVSTDNHVGYAERHPVRKDDSWRTFDEIMQIAKKQDVDMVLLGGDLFHENKPSRK 87
Query: 384 CMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT---VNYEDPNLNISYPILSIHGNHDD 554
M++ +RK+CLG KP +E LSD + F VNYEDP++N++ P+ SIHGNHDD
Sbjct: 88 SMYQVMRSLRKHCLGMKPCELEFLSDAAEVFEGAFPFVNYEDPDINVAIPVFSIHGNHDD 147
Query: 555 PVGQGSVSSLDILSITGLVNYFGK 626
P G G SLD+L GLVNYFG+
Sbjct: 148 PSGDGHYCSLDLLQAAGLVNYFGR 171
>UniRef50_Q6ZBS2 Cluster: Putative DNA repair and meiosis protein
Mre11; n=2; Oryza sativa|Rep: Putative DNA repair and
meiosis protein Mre11 - Oryza sativa subsp. japonica
(Rice)
Length = 615
Score = 156 bits (379), Expect = 6e-37
Identities = 75/152 (49%), Positives = 101/152 (66%), Gaps = 5/152 (3%)
Frame = +3
Query: 186 SAWSPDDT--LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLF 359
++W ++ LRIL+A+D HLG++E D +R DSF FEE+ SLAV VD ILLGG+LF
Sbjct: 6 ASWDEEENSMLRILVATDCHLGYLEKDEIRRFDSFDTFEEICSLAVINKVDFILLGGNLF 65
Query: 360 DQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQ---IKNFSRTVNYEDPNLNISYPIL 530
+ KPS++ + K EIIR YCL D V +++SDQ ++N VN+EDPN NI P+
Sbjct: 66 HENKPSISTLVKSMEIIRSYCLNDHQVQFQVVSDQAACLQNRFGRVNFEDPNFNIGLPVF 125
Query: 531 SIHGNHDDPVGQGSVSSLDILSITGLVNYFGK 626
++HG HD P G +S+ DILS VNYFGK
Sbjct: 126 TVHGTHDGPAGVDGLSATDILSACNFVNYFGK 157
>UniRef50_Q586P4 Cluster: Endo/exonuclease Mre11; n=3; Trypanosoma
brucei|Rep: Endo/exonuclease Mre11 - Trypanosoma brucei
Length = 763
Score = 155 bits (375), Expect = 2e-36
Identities = 75/144 (52%), Positives = 96/144 (66%), Gaps = 5/144 (3%)
Frame = +3
Query: 207 TLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLA-VQCDVDLILLGGDLFDQAKPSVN 383
T + L+ SD HLG+ E D RG+DSF FEE L A ++ +VD ILL GD F KPS+
Sbjct: 37 TFKFLVTSDNHLGYQERDSRRGDDSFTTFEECLRAARLEHEVDAILLAGDFFHDNKPSLG 96
Query: 384 CMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSR----TVNYEDPNLNISYPILSIHGNHD 551
C+ + + ++R Y LGDKP+S LLSD +NF N++DPN+N++ PI IHGNHD
Sbjct: 97 CLARTSSLLRSYVLGDKPISFTLLSDPKRNFPTHPVPLANFQDPNINVALPIFMIHGNHD 156
Query: 552 DPVGQGSVSSLDILSITGLVNYFG 623
DPV G SS+DILS GLVNYFG
Sbjct: 157 DPV--GGTSSIDILSTAGLVNYFG 178
>UniRef50_A4HFW3 Cluster: Endo/exonuclease Mre11, putative; n=5;
Trypanosomatidae|Rep: Endo/exonuclease Mre11, putative -
Leishmania braziliensis
Length = 863
Score = 153 bits (371), Expect = 5e-36
Identities = 74/147 (50%), Positives = 96/147 (65%), Gaps = 5/147 (3%)
Frame = +3
Query: 207 TLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLA-VQCDVDLILLGGDLFDQAKPSVN 383
T + L+ +D HLGF E DP RG+DSF FEEVL A + DVD +LLGGDLF + KPS+
Sbjct: 5 TFKFLLTTDNHLGFAERDPRRGDDSFTTFEEVLRAARTEHDVDAMLLGGDLFHENKPSLG 64
Query: 384 CMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSR----TVNYEDPNLNISYPILSIHGNHD 551
C+ + + RKY G+K V LLSD NF N++DPN+N++ P+ +IHGNHD
Sbjct: 65 CLVRACSLFRKYVFGNKTVPFSLLSDAATNFPTHALPMANFQDPNINVALPVFAIHGNHD 124
Query: 552 DPVGQGSVSSLDILSITGLVNYFGKWT 632
DPV G SSLD+L+ G +NYFG T
Sbjct: 125 DPV--GGTSSLDLLATNGYLNYFGHVT 149
>UniRef50_P32829 Cluster: Double-strand break repair protein MRE11;
n=9; Saccharomycetales|Rep: Double-strand break repair
protein MRE11 - Saccharomyces cerevisiae (Baker's yeast)
Length = 692
Score = 151 bits (365), Expect = 3e-35
Identities = 72/157 (45%), Positives = 103/157 (65%), Gaps = 5/157 (3%)
Frame = +3
Query: 198 PD-DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 374
PD DT+RILI +D H+G+ ENDP+ G+DS+ F EV+ LA +VD+++ GDLF KP
Sbjct: 4 PDPDTIRILITTDNHVGYNENDPITGDDSWKTFHEVMMLAKNNNVDMVVQSGDLFHVNKP 63
Query: 375 SVNCMFKCTEIIRKYCLGDKPVSIELLSD--QIKNFSR--TVNYEDPNLNISYPILSIHG 542
S +++ + +R C+GDKP +ELLSD Q+ ++ VNYEDPN NIS P+ I G
Sbjct: 64 SKKSLYQVLKTLRLCCMGDKPCELELLSDPSQVFHYDEFTNVNYEDPNFNISIPVFGISG 123
Query: 543 NHDDPVGQGSVSSLDILSITGLVNYFGKWTDYXPVRI 653
NHDD G + +DIL TGL+N+FGK + +++
Sbjct: 124 NHDDASGDSLLCPMDILHATGLINHFGKVIESDKIKV 160
>UniRef50_A5YZR9 Cluster: MRE11B; n=2; Magnoliophyta|Rep: MRE11B -
Zea mays (Maize)
Length = 672
Score = 147 bits (357), Expect = 3e-34
Identities = 70/144 (48%), Positives = 99/144 (68%), Gaps = 3/144 (2%)
Frame = +3
Query: 204 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 383
++LR+L+A+D HLG++E D VRG DSF FEE+ SLAV+ VD +LL G+LF + KPS +
Sbjct: 83 NSLRVLVATDCHLGYLEKDEVRGFDSFDTFEEICSLAVKNKVDFLLLCGNLFHENKPSNS 142
Query: 384 CMFKCTEIIRKYCLGDKPVSIELLSDQ---IKNFSRTVNYEDPNLNISYPILSIHGNHDD 554
+ K EI+R+YC+ D PV +++SDQ ++N VNYEDPN I P+ +IHG+ D
Sbjct: 143 TLVKAIEILRRYCMNDCPVQFQVISDQAASLQNRFCQVNYEDPNYKIGLPVFTIHGDQDY 202
Query: 555 PVGQGSVSSLDILSITGLVNYFGK 626
P G ++S DIL+ +NYFGK
Sbjct: 203 PTGTDNLSVNDILTAGNFLNYFGK 226
>UniRef50_Q6CEM3 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome B of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 701
Score = 146 bits (354), Expect = 6e-34
Identities = 67/154 (43%), Positives = 99/154 (64%), Gaps = 3/154 (1%)
Frame = +3
Query: 204 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 383
DT+RILI +D H+G+ E DP+RG+DS+ F E++ LA DVD++L GDLF KPS
Sbjct: 7 DTIRILITTDNHVGYNEQDPIRGDDSWKTFHEIMGLARTEDVDMVLQAGDLFHINKPSRK 66
Query: 384 CMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT---VNYEDPNLNISYPILSIHGNHDD 554
M++ +R C G++P +ELLSD +T +NYEDPN+N+S P+ +I GNHDD
Sbjct: 67 SMYQVIRSLRMNCYGERPCELELLSDPTLALDQTFNHLNYEDPNINVSVPVFAISGNHDD 126
Query: 555 PVGQGSVSSLDILSITGLVNYFGKWTDYXPVRIS 656
G + D+L+ TGL+N+FG+ T + ++
Sbjct: 127 SGGDAMLCPNDVLAATGLINHFGRVTQNDQITVT 160
>UniRef50_Q016A4 Cluster: Mre11 protein; n=3; Ostreococcus|Rep:
Mre11 protein - Ostreococcus tauri
Length = 1229
Score = 145 bits (352), Expect = 1e-33
Identities = 71/158 (44%), Positives = 102/158 (64%), Gaps = 15/158 (9%)
Frame = +3
Query: 198 PD-DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 374
PD +TLR+L+A+D HLGF E D VR +D+F AFEE+ A + D + + GD+FD KP
Sbjct: 473 PDPNTLRVLVATDTHLGFAERDAVRKDDAFAAFEEIFRHAREQKCDCVFMAGDVFDVNKP 532
Query: 375 SVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNF--------------SRTVNYEDPNLN 512
S + +C +++R+ GD V IE+LSD +NF + VNYEDP+ N
Sbjct: 533 SRETLVRCMDVLREATRGDGAVRIEVLSDTKENFPHRVHSPDGDVRPHAGIVNYEDPHTN 592
Query: 513 ISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGK 626
+ P+ SIHGNHDDP G+ ++S++D+L+ G+VNYFGK
Sbjct: 593 VELPVFSIHGNHDDPAGERNLSAMDVLASAGVVNYFGK 630
>UniRef50_A5DLP0 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 641
Score = 145 bits (352), Expect = 1e-33
Identities = 68/144 (47%), Positives = 95/144 (65%), Gaps = 3/144 (2%)
Frame = +3
Query: 204 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 383
+T+ ILI +D H+G+ ENDP+RG+DS FEE+ +A + DVD+++ GGDLF KPS
Sbjct: 12 NTISILITTDNHVGYHENDPIRGDDSGKTFEEITRIAKERDVDMVVQGGDLFHVNKPSKK 71
Query: 384 CMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT---VNYEDPNLNISYPILSIHGNHDD 554
+++ + +R CLGD+P +EL+SD + VNYED N NI P+ +I GNHDD
Sbjct: 72 SLYQVIKSLRSNCLGDRPCELELISDPSMALTLDFPGVNYEDENFNIGVPVFAISGNHDD 131
Query: 555 PVGQGSVSSLDILSITGLVNYFGK 626
G + LDIL+ +GLVNYFGK
Sbjct: 132 ATGDSLLLPLDILAASGLVNYFGK 155
>UniRef50_Q23255 Cluster: Double-strand break repair protein mre-11;
n=2; Caenorhabditis|Rep: Double-strand break repair
protein mre-11 - Caenorhabditis elegans
Length = 728
Score = 141 bits (342), Expect = 2e-32
Identities = 69/146 (47%), Positives = 99/146 (67%), Gaps = 4/146 (2%)
Frame = +3
Query: 201 DDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV 380
+D ++IL+A+DIH G+ EN D+ FEEVL +A + VD+ILLGGDLF + PS
Sbjct: 63 EDIIKILVATDIHCGYGENKANIHMDAVNTFEEVLQIATEQKVDMILLGGDLFHENNPSR 122
Query: 381 NCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSIHGNH 548
+ T+++R+YCL P+++E LSD NF+++ VNY D NLN+ PI +IHGNH
Sbjct: 123 EVQHRVTQLLRQYCLNGNPIALEFLSDASVNFNQSVFGHVNYYDQNLNVGLPIFTIHGNH 182
Query: 549 DDPVGQGSVSSLDILSITGLVNYFGK 626
DD G+G +++LD+L +GLVN FGK
Sbjct: 183 DDLSGKG-LTALDLLHESGLVNLFGK 207
>UniRef50_Q22G12 Cluster: Ser/Thr protein phosphatase family
protein; n=1; Tetrahymena thermophila SB210|Rep: Ser/Thr
protein phosphatase family protein - Tetrahymena
thermophila SB210
Length = 884
Score = 140 bits (338), Expect = 5e-32
Identities = 69/153 (45%), Positives = 103/153 (67%), Gaps = 1/153 (0%)
Frame = +3
Query: 201 DDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV 380
++T +IL+A+D H+G+ ENDP+RG DSF AFEEVL +A VD +LLGGDLF + PS
Sbjct: 21 ENTFKILVATDNHVGYKENDPIRGNDSFEAFEEVLKIAKSEKVDFLLLGGDLFHETNPSQ 80
Query: 381 NCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPV 560
