Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_L07
         (859 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z22930-7|CAA80512.1|  274|Anopheles gambiae trypsin protein.           26   1.7  
Z18889-1|CAA79327.1|  274|Anopheles gambiae trypsin protein.           25   3.9  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   5.1  

>Z22930-7|CAA80512.1|  274|Anopheles gambiae trypsin protein.
          Length = 274

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -1

Query: 343 KSIKSTSHCTARDKTSSKAIKLSSPRTGS 257
           K + + +HCTA   TSS  ++L + R  S
Sbjct: 81  KWVLTAAHCTAGASTSSLTVRLGTSRHAS 109


>Z18889-1|CAA79327.1|  274|Anopheles gambiae trypsin protein.
          Length = 274

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -1

Query: 343 KSIKSTSHCTARDKTSSKAIKLSSPRTGS 257
           K + + +HCTA   TSS  + L + R  S
Sbjct: 81  KWVLTAAHCTAGRSTSSLTVPLGTSRHAS 109


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 469 FIWSDSNSILTGLSPRQY 416
           F W+D N   T L+PR Y
Sbjct: 4   FHWTDGNIHTTALTPRDY 21


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 760,145
Number of Sequences: 2352
Number of extensions: 14059
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91372671
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)