C++K ++ Y LGD E+L I N++ VN++D NLNI PI IHGNHD P
Sbjct: 81 QCLYKMLNLLGNYVLGDG----EILYG-ISNYN-DVNFQDCNLNIELPIFVIHGNHDYPS 134
Query: 561 GQ-GSVSSLDILSITGLVNYFGKWTDYXPVRIS 656
+ G++S +D+L T +N+FGK+++ ++++
Sbjct: 135 DEYGNLSVIDLLHATKYLNHFGKFSNIEQIKVT 167
>UniRef50_UPI00015B5FB6 Cluster: PREDICTED: similar to
endo/exonuclease Mre11; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to endo/exonuclease Mre11 - Nasonia
vitripennis
Length = 450
Score = 139 bits (336), Expect = 9e-32
Identities = 68/155 (43%), Positives = 101/155 (65%), Gaps = 4/155 (2%)
Frame = +3
Query: 201 DDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV 380
++ +++L+A+DI+LG+ E R +DSF FEE+L A +VD IL G+LF +A P +
Sbjct: 24 ENIIQVLVAADINLGY-EQTVKREDDSFRTFEEILIYARDYEVDAILFAGNLFYEANPPL 82
Query: 381 NCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFS----RTVNYEDPNLNISYPILSIHGNH 548
N + +C ++RKYCL DKP I+ L+D F+ + N++DP LNI PI +IHG+
Sbjct: 83 NVITRCISLLRKYCLSDKPAKIDCLTDPEWIFNHCPDKIANFKDPKLNIGMPIFAIHGHR 142
Query: 549 DDPVGQGSVSSLDILSITGLVNYFGKWTDYXPVRI 653
D P+ G V +LD+L+ TGL+NYFGKW D + I
Sbjct: 143 DAPL-FGPVGALDLLAATGLINYFGKWPDKDKISI 176
>UniRef50_Q8SRV0 Cluster: DOUBLE-STRAND BREAK DNA REPAIR PROTEIN;
n=1; Encephalitozoon cuniculi|Rep: DOUBLE-STRAND BREAK
DNA REPAIR PROTEIN - Encephalitozoon cuniculi
Length = 567
Score = 132 bits (320), Expect = 8e-30
Identities = 64/140 (45%), Positives = 93/140 (66%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 389
++ILI SD HLG+ E+DPV +DS+ FEE+L +A + VDL+L GGDLF + +PS +C+
Sbjct: 1 MKILITSDNHLGYRESDPVLLDDSYDTFEEILGIAQRERVDLVLQGGDLFHENRPSRSCL 60
Query: 390 FKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQG 569
+ + R+YC+G++ + N + +N+ D N+ IS P++SIHGNHDDP G
Sbjct: 61 NRTIGLFRRYCIGNERSGLR------SNLA--LNFHDQNIGISIPVVSIHGNHDDPSGIS 112
Query: 570 SVSSLDILSITGLVNYFGKW 629
VS +DIL GLVNY GK+
Sbjct: 113 MVSPIDILQSAGLVNYIGKY 132
>UniRef50_Q0MR25 Cluster: MRE11-like protein; n=1; Penicillium
marneffei|Rep: MRE11-like protein - Penicillium
marneffei
Length = 731
Score = 122 bits (293), Expect = 2e-26
Identities = 58/150 (38%), Positives = 96/150 (64%)
Frame = +3
Query: 204 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 383
DT+RIL+++D H+G+ E DP+RG+DS+ F E++ LA + DVD++LL GDLF + N
Sbjct: 14 DTIRILVSTDNHVGYNERDPIRGDDSWKTFHEIMCLAKERDVDMVLLAGDLFHENNHPAN 73
Query: 384 CMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVG 563
C + Y +++ + VNYED ++N++ P+ SIHGNHDDP G
Sbjct: 74 ---PCIKSCAPYA--------QIVWGAFNH----VNYEDLDINVAIPVFSIHGNHDDPSG 118
Query: 564 QGSVSSLDILSITGLVNYFGKWTDYXPVRI 653
+G +++LDIL ++GL+NY+G+ + +++
Sbjct: 119 EGHLAALDILQVSGLLNYYGRTPESDNIQV 148
>UniRef50_Q86C23 Cluster: Mre11; n=2; Entamoeba histolytica|Rep:
Mre11 - Entamoeba histolytica
Length = 603
Score = 115 bits (276), Expect = 2e-24
Identities = 64/144 (44%), Positives = 80/144 (55%)
Frame = +3
Query: 204 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 383
+T +ILI SD HLG E +D ++AFEE+L A Q DVDLIL GD FD PS
Sbjct: 6 NTFKILICSDTHLGAGEKSHCLKDDCYLAFEEILQQANQEDVDLILHSGDFFDDQNPSKY 65
Query: 384 CMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVG 563
C+ K E++RKY +G S ++ N + N N I YP+ IHGNHD P G
Sbjct: 66 CLTKTMELMRKYLMGKPKNSFDVAYTYEHN--QEDNGFSMNQGIKYPMYVIHGNHDIPSG 123
Query: 564 QGSVSSLDILSITGLVNYFGKWTD 635
V+ LDIL GLVN+ GK D
Sbjct: 124 IEHVAGLDILQTAGLVNFIGKAED 147
>UniRef50_A0DUM4 Cluster: Chromosome undetermined scaffold_64, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_64,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1041
Score = 113 bits (271), Expect = 7e-24
Identities = 63/152 (41%), Positives = 92/152 (60%), Gaps = 5/152 (3%)
Frame = +3
Query: 213 RILIASDIHLGFMEN---DPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 383
+ L+ASD HLG EN R +D+F AFEEVL +A Q +VD ++LGGDLF + P+ +
Sbjct: 382 KFLVASDNHLGANENVGPKSNRYQDAFDAFEEVLQIASQQNVDFVILGGDLFHEKHPTEH 441
Query: 384 CMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVG 563
C+ KC +I++++ GD I++ ++ + + N+ N N+ PI I+GNHDD V
Sbjct: 442 CLLKCVDILQRHVFGDNFGGIQM---EVNSLNYQPNFSCSNFNVQLPIFIINGNHDDIVT 498
Query: 564 Q--GSVSSLDILSITGLVNYFGKWTDYXPVRI 653
+ SVS LDIL + +NY GK TD V I
Sbjct: 499 ERNESVSILDILHESKYLNYIGKITDQSNVCI 530
>UniRef50_A7AP02 Cluster: DNA repair protein (Mre11) family protein;
n=1; Babesia bovis|Rep: DNA repair protein (Mre11)
family protein - Babesia bovis
Length = 1040
Score = 107 bits (256), Expect = 5e-22
Identities = 60/159 (37%), Positives = 90/159 (56%), Gaps = 11/159 (6%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 389
LR +I +D HLG E DP+R DSF AF+EVL LA VD IL GDLFD + PS + +
Sbjct: 207 LRFMIFTDTHLGHKETDPIRENDSFNAFQEVLFLAKYLQVDGILHAGDLFDDSHPSRSVI 266
Query: 390 FKCTEIIRKYC-----LGDKPVSIEL-LSDQIKNFSR---TVNYEDPNL--NISYPILSI 536
++ E++R+YC P++I L S +++ ++ + + D + P I
Sbjct: 267 YRTMELLRRYCRKSDLTSPLPLNIRLPKSCAVRSETKRLEALKFIDGTITKEARVPFFVI 326
Query: 537 HGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYXPVRI 653
HGNHD+P +S +D+L ++GLV +FG TD V +
Sbjct: 327 HGNHDNPTTMNGLSPIDLLDVSGLVTFFGTVTDMTKVEV 365
>UniRef50_UPI000049A054 Cluster: DNA repair protein rad32; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DNA repair protein
rad32 - Entamoeba histolytica HM-1:IMSS
Length = 550
Score = 99.1 bits (236), Expect = 1e-19
Identities = 44/137 (32%), Positives = 78/137 (56%)
Frame = +3
Query: 207 TLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNC 386
++ + D HLG+ E + +D + FE+ L A Q + ++L GDLF+ +P+ +C
Sbjct: 2 SITFFVTGDNHLGYYEKNLTLKDDCYKLFEQYLKEATQKEGSILLQCGDLFNDLRPNKSC 61
Query: 387 MFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQ 566
+ K +I+KYC+GD + + + S +N DP +N+ +P+ +IHG +D+P G
Sbjct: 62 VSKTANLIKKYCIGDADIPYTIKDE--AELSYPLNITDPYINVKHPLFTIHGTNDEPSGY 119
Query: 567 GSVSSLDILSITGLVNY 617
++ +IL+ GLVNY
Sbjct: 120 KLIAGSEILASCGLVNY 136
>UniRef50_A2ECB0 Cluster: Ser/Thr protein phosphatase, putative;
n=1; Trichomonas vaginalis G3|Rep: Ser/Thr protein
phosphatase, putative - Trichomonas vaginalis G3
Length = 562
Score = 98.7 bits (235), Expect = 2e-19
Identities = 51/142 (35%), Positives = 80/142 (56%)
Frame = +3
Query: 195 SPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 374
S DT +I I +D H+G+ E D + +DSF AF+E + A + D+IL GD F++ P
Sbjct: 4 SQQDTFKIAIFTDTHIGYDEQDAITEKDSFRAFKECVQNAHIQNADIILHAGDFFNERNP 63
Query: 375 SVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDD 554
S + K +I+ ++ +G L S+ S N+ +PN+NI P +HGNHD
Sbjct: 64 SRYAVIKTMKILDEFVIGQGNPPEILYSE---GLSSDPNWLNPNINIKIPFFCMHGNHDA 120
Query: 555 PVGQGSVSSLDILSITGLVNYF 620
P G GS S + +LS++ +N+F
Sbjct: 121 PNGLGSTSPIQLLSVSKYLNFF 142
>UniRef50_Q4U965 Cluster: Double-strand break repair protein,
putative; n=2; Theileria|Rep: Double-strand break repair
protein, putative - Theileria annulata
Length = 870
Score = 95.1 bits (226), Expect = 2e-18
Identities = 67/195 (34%), Positives = 98/195 (50%), Gaps = 27/195 (13%)
Frame = +3
Query: 150 SCTSKIMIENDISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDV 329
S SK D+ D+ ++IL+ +D HLG+ E+DP RG DS FEE+L +A +V
Sbjct: 244 SDVSKEFEFKDLDESEDDNVVKILVFTDTHLGYKEDDPFRGNDSLNTFEELLFIAKHLEV 303
Query: 330 DLILLGGDLFDQAKPSVNCM-------------FKCTEIIRKYCLGD----KPVSIELLS 458
D IL GDLFD+ PS M ++ +++ Y L K E+ S
Sbjct: 304 DFILHSGDLFDKNMPSRTTMYLLIINSLMNGIRYRTMDLLSTYLLSSMSKIKVDKSEVES 363
Query: 459 DQIKNFSRTVNYEDPNLNISY----------PILSIHGNHDDPVGQGSVSSLDILSITGL 608
++ +F + V +P +++Y P IHGNHD+P Q S+S +DIL + GL
Sbjct: 364 AKLISFDKGV-ANNPLGDLAYSSGVSKEFLTPFFVIHGNHDNPTYQHSLSPIDILDVAGL 422
Query: 609 VNYFGKWTDYXPVRI 653
V YFG+ D V I
Sbjct: 423 VTYFGRVFDLENVVI 437
>UniRef50_Q7RBG7 Cluster: Rad32-related; n=6; Plasmodium
(Vinckeia)|Rep: Rad32-related - Plasmodium yoelii yoelii
Length = 1037
Score = 83.4 bits (197), Expect = 7e-15
Identities = 45/109 (41%), Positives = 68/109 (62%), Gaps = 2/109 (1%)
Frame = +3
Query: 204 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 383
DTL+IL+ +D HLG+ EN+P++ +D+F FEE+L +A + +VD+IL GDLF + K S
Sbjct: 303 DTLKILLCTDNHLGYKENNPIQKKDTFNTFEEILFIAKKLNVDMILNSGDLFHKNKVSEY 362
Query: 384 CMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSR-TVNYEDPN-LNISYP 524
+FK IIRKYC E + N + VN+ + N LN+++P
Sbjct: 363 TLFKTMSIIRKYCHVHNTKDDERYQNANLNMNHLNVNHLNVNHLNMNHP 411
Score = 45.6 bits (103), Expect = 0.002
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +3
Query: 516 SYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGK 626
S P +IHGNHD P + LDIL+I+ L+NY GK
Sbjct: 536 SIPFYTIHGNHDYPYSYDYICPLDILNISNLINYIGK 572
>UniRef50_A5K9T7 Cluster: DNA repair exonuclease, putative; n=1;
Plasmodium vivax|Rep: DNA repair exonuclease, putative -
Plasmodium vivax
Length = 1119
Score = 79.4 bits (187), Expect = 1e-13
Identities = 41/84 (48%), Positives = 56/84 (66%)
Frame = +3
Query: 171 IENDISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGG 350
I +S PD TL+IL+ +D HLG+ EN+ V+ ED+F +FEE+L +A +VDLIL G
Sbjct: 295 IRKSLSKNEPD-TLKILLCTDNHLGYKENNAVQKEDTFNSFEEILFVAKHLNVDLILNSG 353
Query: 351 DLFDQAKPSVNCMFKCTEIIRKYC 422
DLF + K S +FK IIR+YC
Sbjct: 354 DLFHKNKISEYTLFKSMAIIRRYC 377
Score = 43.2 bits (97), Expect = 0.009
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +3
Query: 522 PILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGK 626
P+ ++HGNHD P +S LDIL + L+NY GK
Sbjct: 549 PLFTMHGNHDYPYSCDYISPLDILHVGNLINYIGK 583
>UniRef50_Q8I263 Cluster: DNA repair exonuclease, putative; n=1;
Plasmodium falciparum 3D7|Rep: DNA repair exonuclease,
putative - Plasmodium falciparum (isolate 3D7)
Length = 1118
Score = 77.0 bits (181), Expect = 6e-13
Identities = 36/72 (50%), Positives = 52/72 (72%)
Frame = +3
Query: 207 TLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNC 386
TL+IL+ +D HLG+ EN+ ++ +DSF +FEE+L +A + +VD+IL GDLF + K S
Sbjct: 350 TLKILLCTDNHLGYKENNSIQKKDSFNSFEEILFIAKKLNVDMILNSGDLFHKNKVSEYT 409
Query: 387 MFKCTEIIRKYC 422
+FK IIRKYC
Sbjct: 410 LFKSMYIIRKYC 421
Score = 46.0 bits (104), Expect = 0.001
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +3
Query: 522 PILSIHGNHDDPVGQGSVSSLDILSITGLVNYFGK 626
P +IHGNHD P +S LDIL+I+ L+NY GK
Sbjct: 583 PFYTIHGNHDYPYSYEYISPLDILNISNLINYIGK 617
>UniRef50_A3FQD2 Cluster: DNA repair and meiosis protein Mre11; n=2;
Cryptosporidium|Rep: DNA repair and meiosis protein
Mre11 - Cryptosporidium parvum Iowa II
Length = 513
Score = 75.8 bits (178), Expect = 1e-12
Identities = 34/80 (42%), Positives = 47/80 (58%)
Frame = +3
Query: 387 MFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQ 566
M+K IIR+YC+G+K + L+ Q + N+E + N+S P IHGNHDDP +
Sbjct: 1 MYKVMNIIREYCMGNKQIKFRALNRQDSSNVNGYNWEVGDANVSIPFFGIHGNHDDPGEE 60
Query: 567 GSVSSLDILSITGLVNYFGK 626
G +S LDIL +NY GK
Sbjct: 61 GLLSPLDILESARFINYIGK 80
>UniRef50_Q8U1N9 Cluster: DNA double-strand break repair protein
mre11; n=4; Thermococcaceae|Rep: DNA double-strand break
repair protein mre11 - Pyrococcus furiosus
Length = 426
Score = 50.4 bits (115), Expect(2) = 8e-07
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = +3
Query: 228 SDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCMFKCTE 404
+DIHLG+ + + P R E+ AF+ L +AVQ +VD IL+ GDLF ++PS + K
Sbjct: 7 ADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIA 66
Query: 405 IIR 413
+++
Sbjct: 67 LLQ 69
Score = 25.8 bits (54), Expect(2) = 8e-07
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +3
Query: 516 SYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFG 623
S P+ +I GNHD Q S L++L GLV G
Sbjct: 75 SIPVFAIEGNHDRT--QRGPSVLNLLEDFGLVYVIG 108
>UniRef50_Q8PUY5 Cluster: DNA double-strand break repair protein
mre11; n=2; Methanosarcina|Rep: DNA double-strand break
repair protein mre11 - Methanosarcina mazei
(Methanosarcina frisia)
Length = 617
Score = 53.6 bits (123), Expect = 6e-06
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Frame = +3
Query: 201 DDTLRILIASDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPS 377
D +RIL +D HLG+ + + VR +D F AFE V+ AV VD ++ GDLFD P+
Sbjct: 2 DREIRILHTADTHLGYRQYHSEVRRQDFFKAFETVIKDAVDMQVDAVVHAGDLFDSRNPT 61
Query: 378 VNCMFKCTEIIRKYCLGDKP 437
+ + + ++ + + + P
Sbjct: 62 LEDLLETMNVLSRLKVANIP 81
>UniRef50_Q46FJ9 Cluster: DNA repair protein; n=1; Methanosarcina
barkeri str. Fusaro|Rep: DNA repair protein -
Methanosarcina barkeri (strain Fusaro / DSM 804)
Length = 776
Score = 53.2 bits (122), Expect = 8e-06
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +3
Query: 210 LRILIASDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNC 386
+RIL +D HLG+ + + VR D F AFE V++ AV+ VD ++ GDLFD P++
Sbjct: 5 IRILHTADTHLGYRQYHSEVRRNDFFAAFELVVNDAVEMQVDAVVHAGDLFDSRNPTLED 64
Query: 387 MFKCTEIIRKYCLGDKP 437
+ + ++ + D P
Sbjct: 65 LLETINLLSRLKAADIP 81
>UniRef50_Q2S4Q6 Cluster: Nuclease SbcCD, D subunit subfamily,
putative; n=1; Salinibacter ruber DSM 13855|Rep:
Nuclease SbcCD, D subunit subfamily, putative -
Salinibacter ruber (strain DSM 13855)
Length = 453
Score = 35.1 bits (77), Expect(2) = 5e-05
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Frame = +3
Query: 204 DTLRILIASDIHLGFM---ENDPVRGEDSFI-----AFEEVLSLAVQCDVDLILLGGDLF 359
D + +L +DIHLGF DP G ++ + + E V+ A+ DVD L GD +
Sbjct: 21 DVVTLLHTADIHLGFKTHGRRDPDTGLNTRLLDVRRSLEAVVQRALDADVDAFLFCGDAY 80
Query: 360 DQAKPSVNCMFKCTEIIRKYCLGDKPV 440
A P+ + +R D PV
Sbjct: 81 HTADPTPTQQDIFVQCLRPLADADIPV 107
Score = 35.1 bits (77), Expect(2) = 5e-05
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 501 PNLNISYPILSIHGNHDDPVGQGSVSSLDILS-ITGLVNYFGK 626
P + P++ I GNHD PV G SSLDI I G V+ + K
Sbjct: 99 PLADADIPVVLIVGNHDHPVTFGRASSLDIFDHIAGAVHCYRK 141
>UniRef50_A4ENU6 Cluster: Putative ATP-dependent dsDNA exonuclease;
n=2; Rhodobacteraceae|Rep: Putative ATP-dependent dsDNA
exonuclease - Roseobacter sp. SK209-2-6
Length = 380
Score = 49.6 bits (113), Expect = 1e-04
Identities = 23/60 (38%), Positives = 36/60 (60%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 389
+RIL +D+HLG N ED E++LS V DVD++++ GD+FD+A P + +
Sbjct: 1 MRILHTADLHLGRQFNGISLEEDHAAILEQILSAVVAHDVDVLIIAGDIFDRAAPPASAV 60
>UniRef50_A5YS39 Cluster: DNA double-strand break repair protein
mre11; n=1; uncultured haloarchaeon|Rep: DNA
double-strand break repair protein mre11 - uncultured
haloarchaeon
Length = 397
Score = 49.2 bits (112), Expect = 1e-04
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = +3
Query: 207 TLRILIASDIHLGFMEND-PVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 383
T IL SD HLG + + VR +D AF++ +S+A+Q DVD ++ GDLFD P++
Sbjct: 11 TTTILHISDTHLGNRQYEYDVRRDDFSDAFDQSVSIAIQEDVDAVIHTGDLFDTRDPTLP 70
Query: 384 CMFKCTEII 410
+ C +I+
Sbjct: 71 DINDCIDIL 79
>UniRef50_O29231 Cluster: DNA double-strand break repair protein
mre11; n=1; Archaeoglobus fulgidus|Rep: DNA
double-strand break repair protein mre11 - Archaeoglobus
fulgidus
Length = 443
Score = 49.2 bits (112), Expect = 1e-04
Identities = 37/126 (29%), Positives = 68/126 (53%), Gaps = 2/126 (1%)
Frame = +3
Query: 228 SDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCMFKCTE 404
+D+HLG+ + N P R ED AF+ + AV+ + D +++ GDLF ++ PS + + E
Sbjct: 7 ADVHLGYEQYNQPWRAEDFAKAFKVIAEKAVESNADFVVIAGDLFHRSLPSPRTIKEAVE 66
Query: 405 IIRKYCLGDKPV-SIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSS 581
+ + + PV ++E D+ SR ++ +L S +L++ G +PV +V S
Sbjct: 67 TLWMFRKENIPVFAVEGNHDKT---SRDISAY--HLLESLGLLNVLGLRRNPVRGENVES 121
Query: 582 LDILSI 599
L I ++
Sbjct: 122 LRIQNV 127
>UniRef50_Q9UZC9 Cluster: DNA double-strand break repair protein
mre11; n=1; Pyrococcus abyssi|Rep: DNA double-strand
break repair protein mre11 - Pyrococcus abyssi
Length = 423
Score = 45.2 bits (102), Expect(2) = 2e-04
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +3
Query: 228 SDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCMFKCTE 404
+D+HLG+ + N R E+ AFE+ + + V VD I++ GDLF+ ++PS + +
Sbjct: 17 ADVHLGYEQFNRSQRAEEFAKAFEDAIKICVDEKVDFIVIAGDLFNSSRPSPGTIKTAVK 76
Query: 405 IIR 413
I++
Sbjct: 77 ILQ 79
Score = 23.0 bits (47), Expect(2) = 2e-04
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 522 PILSIHGNHDDPVGQGSVSSLDILSITGLVNYFG 623
P+ +I GNHD Q S L +L GL+ G
Sbjct: 87 PVFAIEGNHDRT--QRGPSILHLLEDLGLLYVLG 118
>UniRef50_A2BM15 Cluster: Predicted DNA repair exonuclease; n=1;
Hyperthermus butylicus DSM 5456|Rep: Predicted DNA
repair exonuclease - Hyperthermus butylicus (strain DSM
5456 / JCM 9403)
Length = 407
Score = 47.2 bits (107), Expect = 5e-04
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRGE-DSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNC 386
L +L SD HLG+ + + E D + FEEV+ +A++ VD ++ GDLFD +P
Sbjct: 11 LHLLHVSDTHLGYRQYGIIEREMDFYQVFEEVIDIAIREHVDAVIHTGDLFDSTRPPAQA 70
Query: 387 MFKCTEIIRK 416
+ ++K
Sbjct: 71 IRAAIRALKK 80
>UniRef50_A3HX94 Cluster: DNA repair exonuclease; n=1; Algoriphagus
sp. PR1|Rep: DNA repair exonuclease - Algoriphagus sp.
PR1
Length = 414
Score = 46.8 bits (106), Expect = 7e-04
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP---SV 380
++IL +D HLG + R E+ + EE++ +A Q +VDL+LL GD+FD P +V
Sbjct: 2 IKILHTADWHLGKRLQEFSRIEEQKLVLEEIIEVADQENVDLVLLAGDIFDTFNPNHEAV 61
Query: 381 NCMFKCTEIIRKYCLGDKPV 440
++K + K G++P+
Sbjct: 62 ELLYKTLRRLSKN--GERPI 79
>UniRef50_Q2JK75 Cluster: Ser/Thr protein phosphatase family
protein; n=4; Synechococcus|Rep: Ser/Thr protein
phosphatase family protein - Synechococcus sp. (strain
JA-2-3B'a(2-13)) (Cyanobacteria bacteriumYellowstone
B-Prime)
Length = 430
Score = 46.4 bits (105), Expect = 0.001
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Frame = +3
Query: 207 TLRILIASDIHLGFMEND-PVRGEDSFIAFEEVLS-LAVQCDVDLILLGGDLFD--QAKP 374
T L +D+HLG+ D P R +D F+AF +V+ A+Q VD +L+ GDLF+ Q +P
Sbjct: 5 TCTFLHLADVHLGYDRYDSPERSKDFFLAFRDVVRRYAIQDPVDFVLIAGDLFEHRQIQP 64
Query: 375 SV 380
V
Sbjct: 65 GV 66
>UniRef50_Q3ISN6 Cluster: Conserved DNA repair operon protein; n=1;
Natronomonas pharaonis DSM 2160|Rep: Conserved DNA
repair operon protein - Natronomonas pharaonis (strain
DSM 2160 / ATCC 35678)
Length = 451
Score = 46.4 bits (105), Expect = 0.001
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +3
Query: 213 RILIASDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 389
R+L D H+G+ + + P R ED AF +V AV+ DVD ++ GDLF +P + +
Sbjct: 3 RVLHTGDTHIGYRQYHTPERREDFLSAFRQVADDAVEMDVDAVVHAGDLFHDRRPGLVDL 62
Query: 390 FKCTEII 410
+I+
Sbjct: 63 LGTVDIL 69
>UniRef50_Q12VW7 Cluster: Metallophosphoesterase; n=1;
Methanococcoides burtonii DSM 6242|Rep:
Metallophosphoesterase - Methanococcoides burtonii
(strain DSM 6242)
Length = 485
Score = 46.4 bits (105), Expect = 0.001
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +3
Query: 210 LRILIASDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNC 386
+RIL D H+G+ + + VR +D AF V+ A+ VD+++ GDLFD P++
Sbjct: 5 IRILHTGDTHIGYRQYHSEVRRQDFIDAFSSVIDDAIDMKVDVVVHAGDLFDSRNPTLED 64
Query: 387 MFKCTEIIRK 416
+ +++ K
Sbjct: 65 ILDTIKVLLK 74
>UniRef50_Q8DMQ1 Cluster: Tll0060 protein; n=1; Synechococcus
elongatus|Rep: Tll0060 protein - Synechococcus elongatus
(Thermosynechococcus elongatus)
Length = 428
Score = 44.0 bits (99), Expect = 0.005
Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 4/56 (7%)
Frame = +3
Query: 210 LRILIASDIHLGF---MENDPVRGEDSFIAFEEVL-SLAVQCDVDLILLGGDLFDQ 365
+R L +D+HLG+ +++P R D F AF+ L + A+Q VD +L+ GDLF++
Sbjct: 2 VRFLHVADVHLGYNKYRQDNPSRMLDFFRAFDSALETYAIQAQVDFVLIAGDLFEE 57
>UniRef50_Q8TXI3 Cluster: DNA double-strand break repair protein
mre11; n=1; Methanopyrus kandleri|Rep: DNA double-strand
break repair protein mre11 - Methanopyrus kandleri
Length = 451
Score = 44.0 bits (99), Expect = 0.005
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +3
Query: 210 LRILIASDIHLGF-MENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNC 386
+R+ +D+HLG + N R E FE ++ +C VD++++ GDLF+ A+P
Sbjct: 1 MRMAHVADVHLGHALMNLRSREEAVMETFERLMEEVRECSVDVLVIAGDLFEHARPKTEA 60
Query: 387 MFKCTE 404
++ E
Sbjct: 61 LYLAVE 66
>UniRef50_Q2NFC6 Cluster: DNA double-strand break repair protein
Mre11; n=1; Methanosphaera stadtmanae DSM 3091|Rep: DNA
double-strand break repair protein Mre11 -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 393
Score = 43.6 bits (98), Expect = 0.007
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 207 TLRILIASDIHLGFMENDPVRGEDSFI-AFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 383
T++I +D HLG+ + E+ F FE+++ + DVD +L GDLF+ KP +
Sbjct: 2 TIKIAHMADTHLGYKQYGLNERENDFYKTFEKIIDDIISKDVDYVLHAGDLFEHPKPPIK 61
Query: 384 CMFKCTEIIRKYCLGDKPVSI 446
+ + K + P+ +
Sbjct: 62 ALLVAQKGFEKLLENNIPIFV 82
>UniRef50_P62131 Cluster: DNA double-strand break repair protein
mre11; n=4; Methanococcus|Rep: DNA double-strand break
repair protein mre11 - Methanococcus maripaludis
Length = 372
Score = 36.3 bits (80), Expect(2) = 0.013
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +3
Query: 228 SDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCMFKCTE 404
+D HLG+ + N R D + +F E + ++ D ++ GDLF+ +P VN + E
Sbjct: 7 ADNHLGYRQYNLDERENDIYESFLECIDKIIEIRPDFVIHSGDLFESPQPPVNAIRCAME 66
Query: 405 IIRKYCLGDKPVSIELL 455
+ K L +K + I L+
Sbjct: 67 GLLK--LKEKNIPIYLI 81
Score = 25.4 bits (53), Expect(2) = 0.013
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 522 PILSIHGNHDDPVGQ 566
PI IHGNHD P Q
Sbjct: 77 PIYLIHGNHDIPKSQ 91
>UniRef50_A7BEB8 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 425
Score = 41.9 bits (94), Expect = 0.020
Identities = 23/79 (29%), Positives = 41/79 (51%)
Frame = +3
Query: 180 DISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLF 359
D+ A + IL SD HLG + G+ + E +++L + VD +L+ GD+F
Sbjct: 15 DVGALCHTGDMLILHTSDWHLGRTLHGASLGDSADAFIEWLVALVRERGVDAVLISGDVF 74
Query: 360 DQAKPSVNCMFKCTEIIRK 416
D+A P V+ + + +R+
Sbjct: 75 DRAVPPVDALARMRRALRE 93
>UniRef50_Q03B99 Cluster: DNA repair exonuclease; n=4;
Lactobacillus|Rep: DNA repair exonuclease -
Lactobacillus casei (strain ATCC 334)
Length = 373
Score = 41.5 bits (93), Expect = 0.026
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPS 377
+R L +D H+G ND ED FE+++ A VD I++ GDL+D+A PS
Sbjct: 1 MRFLHTADWHIGKKLNDFDLLEDQQAVFEQLVETAETHKVDAIVIAGDLYDRALPS 56
>UniRef50_O26641 Cluster: DNA double-strand break repair protein
mre11; n=1; Methanothermobacter thermautotrophicus str.
Delta H|Rep: DNA double-strand break repair protein
mre11 - Methanobacterium thermoautotrophicum
Length = 587
Score = 41.5 bits (93), Expect = 0.026
Identities = 24/73 (32%), Positives = 39/73 (53%)
Frame = +3
Query: 228 SDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCMFKCTEI 407
SD HLG ++ +R E F AF L A+Q DVD +++ GDLF P++ + + T
Sbjct: 177 SDCHLGAQKHPDLR-ELEFEAFRMALDDALQKDVDFMIIAGDLFHSNIPNMETVKRATLE 235
Query: 408 IRKYCLGDKPVSI 446
+R+ P+ +
Sbjct: 236 LRRVREAGVPIYV 248
>UniRef50_O67727 Cluster: ATP-dependent dsDNA exonuclease; n=1;
Aquifex aeolicus|Rep: ATP-dependent dsDNA exonuclease -
Aquifex aeolicus
Length = 379
Score = 41.1 bits (92), Expect = 0.035
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 374
+R++ SDIH G R ED A +V+ + DL+L+ GD+FD+A P
Sbjct: 1 MRLIHLSDIHAGKNLGRVSRNEDVVYALNQVVDFCKENKPDLVLVAGDVFDKANP 55
>UniRef50_Q0HTQ0 Cluster: Nuclease SbcCD, D subunit precursor; n=40;
Gammaproteobacteria|Rep: Nuclease SbcCD, D subunit
precursor - Shewanella sp. (strain MR-7)
Length = 400
Score = 41.1 bits (92), Expect = 0.035
Identities = 17/69 (24%), Positives = 39/69 (56%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 389
+R + SD H+G ++ ED +++++LA Q VD +++ GD++D++ P + +
Sbjct: 1 MRFIHTSDWHIGRQLHNQSLLEDQAYVLDQIVTLAEQHTVDAVIIAGDIYDRSIPPASAV 60
Query: 390 FKCTEIIRK 416
E++ +
Sbjct: 61 ALLDEVLNR 69
>UniRef50_Q9YFY8 Cluster: DNA double-strand break repair protein
mre11; n=1; Aeropyrum pernix|Rep: DNA double-strand
break repair protein mre11 - Aeropyrum pernix
Length = 409
Score = 41.1 bits (92), Expect = 0.035
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +3
Query: 213 RILIASDIHLGFMEND-PVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 389
++L +D+HLG R +D F +FE V+ A++ D +L+ GDLFD+ K + +
Sbjct: 3 KVLHVADVHLGARPYGLEERRDDIFRSFEFVVETALKDRPDAVLIAGDLFDKPKLPLRDV 62
Query: 390 FKCTEIIR 413
+ E++R
Sbjct: 63 KQAVELVR 70
>UniRef50_Q5LYZ3 Cluster: ATP-dependent dsDNA exonuclease; n=6;
Streptococcaceae|Rep: ATP-dependent dsDNA exonuclease -
Streptococcus thermophilus (strain CNRZ 1066)
Length = 408
Score = 40.7 bits (91), Expect = 0.046
Identities = 20/60 (33%), Positives = 36/60 (60%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 389
++ L SD H+G N E+ AF++++ LA+ VD +++ GDL+D+A P V+ +
Sbjct: 7 MKFLHTSDWHVGRTLNGWSLLEEQEWAFQQIVDLAISEKVDGVIISGDLYDRAVPPVDAI 66
>UniRef50_A6UUX3 Cluster: Metallophosphoesterase; n=1; Methanococcus
aeolicus Nankai-3|Rep: Metallophosphoesterase -
Methanococcus aeolicus Nankai-3
Length = 399
Score = 40.3 bits (90), Expect = 0.061
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +3
Query: 228 SDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCMFKCTE 404
SD HLG+ + N R +D + AF + + D ++ GDLF+Q+ P +N ++ +
Sbjct: 7 SDNHLGYRQYNLDEREKDMYNAFNMCIDEIINIKPDFVVHSGDLFEQSTPPINALYTAIK 66
Query: 405 IIRKYCLGDKPVSI 446
K + PV I
Sbjct: 67 AFEKLKECNIPVYI 80
>UniRef50_Q9HRW4 Cluster: DNA double-strand break repair protein
mre11; n=5; Halobacteriaceae|Rep: DNA double-strand
break repair protein mre11 - Halobacterium salinarium
(Halobacterium halobium)
Length = 387
Score = 40.3 bits (90), Expect = 0.061
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +3
Query: 213 RILIASDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 389
R++ D HLG+ + + P R +D AF+ V++ A+ VD ++ GDL+ +P + +
Sbjct: 3 RVIHTGDTHLGYQQYHAPQRRQDFLDAFDAVITDAIDEGVDAVVHAGDLYHDRQPGLRDI 62
Query: 390 FKCTEIIRKYCLGDKP 437
++R D P
Sbjct: 63 LDTIALLRPLQDADIP 78
>UniRef50_Q3A5P7 Cluster: DNA repair exonuclease; n=1; Pelobacter
carbinolicus DSM 2380|Rep: DNA repair exonuclease -
Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 370
Score = 39.9 bits (89), Expect = 0.080
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = +3
Query: 210 LRILIASDIHLGFM-----ENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 374
+RIL +DIHLG + E R D AFE ++ LA+ V L+++ GDLF P
Sbjct: 2 IRILHTADIHLGAVFAELAECAAARRNDQLYAFERMVELAIDRKVHLLVVAGDLFASPWP 61
Query: 375 SVNCMFKCTEIIRKYC 422
+ + + ++ C
Sbjct: 62 TTDLVSHVRAGFQRLC 77
>UniRef50_Q7QVF9 Cluster: GLP_90_7352_9805; n=3; Giardia
intestinalis|Rep: GLP_90_7352_9805 - Giardia lamblia
ATCC 50803
Length = 817
Score = 39.9 bits (89), Expect = 0.080
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +3
Query: 213 RILIASDIHLGFMEND--PVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNC 386
RI + +D HLGF P ++++ EE L LA + IL GD F+Q + S
Sbjct: 9 RIALFTDTHLGFTAPSARPCNAHENYLLLEECLCLARKLGAHAILHAGDFFNQNRLSSKK 68
Query: 387 MFKCTEIIRKY 419
+ K +R+Y
Sbjct: 69 VIKAICALRRY 79
>UniRef50_A0RW71 Cluster: DNA repair exonuclease; n=1; Cenarchaeum
symbiosum|Rep: DNA repair exonuclease - Cenarchaeum
symbiosum
Length = 417
Score = 39.9 bits (89), Expect = 0.080
Identities = 19/50 (38%), Positives = 31/50 (62%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLF 359
+R ASDIHLGF + ++G + + FE+V+ + VD +L+ GD+F
Sbjct: 1 MRFAHASDIHLGFQDGAALQGIEREV-FEKVIDGCISRKVDFVLMPGDIF 49
>UniRef50_UPI00015BCD31 Cluster: UPI00015BCD31 related cluster; n=1;
unknown|Rep: UPI00015BCD31 UniRef100 entry - unknown
Length = 380
Score = 39.5 bits (88), Expect = 0.11
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 374
++ L DIH G + R +D+ A +V+ + VD IL+ GD+FDQ P
Sbjct: 2 IKFLHIGDIHAGKTLHSRSRNDDAEYAISQVIDFVKKEPVDFILMAGDIFDQYTP 56
>UniRef50_Q88WS0 Cluster: Exonuclease SbcD; n=2;
Lactobacillales|Rep: Exonuclease SbcD - Lactobacillus
plantarum
Length = 393
Score = 39.5 bits (88), Expect = 0.11
Identities = 18/60 (30%), Positives = 38/60 (63%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 389
+++L +D H+G N ++ AF+++L++A+ VD I++ GD++D+A PS + +
Sbjct: 1 MKLLHTADWHIGRTLNGYSLLDEQEAAFKQILTIALAEKVDGIVIAGDIYDRAVPSTDAV 60
>UniRef50_A7DNM9 Cluster: Metallophosphoesterase; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep:
Metallophosphoesterase - Candidatus Nitrosopumilus
maritimus SCM1
Length = 415
Score = 39.5 bits (88), Expect = 0.11
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +3
Query: 228 SDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV 380
SDIHLGF + ++ + + FEEV+ ++ VD +L+ GDLF + P +
Sbjct: 8 SDIHLGFQDKKELQKIEQEV-FEEVVCTCIKQKVDFVLITGDLFHRNLPEM 57
>UniRef50_A5UJE8 Cluster: DNA repair exonuclease
(SbcD/Mre11-family), Rad32; n=1; Methanobrevibacter
smithii ATCC 35061|Rep: DNA repair exonuclease
(SbcD/Mre11-family), Rad32 - Methanobrevibacter smithii
(strain PS / ATCC 35061 / DSM 861)
Length = 407
Score = 39.5 bits (88), Expect = 0.11
Identities = 17/55 (30%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +3
Query: 228 SDIHLGFMENDPV-RGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 389
+D HLG+ + + R +D + F++++ ++ VD ++ GDLFD A+PS + +
Sbjct: 7 ADTHLGYRQFGLLEREKDFYEVFDKIIDKIIEEKVDFVIHSGDLFDSARPSPSAL 61
>UniRef50_A7HL21 Cluster: Metallophosphoesterase; n=1;
Fervidobacterium nodosum Rt17-B1|Rep:
Metallophosphoesterase - Fervidobacterium nodosum
Rt17-B1
Length = 397
Score = 39.1 bits (87), Expect = 0.14
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Frame = +3
Query: 210 LRILIASDIHLG------FMEND--PVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQ 365
++IL SD HLG EN R D F A E ++ A++ +VDL ++ GDLFD
Sbjct: 1 MKILHTSDWHLGKRPVGGIGENSYSDFRYNDYFNAAEYIVDRAIEENVDLFIIAGDLFDS 60
Query: 366 AKPSVNCMFKCTEIIRKYCLGDKPV 440
K + + + + I++K D PV
Sbjct: 61 NKINPDILERTEGILKKLKDKDIPV 85
>UniRef50_A3H5S8 Cluster: Metallophosphoesterase; n=1; Caldivirga
maquilingensis IC-167|Rep: Metallophosphoesterase -
Caldivirga maquilingensis IC-167
Length = 405
Score = 39.1 bits (87), Expect = 0.14
Identities = 44/148 (29%), Positives = 62/148 (41%), Gaps = 6/148 (4%)
Frame = +3
Query: 228 SDIHLGFMEND-PVRGEDSFIAF----EEVLSLAVQCDVDLILLGGDLFDQAKPSVNCMF 392
SD+HLG + R D AF E++ L + VD++L+ GDLFD +PS +
Sbjct: 7 SDVHLGRRQYGLEARARDYEAAFLNAISEIIKLREERGVDVVLVTGDLFDNPRPSPSTYL 66
Query: 393 KCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQGS 572
IK FSR D LN ++ GNHD V
Sbjct: 67 TA----------------------IKGFSR---LRDSGLN----VIITRGNHDASVINPV 97
Query: 573 VSSLDILSITGLVNYFG-KWTDYXPVRI 653
+ + +LS +GLV Y + DY +RI
Sbjct: 98 DNPISVLSSSGLVKYLDLDYIDYGKLRI 125
>UniRef50_Q9AN75 Cluster: ID473; n=1; Bradyrhizobium japonicum|Rep:
ID473 - Bradyrhizobium japonicum
Length = 173
Score = 38.7 bits (86), Expect = 0.19
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPS 377
+RIL +D H+G R + FE + + V+ DVD +++ GD+FD PS
Sbjct: 2 IRILHTADWHIGQTLRGFSREHEHRKVFERLEEIVVERDVDALIIAGDVFDSQNPS 57
>UniRef50_Q2AE44 Cluster: Metallophosphoesterase; n=1;
Halothermothrix orenii H 168|Rep: Metallophosphoesterase
- Halothermothrix orenii H 168
Length = 464
Score = 38.7 bits (86), Expect = 0.19
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 9/108 (8%)
Frame = +3
Query: 204 DTLRILIASDIHLGFMENDPVR-----GE----DSFIAFEEVLSLAVQCDVDLILLGGDL 356
D L+ + ASDIHLG + + GE ++ AF + + A++ +VD ++L GD+
Sbjct: 8 DELKFIHASDIHLGSVLHTGTTHKGDIGEIVKKATYKAFSRICNHAIEFEVDFVVLSGDI 67
Query: 357 FDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYED 500
FD+ SV M ++ L +K + + L++ VN D
Sbjct: 68 FDRESKSVVAMKHFIGECKR--LNEKGIPVYLIAGNHDPLREQVNIMD 113
>UniRef50_A6TVN1 Cluster: Nuclease SbcCD, D subunit; n=3;
Clostridiaceae|Rep: Nuclease SbcCD, D subunit -
Alkaliphilus metalliredigens QYMF
Length = 406
Score = 38.7 bits (86), Expect = 0.19
Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Frame = +3
Query: 210 LRILIASDIHLG--FMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 383
++IL SD HLG N + ++ F+ EE++++ + ++DLIL+ GD++D + P
Sbjct: 1 MKILHTSDWHLGKTLEGNSRLAEQERFL--EELVTIVNEKEIDLILVAGDIYDTSNPPAQ 58
Query: 384 CMFKCTEIIRKYCL-GDKPVSI 446
+ ++K G +P+ I
Sbjct: 59 AERLFYDSVKKLSANGQRPIII 80
>UniRef50_UPI00015BAD8F Cluster: metallophosphoesterase; n=1;
Ignicoccus hospitalis KIN4/I|Rep: metallophosphoesterase
- Ignicoccus hospitalis KIN4/I
Length = 384
Score = 38.3 bits (85), Expect = 0.25
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +3
Query: 216 ILIASDIHLGFMEND-PVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 374
I+ A+D+HLG + R ED + AFE+++ ++ D +++ GDLFD P
Sbjct: 3 IVHAADVHLGKRQYGLKEREEDFYKAFEDLVEATIREKADALVIAGDLFDTPVP 56
>UniRef50_Q5XUC9 Cluster: Zona pellucida C related protein; n=4;
Danio rerio|Rep: Zona pellucida C related protein -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 552
Score = 38.3 bits (85), Expect = 0.25
Identities = 21/83 (25%), Positives = 40/83 (48%)
Frame = +3
Query: 168 MIENDISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLG 347
++E+D+S W P D + S++ + + P + E + FE V L + D+ L
Sbjct: 393 VVEDDLSMWDPKD---FYLMSELDMKPVGGAPSKPEKPHLNFESVFDLPLNDQPDINLAP 449
Query: 348 GDLFDQAKPSVNCMFKCTEIIRK 416
+F+ AK +F+ E++ K
Sbjct: 450 EKVFESAKEKDETVFRQVEVVFK 472
>UniRef50_Q2AI56 Cluster: Exonuclease SbcD; n=1; Halothermothrix
orenii H 168|Rep: Exonuclease SbcD - Halothermothrix
orenii H 168
Length = 435
Score = 38.3 bits (85), Expect = 0.25
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 374
LRIL +D HLG R E+ EE++ +A VD++L+ GD+FD P
Sbjct: 27 LRILHTADWHLGKHLEGWSRYEEQKEFVEEIIEIADDNKVDMVLICGDIFDTTNP 81
>UniRef50_Q67MD2 Cluster: DNA repair exonuclease; n=1;
Symbiobacterium thermophilum|Rep: DNA repair exonuclease
- Symbiobacterium thermophilum
Length = 411
Score = 37.9 bits (84), Expect = 0.32
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPS 377
+RIL +D HLG R E+ +E+ ++ + +DL+L+ GD+FD PS
Sbjct: 1 MRILHTADWHLGRTLEGRSRQEEHEAFVDELCAMVREERIDLVLIAGDVFDTGNPS 56
>UniRef50_A4YET4 Cluster: Metallophosphoesterase; n=1;
Metallosphaera sedula DSM 5348|Rep:
Metallophosphoesterase - Metallosphaera sedula DSM 5348
Length = 379
Score = 37.9 bits (84), Expect = 0.32
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +3
Query: 216 ILIASDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 374
IL SD HLG N R +D + F +++ LA++ V I+ GDLFD KP
Sbjct: 2 ILHISDTHLGSRRYNRDSREQDVYDVFSQLIDLAIREHVRAIVHSGDLFDVYKP 55
>UniRef50_Q3ICS5 Cluster: Exonuclease sbcCD subunit D; n=2;
Alteromonadales|Rep: Exonuclease sbcCD subunit D -
Pseudoalteromonas haloplanktis (strain TAC 125)
Length = 415
Score = 37.5 bits (83), Expect = 0.43
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV--- 380
+++L SD HLG + R + F +L+ V+ +DL+L+ GD++ A PS
Sbjct: 1 MKVLHTSDWHLGQQFYEYDRRHEHLAFFTWLLATLVEQQIDLLLVAGDIYHTATPSASAE 60
Query: 381 NCMFKCTEIIRKYC 422
N +++ + +K C
Sbjct: 61 NQLYQFIKDAKKQC 74
>UniRef50_Q6I2G3 Cluster: DNA repair exonuclease family protein;
n=11; Bacillus cereus group|Rep: DNA repair exonuclease
family protein - Bacillus anthracis
Length = 432
Score = 37.5 bits (83), Expect = 0.43
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +3
Query: 273 EDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCMFKCTEIIRKYCLGDKPVSI 446
+ +F +FE ++ A+Q VD +LL GDL+D S+ E +++ D PV I
Sbjct: 54 QSTFESFERIIDKAIQERVDFVLLAGDLYDAETRSLRAQVFVREQMKRLSQYDIPVFI 111
>UniRef50_A7HCA1 Cluster: Nuclease SbcCD, D subunit; n=1;
Anaeromyxobacter sp. Fw109-5|Rep: Nuclease SbcCD, D
subunit - Anaeromyxobacter sp. Fw109-5
Length = 386
Score = 37.5 bits (83), Expect = 0.43
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 374
LRIL SD HLG ++ ED A E + + + D +L+ GD+FD+A P
Sbjct: 8 LRILHTSDWHLGRALHEESLLEDQAWALERLREVLREARPDALLIAGDVFDRAVP 62
>UniRef50_A6Q875 Cluster: DNA double-strand break repair protein;
n=1; Sulfurovum sp. NBC37-1|Rep: DNA double-strand break
repair protein - Sulfurovum sp. (strain NBC37-1)
Length = 373
Score = 37.5 bits (83), Expect = 0.43
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRGE-------DSFIAFEEVLSLAVQCDVDLILLGGDLFDQA 368
++I+ SD HLGF + D E D + AFE+V++ + D + GDLF +A
Sbjct: 1 MKIIHFSDTHLGFSDLDITNEEGINQREADFYKAFEDVINAIIDSRPDYAIHTGDLFHRA 60
Query: 369 KPSVNCM-FKCTEIIR 413
PS + F T++ R
Sbjct: 61 SPSNRAITFALTQLKR 76
>UniRef50_A6P235 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 380
Score = 37.5 bits (83), Expect = 0.43
Identities = 18/60 (30%), Positives = 33/60 (55%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 389
++++ SD+HLG ND ED E+L + + D +L+ GD++D++ PS +
Sbjct: 1 MKLIHLSDLHLGKRVNDFSMLEDQQYILAEILQIIDREKPDGVLIAGDVYDKSVPSAEAV 60
>UniRef50_Q8TNC7 Cluster: Phosphoesterase; n=2; Methanosarcina|Rep:
Phosphoesterase - Methanosarcina acetivorans
Length = 443
Score = 37.5 bits (83), Expect = 0.43
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Frame = +3
Query: 207 TLRILIASDIHL-----GFMENDPVRGED----SFIAFEEVLSLAVQCDVDLILLGGDLF 359
TL + A+D+HL G D GE +F A+E ++ L ++ +VD +L+ GD++
Sbjct: 21 TLSFVHAADLHLDSPFVGISGIDQELGERLAKATFQAYEAIIELCMEEEVDFLLIAGDVY 80
Query: 360 DQAKPSVNCMFKCTEIIRK 416
D A ++ + E +RK
Sbjct: 81 DSADKNLYAQVRFIEGLRK 99
>UniRef50_Q2B178 Cluster: DNA repair exonuclease family protein;
n=1; Bacillus sp. NRRL B-14911|Rep: DNA repair
exonuclease family protein - Bacillus sp. NRRL B-14911
Length = 406
Score = 31.9 bits (69), Expect(2) = 0.55
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 273 EDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCMFKCTEIIRKYCLGDKPV 440
E +F A + ++ A+ VD ++L GDLFD S+ + + + + + PV
Sbjct: 34 ESTFAALKNIVDAALARKVDFVILAGDLFDGEDRSIKAQARLRKEMNRLAEKNIPV 89
Score = 24.2 bits (50), Expect(2) = 0.55
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 522 PILSIHGNHDDPVGQGSVSSL 584
P+ ++HGNHD G S SL
Sbjct: 88 PVYAVHGNHDHFEGTWSHISL 108
>UniRef50_Q8Y6N8 Cluster: Lmo1646 protein; n=12; Listeria|Rep:
Lmo1646 protein - Listeria monocytogenes
Length = 374
Score = 37.1 bits (82), Expect = 0.57
Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +3
Query: 210 LRILIASDIHLG-FMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNC 386
++ L +D+HLG + + E +I ++ +A + VD ++L GDL+D+A P +
Sbjct: 1 MKFLHTADLHLGKIVSGVSMLAEQEYI-LTQITQIAEEEQVDALILAGDLYDRAVPPADA 59
Query: 387 MFKCTEIIRKY 419
+ +I+ K+
Sbjct: 60 VKVLNDILVKW 70
>UniRef50_Q1FMZ5 Cluster: Nuclease SbcCD, D subunit; n=1;
Clostridium phytofermentans ISDg|Rep: Nuclease SbcCD, D
subunit - Clostridium phytofermentans ISDg
Length = 375
Score = 37.1 bits (82), Expect = 0.57
Identities = 16/57 (28%), Positives = 33/57 (57%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV 380
++ + SD+H+G N+ ED +++L LA + D +L+ GD++D+ P++
Sbjct: 1 MKFMHLSDLHIGKRVNEFSMIEDQTYILQKILELADEEKPDAVLIAGDVYDKNLPTI 57
>UniRef50_A0LM47 Cluster: Nuclease SbcCD, D subunit; n=1;
Syntrophobacter fumaroxidans MPOB|Rep: Nuclease SbcCD, D
subunit - Syntrophobacter fumaroxidans (strain DSM 10017
/ MPOB)
Length = 383
Score = 37.1 bits (82), Expect = 0.57
Identities = 19/73 (26%), Positives = 38/73 (52%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 389
+RIL +D HLG + + D + ++ LA + D++L+ GD++D+A P + +
Sbjct: 1 MRILHTADWHLGRIFHGVHLTADQAFVLDRLVRLASESKPDVVLVSGDVYDRAVPPPDAV 60
Query: 390 FKCTEIIRKYCLG 428
+ + + LG
Sbjct: 61 ALLDDTLSRLVLG 73
>UniRef50_Q6L2H7 Cluster: DNA repair protein; n=2;
Thermoplasmatales|Rep: DNA repair protein - Picrophilus
torridus
Length = 370
Score = 37.1 bits (82), Expect = 0.57
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRGEDSFI-AFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNC 386
+R + SD HLG+ + E+ F AF E + + + VD + GDLFD PS
Sbjct: 2 VRFIHFSDTHLGYKQYMMDERENDFYEAFNEAIDIGINEHVDFFVHSGDLFDTWLPSNRA 61
Query: 387 M 389
M
Sbjct: 62 M 62
>UniRef50_P62132 Cluster: DNA double-strand break repair protein
mre11; n=1; Nanoarchaeum equitans|Rep: DNA double-strand
break repair protein mre11 - Nanoarchaeum equitans
Length = 361
Score = 37.1 bits (82), Expect = 0.57
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +3
Query: 216 ILIASDIHLG-FMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPS 377
I SD+HLG N E S+ A ++ ++ DL+L+GGD+FD+ K S
Sbjct: 2 IAFISDLHLGNIYANKKETEEHSYNALAKIEEKLLEYQPDLVLVGGDIFDKNKVS 56
>UniRef50_A1S175 Cluster: Metallophosphoesterase precursor; n=1;
Thermofilum pendens Hrk 5|Rep: Metallophosphoesterase
precursor - Thermofilum pendens (strain Hrk 5)
Length = 706
Score = 29.1 bits (62), Expect(2) = 0.91
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 474 FSRTVNYEDPNLNISYPILSIHGNHDDP 557
+++ V+YE L S+PI ++ GNHD P
Sbjct: 201 YAQAVSYEQAFL-YSFPIFAVPGNHDHP 227
Score = 26.2 bits (55), Expect(2) = 0.91
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +3
Query: 171 IENDISAW---SPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLIL 341
+E S W S LRI+ SD H G + D + G+ + A V SL DL++
Sbjct: 131 VEMPRSVWVLPSTPTKLRIVHVSDQHYGAGQPDVITGDMNRFAGYLVASL---LGPDLVI 187
Query: 342 LGGDLFDQA 368
GD+ D A
Sbjct: 188 DTGDIADTA 196
>UniRef50_Q830T2 Cluster: Exonuclease SbcD; n=3;
Lactobacillales|Rep: Exonuclease SbcD - Enterococcus
faecalis (Streptococcus faecalis)
Length = 378
Score = 36.3 bits (80), Expect = 0.99
Identities = 13/34 (38%), Positives = 26/34 (76%)
Frame = +3
Query: 288 AFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 389
AFE++L++A + VD +++ GDL+D++ P+V +
Sbjct: 27 AFEQILAIAKEEQVDAVVIAGDLYDRSVPAVEAV 60
>UniRef50_Q74D96 Cluster: Nuclease SbcCD, D subunit, putative; n=2;
Geobacter|Rep: Nuclease SbcCD, D subunit, putative -
Geobacter sulfurreducens
Length = 376
Score = 36.3 bits (80), Expect = 0.99
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Frame = +3
Query: 210 LRILIASDIHLG-----FMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFD 362
+R L +D+HL F + R D F+ +++LA++ +VD IL+ GDLFD
Sbjct: 3 IRFLHTADLHLDSPLRTFGDLARERRRDFLKTFDRIVNLAIKREVDCILIAGDLFD 58
>UniRef50_Q2RL80 Cluster: Metallophosphoesterase; n=1; Moorella
thermoacetica ATCC 39073|Rep: Metallophosphoesterase -
Moorella thermoacetica (strain ATCC 39073)
Length = 374
Score = 36.3 bits (80), Expect = 0.99
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Frame = +3
Query: 213 RILIASDIHLGFMEN--DPVRGEDSFIAFEEVLSLAVQCDVD------LILLGGDLFDQA 368
R+L +D+HLG+ + PVR E+ + A VL AV +D L+L+ GDLFD
Sbjct: 3 RVLHLADLHLGYRPDLPAPVR-EEVYRARNRVLQAAVDLALDPRQGISLVLIAGDLFDNH 61
Query: 369 KPSVN 383
+P +
Sbjct: 62 RPEAS 66
>UniRef50_Q3ADJ2 Cluster: Ser/Thr protein phosphatase family
protein; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: Ser/Thr protein phosphatase family protein -
Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 331
Score = 35.9 bits (79), Expect = 1.3
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRGEDSFIA-----FEEVLSLAVQCDVDLILLGGDLFDQAKP 374
+R L +D H F N P D F EEV+ +A V+ +L GGDLF+ P
Sbjct: 1 MRFLYITDTH--FRGNSPQNRMDDFPQTLRKKMEEVVQVAQDLQVEAVLHGGDLFEIPNP 58
Query: 375 SVN 383
+VN
Sbjct: 59 AVN 61
>UniRef50_A5ZTK8 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus obeum ATCC 29174|Rep: Putative
uncharacterized protein - Ruminococcus obeum ATCC 29174
Length = 405
Score = 35.9 bits (79), Expect = 1.3
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +3
Query: 228 SDIHLGF-MENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 389
SD+H+G + N +R + +I +E+ LA + D +++ GD++D+A PS +
Sbjct: 30 SDLHIGLKLMNRDLREDQEYI-LDEITELARRKRPDAVVIAGDIYDKAVPSAEAV 83
>UniRef50_A0P1W8 Cluster: Putative DNA repair exonuclease; n=1;
Stappia aggregata IAM 12614|Rep: Putative DNA repair
exonuclease - Stappia aggregata IAM 12614
Length = 392
Score = 35.9 bits (79), Expect = 1.3
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Frame = +3
Query: 210 LRILIASDIHLGF------MENDPVRG---EDSFIAFEEVLSLAVQCDVDLILLGGDLFD 362
+R+L ++DIHLG M N + + + AF + LA+ VD ++L GD+FD
Sbjct: 1 MRLLASADIHLGSPIRSAAMRNPELGDRLKQATRNAFIRTVDLAISESVDALVLAGDIFD 60
Query: 363 QAKPSV-NCMFKCTEIIR 413
+ +P + C F ++ R
Sbjct: 61 KDQPDLKTCAFLLAQLTR 78
>UniRef50_Q9X1X0 Cluster: Exonuclease, putative; n=3;
Thermotoga|Rep: Exonuclease, putative - Thermotoga
maritima
Length = 385
Score = 35.5 bits (78), Expect = 1.7
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Frame = +3
Query: 210 LRILIASDIHLG---FMENDPV-RGEDSFIAFEEVLSLAVQCDVDLILLGGDLF-DQAKP 374
L+IL SD HLG + + PV R E+ A ++V+ A + +VDLILL GDL + P
Sbjct: 7 LKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNP 66
Query: 375 SVNCMFKCTEIIRK 416
SV + + +++
Sbjct: 67 SVVALHDLLDYLKR 80
>UniRef50_Q897Z1 Cluster: Exonuclease sbcD; n=2; Clostridium|Rep:
Exonuclease sbcD - Clostridium tetani
Length = 391
Score = 35.5 bits (78), Expect = 1.7
Identities = 29/116 (25%), Positives = 57/116 (49%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 389
++I+ D H+G + N+ ED I E+++++ + + +++ GDL+D++ P V
Sbjct: 1 MKIIHTGDWHIGKIVNEFSMIEDQKIVLEQLINIIKEEKPNALIIAGDLYDRSIPPVE-- 58
Query: 390 FKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDP 557
++ELL + F++ + L++ PIL+I GNHD P
Sbjct: 59 -----------------AVELLD---RTFNKIL------LDLKVPILAIAGNHDSP 88
>UniRef50_Q3W6X0 Cluster: Exonuclease SbcD; n=3;
Actinomycetales|Rep: Exonuclease SbcD - Frankia sp.
EAN1pec
Length = 387
Score = 35.5 bits (78), Expect = 1.7
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 374
++ L SD HLG R ++ E++ +A + +VD +L+ GD++D A P
Sbjct: 1 MKFLHTSDWHLGKTLKGRNRLDEQRAVLGEIIGIARKHEVDAVLVAGDVYDSAAP 55
>UniRef50_Q04FF3 Cluster: DNA repair exonuclease; n=2; Oenococcus
oeni|Rep: DNA repair exonuclease - Oenococcus oeni
(strain BAA-331 / PSU-1)
Length = 413
Score = 35.5 bits (78), Expect = 1.7
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +3
Query: 279 SFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPS 377
+F AF V+ LAV VD +L GDLFD ++ S
Sbjct: 45 TFTAFSNVIKLAVDRHVDFVLFPGDLFDSSQQS 77
>UniRef50_Q5SIS5 Cluster: Exonuclease SbcD; n=2; Thermus
thermophilus|Rep: Exonuclease SbcD - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 372
Score = 35.1 bits (77), Expect = 2.3
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPS 377
+R+L +D HLG + R + A ++L L VDL+++ GDLFD+ + S
Sbjct: 1 MRLLHTADWHLGKLLKGVDRTPEIAAALRDLLGLVRSERVDLVVVSGDLFDRPQVS 56
>UniRef50_A5EW10 Cluster: Exonuclease SbcD; n=1; Dichelobacter
nodosus VCS1703A|Rep: Exonuclease SbcD - Dichelobacter
nodosus (strain VCS1703A)
Length = 396
Score = 35.1 bits (77), Expect = 2.3
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 383
++IL ++D HLG + R + + L + D++LL GD+FD A P V+
Sbjct: 1 MKILHSADWHLGAKLHGQSRESEQQAFLDWFLETLARVQPDILLLAGDIFDTATPPVS 58
>UniRef50_A1R7R7 Cluster: Putative nuclease SbcCD, D subunit; n=1;
Arthrobacter aurescens TC1|Rep: Putative nuclease SbcCD,
D subunit - Arthrobacter aurescens (strain TC1)
Length = 396
Score = 35.1 bits (77), Expect = 2.3
Identities = 19/60 (31%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Frame = +3
Query: 210 LRILIASDIHLG--FMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 383
+R+L SD HLG F + + +F+ ++++SL VD++L+ GD++D+A P ++
Sbjct: 1 MRLLHTSDWHLGRSFHGVGMLDAQRNFV--DQLVSLVQSKSVDVVLIAGDVYDRALPGLD 58
>UniRef50_A1S0I8 Cluster: Metallophosphoesterase; n=1; Thermofilum
pendens Hrk 5|Rep: Metallophosphoesterase - Thermofilum
pendens (strain Hrk 5)
Length = 391
Score = 35.1 bits (77), Expect = 2.3
Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +3
Query: 204 DTLRILIASDIHLG--FMENDPV---RGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQA 368
+ LRI+ +D HL F P R ED AF V+ AV+ L L+ GDLFD
Sbjct: 2 EVLRIVHTADNHLDPKFTFLGPKVRDRREDFLNAFRRVVDFAVEAKPHLFLVSGDLFDSV 61
Query: 369 KP 374
P
Sbjct: 62 NP 63
>UniRef50_A4J7M8 Cluster: Metallophosphoesterase; n=1;
Desulfotomaculum reducens MI-1|Rep:
Metallophosphoesterase - Desulfotomaculum reducens MI-1
Length = 453
Score = 31.9 bits (69), Expect(2) = 2.7
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +3
Query: 210 LRILIASDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV 380
L+ + SDIHLG + ED A ++ +A++ VD +L+ GDL+D PS+
Sbjct: 4 LKFIHCSDIHLGRQRLGGKLPDEDFARALGYIVQVALEQRVDGLLVAGDLYD--SPSI 59
Score = 21.8 bits (44), Expect(2) = 2.7
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +3
Query: 480 RTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSS-LDILSITGLVN 614
+ +N P + PI I GNHD G + + L+ GLV+
Sbjct: 66 QAINCLMPLQEANIPIFIIEGNHDRATVTGETHTWVRYLNDIGLVH 111
>UniRef50_UPI00015C5C4B Cluster: hypothetical protein CKO_02773;
n=1; Citrobacter koseri ATCC BAA-895|Rep: hypothetical
protein CKO_02773 - Citrobacter koseri ATCC BAA-895
Length = 449
Score = 34.7 bits (76), Expect = 3.0
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 374
+RIL SD HLG R + + +L A VD I++ GD+FD P
Sbjct: 48 MRILHTSDWHLGQNFYSKSRAAEHLAFLDWLLETAQSHQVDAIIVAGDIFDTGSP 102
>UniRef50_Q9RT45 Cluster: Exonuclease SbcD, putative; n=2;
Deinococcus|Rep: Exonuclease SbcD, putative -
Deinococcus radiodurans
Length = 416
Score = 34.7 bits (76), Expect = 3.0
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 383
+R+L +D H G + R + A E+ LA D +L+ GDLFD PS +
Sbjct: 24 MRVLHTADFHAGRLLKGFDRTPEIHDALVEIAGLARTERADAVLVSGDLFDTGNPSAD 81
>UniRef50_Q8EP66 Cluster: Exonuclease; n=13; Bacillaceae|Rep:
Exonuclease - Oceanobacillus iheyensis
Length = 388
Score = 34.7 bits (76), Expect = 3.0
Identities = 18/73 (24%), Positives = 36/73 (49%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 389
++I +D HLG + ED + ++ + D++++ GDL+D+A P V+ +
Sbjct: 1 MKIFHTADWHLGKLVQGIYMTEDQNYILNQFVAEVEREQPDVVIIAGDLYDRAVPPVDAV 60
Query: 390 FKCTEIIRKYCLG 428
+I+ K G
Sbjct: 61 HLLDQILDKIIHG 73
>UniRef50_Q7UKG1 Cluster: Probable phosphoesterase yhaO-putative DNA
repair exonuclease; n=1; Pirellula sp.|Rep: Probable
phosphoesterase yhaO-putative DNA repair exonuclease -
Rhodopirellula baltica
Length = 431
Score = 34.7 bits (76), Expect = 3.0
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 9/66 (13%)
Frame = +3
Query: 213 RILIASDIHLGF-------MENDPVRG--EDSFIAFEEVLSLAVQCDVDLILLGGDLFDQ 365
RIL A+DIHL E+ PV E S A E + LA++ VDL+++ GDL+D
Sbjct: 5 RILHAADIHLDSPLQKLDAYEDAPVDEIREASRRALENMTDLAIEEQVDLVVIAGDLYDG 64
Query: 366 AKPSVN 383
P N
Sbjct: 65 DWPDQN 70
>UniRef50_Q5P494 Cluster: Exonuclease SbcD; n=1; Azoarcus sp.
EbN1|Rep: Exonuclease SbcD - Azoarcus sp. (strain EbN1)
(Aromatoleum aromaticum (strain EbN1))
Length = 426
Score = 34.7 bits (76), Expect = 3.0
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPS 377
+R+L SD HLG +D R + + +L+L D++L+ GD+FD A PS
Sbjct: 1 MRLLHTSDWHLGQSLHDFDRTYEHQQFLDWLLALIATERPDVLLIAGDVFDNANPS 56
>UniRef50_Q38Y02 Cluster: Putative metallo-phosphoesterase; n=1;
Lactobacillus sakei subsp. sakei 23K|Rep: Putative
metallo-phosphoesterase - Lactobacillus sakei subsp.
sakei (strain 23K)
Length = 397
Score = 34.7 bits (76), Expect = 3.0
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +3
Query: 273 EDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV 380
E +F AFE+++ A+ VD +LL GD FDQ S+
Sbjct: 31 ESTFTAFEKLVQTAIDEAVDFVLLVGDSFDQEAQSL 66
>UniRef50_A5WEF9 Cluster: Nuclease SbcCD, D subunit; n=3;
Psychrobacter|Rep: Nuclease SbcCD, D subunit -
Psychrobacter sp. PRwf-1
Length = 537
Score = 34.7 bits (76), Expect = 3.0
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +3
Query: 171 IENDISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQ-CDVDLILLG 347
+ N S P L IL SD HLG +R + F AF L+ +Q VD++++
Sbjct: 1 MSNSTSLSHPPKPLTILHTSDWHLGRRLYGQLRYHE-FEAFLAWLTQTLQQYQVDVLIVA 59
Query: 348 GDLFDQAKPS 377
GD+FD PS
Sbjct: 60 GDVFDTMTPS 69
>UniRef50_Q4XVJ3 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 283
Score = 34.7 bits (76), Expect = 3.0
Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Frame = +3
Query: 183 ISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFD 362
I++ + ++ +I+ D HL + N+ + F+A E+ + I+ +
Sbjct: 91 INSKNKEEKKKIITFDDEHLNYRLNN-----NKFLA--ELKDKISDMPNEYIISNEETLH 143
Query: 363 QAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHG 542
V+ II KY +K S E LS+++ NF ++ +NIS I +
Sbjct: 144 IGTKKVDSYLNKISIIDKYIDKNKAYSQEELSNELNNFFNNFYLQNFQINISQDIFKAND 203
Query: 543 NHDDPV-GQGSVSS 581
N + P+ G+V+S
Sbjct: 204 NENQPIHDDGTVTS 217
>UniRef50_Q65LT8 Cluster: YhaO; n=4; Bacillus|Rep: YhaO - Bacillus
licheniformis (strain DSM 13 / ATCC 14580)
Length = 414
Score = 34.3 bits (75), Expect = 4.0
Identities = 22/58 (37%), Positives = 31/58 (53%)
Frame = +3
Query: 279 SFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIEL 452
+F + E V LA+ D ILL GDLFD+A S+ K +RK L K +I++
Sbjct: 42 TFKSAENVFKLAIDEQADFILLAGDLFDEANRSL----KAQMFLRKQFLKLKENNIQV 95
>UniRef50_Q2IN32 Cluster: Nuclease SbcCD, D subunit; n=2;
Myxococcaceae|Rep: Nuclease SbcCD, D subunit -
Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 428
Score = 34.3 bits (75), Expect = 4.0
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRG--EDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 374
LRIL +D HLG + RG + F+A+ +L A VD +++ GD+FD A P
Sbjct: 14 LRILHTADWHLGHALHGVDRGPEHERFVAW--LLDTAEAEAVDAVIVAGDVFDAANP 68
>UniRef50_Q1NCL0 Cluster: Nuclease SbcCD, D subunit; n=1;
Sphingomonas sp. SKA58|Rep: Nuclease SbcCD, D subunit -
Sphingomonas sp. SKA58
Length = 410
Score = 34.3 bits (75), Expect = 4.0
Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Frame = +3
Query: 213 RILIASDIHLG--FMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNC 386
R++ +SD H+G ++ ++F+++ +L V + DL+L+ GD++D A P V+
Sbjct: 9 RLIHSSDWHIGHELFSHEREAEHEAFLSW--LLDRLVAEEADLLLVTGDIYDVANPPVSA 66
Query: 387 MFKCTEIIR 413
M + +R
Sbjct: 67 MARLYAFLR 75
>UniRef50_A3WLK0 Cluster: Exonuclease SbcD, putative; n=1;
Idiomarina baltica OS145|Rep: Exonuclease SbcD, putative
- Idiomarina baltica OS145
Length = 382
Score = 34.3 bits (75), Expect = 4.0
Identities = 15/55 (27%), Positives = 31/55 (56%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 374
++IL SD HLG + + E ++++ + Q VD +++ GD++D++ P
Sbjct: 1 MKILHTSDWHLGRLFHQQSLLEQQIELLQQIVEIIDQQAVDAVIIAGDIYDRSVP 55
>UniRef50_Q54NN5 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 366
Score = 34.3 bits (75), Expect = 4.0
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 6/113 (5%)
Frame = +3
Query: 207 TLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNC 386
+ +I+ SDIH + P+R DSF+ ++V++ + DLIL+ GDL ++ +
Sbjct: 67 SFKIVQLSDIHYDKL---PLRISDSFL--QKVINSTNALNPDLILITGDLVERDPEPITQ 121
Query: 387 MFK--CTEIIRKY----CLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPI 527
++K +++ KY LG+ L + IKN + N +I YP+
Sbjct: 122 LYKKHLSQLKSKYGIYAILGNHDYKTTLGPEIIKNALKNTNITLLENDIVYPM 174
>UniRef50_Q22P75 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 430
Score = 34.3 bits (75), Expect = 4.0
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +3
Query: 393 KCTEIIR-KYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQG 569
KC ++ + L + + +E L + K+ + N E NL+ISY S+H H +G
Sbjct: 76 KCQNLVDLELILRNTEIKLENLKNIYKDLEKLTNIEKLNLDISYNTFSLHAEHKYMMGID 135
Query: 570 SVSSLDILSIT 602
++L S++
Sbjct: 136 KCTNLVSFSLS 146
>UniRef50_A2F419 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 425
Score = 34.3 bits (75), Expect = 4.0
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 13/97 (13%)
Frame = +3
Query: 351 DLFDQAKPSVNCMFKCTEIIRKYCLGDKPVS--IELLS----DQ-IKNFSRTVNYEDP-- 503
D+FD K ++ CTE+ K+ GDK ++ +ELL+ DQ IK F+ V + D
Sbjct: 223 DVFDALKEIISN--NCTELFEKFIFGDKFLNFLLELLNSDKKDQAIKMFATMVYFGDSTI 280
Query: 504 ----NLNISYPILSIHGNHDDPVGQGSVSSLDILSIT 602
NL+I IL + + ++ V + S D LSI+
Sbjct: 281 EIFNNLHIIEKILELTNDENESVQFNAFSFFDALSIS 317
>UniRef50_A6CK39 Cluster: Exonuclease; n=3; Bacillaceae|Rep:
Exonuclease - Bacillus sp. SG-1
Length = 381
Score = 29.1 bits (62), Expect(2) = 4.6
Identities = 15/69 (21%), Positives = 33/69 (47%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 389
++ + +D HLG + + E + ++L + D +++ GDL+D++ P +
Sbjct: 1 MKFIHTADWHLGKLVHGIYMTEQQREVLYQFVNLVEEEKPDAVVIAGDLYDRSVPPTEAV 60
Query: 390 FKCTEIIRK 416
EI+ K
Sbjct: 61 ELLDEILYK 69
Score = 23.8 bits (49), Expect(2) = 4.6
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +3
Query: 504 NLNISYPILSIHGNHD 551
N+ + P+++I GNHD
Sbjct: 71 NVELETPVIAISGNHD 86
>UniRef50_Q03QD8 Cluster: DNA repair exonuclease; n=1; Lactobacillus
brevis ATCC 367|Rep: DNA repair exonuclease -
Lactobacillus brevis (strain ATCC 367 / JCM 1170)
Length = 404
Score = 33.9 bits (74), Expect = 5.3
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +3
Query: 273 EDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCMFKCTEIIRKYCLGDKPVSI 446
+ +F A +V A+ VD ++L GDLFD+++ SV E + L + PV +
Sbjct: 31 QSTFAAVTKVFDRAISEHVDFVVLAGDLFDRSEQSVAAQAYLFEQFDRLRLANIPVFV 88
>UniRef50_A6WB40 Cluster: Metallophosphoesterase; n=1; Kineococcus
radiotolerans SRS30216|Rep: Metallophosphoesterase -
Kineococcus radiotolerans SRS30216
Length = 515
Score = 33.9 bits (74), Expect = 5.3
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Frame = +3
Query: 228 SDIHLGFME---NDPVRG-----EDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 383
+D HLG+ + P G D ++++ V+ + +VDL++ GGD F Q+ PS+
Sbjct: 12 ADAHLGYAARCGSHPASGLNHRVRDGYLSYRAVVRDMIAKEVDLVIDGGDTFHQSHPSIG 71
Query: 384 CM 389
+
Sbjct: 72 AI 73
>UniRef50_A5IU09 Cluster: Metallophosphoesterase; n=16;
Staphylococcus|Rep: Metallophosphoesterase -
Staphylococcus aureus subsp. aureus JH9
Length = 398
Score = 33.9 bits (74), Expect = 5.3
Identities = 11/30 (36%), Positives = 23/30 (76%)
Frame = +3
Query: 273 EDSFIAFEEVLSLAVQCDVDLILLGGDLFD 362
+ ++ +F+ ++ +A+Q DVD +++ GDLFD
Sbjct: 32 KSAYESFKNIVDIALQQDVDFVIIAGDLFD 61
>UniRef50_A1SK69 Cluster: Nuclease SbcCD, D subunit; n=2;
Actinomycetales|Rep: Nuclease SbcCD, D subunit -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 386
Score = 33.9 bits (74), Expect = 5.3
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +3
Query: 210 LRILIASDIHLG--FMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVN 383
+RIL SD HLG F + + +++ + +L + + VDL+++ GD++D+A P V+
Sbjct: 1 MRILHTSDWHLGRSFHREGMLGHQAAYV--DHLLEVVERERVDLVVVAGDVYDRALPHVD 58
Query: 384 CMFKCTEIIRK 416
+ E + +
Sbjct: 59 AVRLADETLAR 69
>UniRef50_A1K1W1 Cluster: Exonuclease SbcD, putative; n=4;
Betaproteobacteria|Rep: Exonuclease SbcD, putative -
Azoarcus sp. (strain BH72)
Length = 381
Score = 33.9 bits (74), Expect = 5.3
Identities = 19/73 (26%), Positives = 36/73 (49%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 389
+R L +D HLG + + ED + + LA + D IL+ GD++D++ P + +
Sbjct: 1 MRFLHTADWHLGRVYHGVSLLEDQAHVLRDFVRLAGETRPDAILIAGDVYDRSVPPADAV 60
Query: 390 FKCTEIIRKYCLG 428
E + + +G
Sbjct: 61 RLLDETLTELVVG 73
>UniRef50_Q552H6 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum AX4
Length = 468
Score = 33.9 bits (74), Expect = 5.3
Identities = 24/119 (20%), Positives = 56/119 (47%)
Frame = +3
Query: 162 KIMIENDISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLIL 341
K ++ N + + +I+L M + R +++ +F++ +L + ++ +
Sbjct: 208 KAIVANSFIKFKSKHLQQFAFRKNINLYIMPKEMSRHKENTTSFKKPKNLLLW-RIEWLF 266
Query: 342 LGGDLFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNIS 518
L D F + PS+ ++++K+ D PV+I L + +K + +Y +PN N +
Sbjct: 267 LDDD-FKWSDPSIQDSMIMNDLLQKHI--DDPVNIYNLKNNLKKLNSNRDYRNPNENFT 322
>UniRef50_Q3IPC0 Cluster: Putative uncharacterized protein; n=1;
Natronomonas pharaonis DSM 2160|Rep: Putative
uncharacterized protein - Natronomonas pharaonis (strain
DSM 2160 / ATCC 35678)
Length = 441
Score = 33.9 bits (74), Expect = 5.3
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 9/67 (13%)
Frame = +3
Query: 207 TLRILIASDIHLGFM-------ENDPVRGEDSFI--AFEEVLSLAVQCDVDLILLGGDLF 359
T+R L +D+HLG + DS I A E + A++ DVD +++ GDL+
Sbjct: 2 TVRFLHTADLHLGSQLKTQHRQATGTIETLDSAIYTAVERLFDTAIEEDVDFVVIAGDLY 61
Query: 360 DQAKPSV 380
D+ SV
Sbjct: 62 DEDSRSV 68
>UniRef50_Q74CF0 Cluster: Nuclease SbcCD, D subunit, putative; n=6;
Bacteria|Rep: Nuclease SbcCD, D subunit, putative -
Geobacter sulfurreducens
Length = 418
Score = 33.5 bits (73), Expect = 7.0
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +3
Query: 468 KNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVN 614
+ F+RT+ P N P +++ GNHD + S+S ++ LS G ++
Sbjct: 65 RTFARTIETLQPLKNAGIPCIAVEGNHDWIHRRDSISWMEALSQMGYIH 113
>UniRef50_Q1VZW8 Cluster: Exonuclease SbcD; n=1; Psychroflexus
torquis ATCC 700755|Rep: Exonuclease SbcD -
Psychroflexus torquis ATCC 700755
Length = 403
Score = 33.5 bits (73), Expect = 7.0
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPS 377
+RIL +D H+G + +D + + + + D+D++L+ GD+FD + PS
Sbjct: 1 MRILHTADWHIGKKLHKKELYQDFDLFIDWMCQFLPENDIDILLVSGDVFDFSNPS 56
>UniRef50_A7DFW6 Cluster: Nuclease SbcCD, D subunit; n=3;
Alphaproteobacteria|Rep: Nuclease SbcCD, D subunit -
Methylobacterium extorquens PA1
Length = 415
Score = 33.5 bits (73), Expect = 7.0
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPS 377
+R+L D H+G R + F + S+ V+ +VD +++ GD+FD PS
Sbjct: 2 IRVLHTGDWHIGQTLRGFSREREHDAVFGCLESIVVEREVDALVVAGDVFDSQNPS 57
>UniRef50_A3YYZ0 Cluster: Putative exonuclease; n=1; Synechococcus
sp. WH 5701|Rep: Putative exonuclease - Synechococcus
sp. WH 5701
Length = 396
Score = 33.5 bits (73), Expect = 7.0
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKP 374
+R+L SD HLG + ++ +++LA VD +L+ GDL+D+A P
Sbjct: 1 MRLLHTSDWHLGRSFHGASLLQEQAEVLARIVALARDGVVDAVLIAGDLYDRAIP 55
>UniRef50_A3I3N6 Cluster: Putative uncharacterized protein; n=1;
Bacillus sp. B14905|Rep: Putative uncharacterized
protein - Bacillus sp. B14905
Length = 404
Score = 33.5 bits (73), Expect = 7.0
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +3
Query: 279 SFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCMFKCTEIIRKYCLGDKPVSI 446
+F AF++++ A+Q D +L+ GD++D S+ K E + K + PV I
Sbjct: 36 TFDAFDKIIQKAIQEQPDFLLIVGDIYDGENRSLQAQRKFQEAMEKLFQHNIPVII 91
>UniRef50_Q23MC1 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1306
Score = 33.5 bits (73), Expect = 7.0
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +3
Query: 351 DLFDQAKPSVNCMFKCTEIIRKY-CLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPI 527
DL D KP N + K I + C D+P SI + S+ KN + ++ + N+ PI
Sbjct: 781 DLIDLKKPKQNNISKNRSISSELECHFDEPNSINIFSNNSKNQLHATSQKNFSSNLIPPI 840
Query: 528 LSIHGN 545
++ H N
Sbjct: 841 INSHEN 846
>UniRef50_A0BB93 Cluster: Chromosome undetermined scaffold_1, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_1,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 110
Score = 33.5 bits (73), Expect = 7.0
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Frame = +3
Query: 321 CDVDLILLGGDLFDQAKPSVNCMFKCTEIIRKYCLGDKPVS----IELLSDQIKNFSRTV 488
CD+ L + ++ DQ++ + KC I KYC+ +S I+LL D F+
Sbjct: 12 CDISLSQIE-NMLDQSE--IEPQTKCKNIETKYCINSTVISISNQIKLLGDDFSEFNVPS 68
Query: 489 NYEDPNLNI 515
+Y PN+ +
Sbjct: 69 HYLPPNIQV 77
>UniRef50_Q2K465 Cluster: Putative sensory box/GGDEF family protein;
n=2; Rhizobium|Rep: Putative sensory box/GGDEF family
protein - Rhizobium etli (strain CFN 42 / ATCC 51251)
Length = 839
Score = 33.1 bits (72), Expect = 9.2
Identities = 22/75 (29%), Positives = 34/75 (45%)
Frame = -1
Query: 466 IWSDSNSILTGLSPRQYLRIISVHLNIQLTEGLA*SNRSPPKSIKSTSHCTARDKTSSKA 287
+W D+N + PR+ L L+ S + P +++ + C R K+ K
Sbjct: 5 LWPDANGLKRFQQPRRGLIFQRSREKAALSRE---SCAAQPVVLENLTKCLIRLKSIFKG 61
Query: 286 IKLSSPRTGSFSMKP 242
+ L SPRTG MKP
Sbjct: 62 LGLESPRTGKVWMKP 76
>UniRef50_A5VL00 Cluster: Metallophosphoesterase; n=2; Lactobacillus
reuteri|Rep: Metallophosphoesterase - Lactobacillus
reuteri F275
Length = 394
Score = 33.1 bits (72), Expect = 9.2
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = +3
Query: 279 SFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSV 380
+F AF++++ A+ VD IL+ GD++D+ + S+
Sbjct: 33 TFTAFQKIVDDAIALKVDFILISGDIYDRDQQSI 66
>UniRef50_A5KQM8 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus torques ATCC 27756|Rep: Putative
uncharacterized protein - Ruminococcus torques ATCC
27756
Length = 386
Score = 33.1 bits (72), Expect = 9.2
Identities = 18/83 (21%), Positives = 39/83 (46%)
Frame = +3
Query: 210 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQAKPSVNCM 389
++ + SD+H+G ED EEV+ + D +++ GD++D++ PS +
Sbjct: 1 MKFIHLSDLHIGKHLYHYNMKEDQEHILEEVIGYTEKLRPDAVVIAGDIYDKSVPSAEAV 60
Query: 390 FKCTEIIRKYCLGDKPVSIELLS 458
+ + + VSI +++
Sbjct: 61 AVFDDFLTRLSSVSPQVSILIIA 83
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 717,038,035
Number of Sequences: 1657284
Number of extensions: 13275110
Number of successful extensions: 30542
Number of sequences better than 10.0: 146
Number of HSP's better than 10.0 without gapping: 29516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30464
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75833093035
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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