Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_L05
         (939 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF137396-7|AAG41681.1|  326|Homo sapiens HOR5'Beta7 protein.           31   6.0  
BC142728-1|AAI42729.1|  417|Homo sapiens SAMD14 protein protein.       31   8.0  
BC141822-1|AAI41823.1|  417|Homo sapiens SAMD14 protein protein.       31   8.0  
BC047081-1|AAH47081.1|  427|Homo sapiens SAMD14 protein protein.       31   8.0  
BC029872-1|AAH29872.1|  247|Homo sapiens SAMD14 protein protein.       31   8.0  

>AF137396-7|AAG41681.1|  326|Homo sapiens HOR5'Beta7 protein.
          Length = 326

 Score = 31.1 bits (67), Expect = 6.0
 Identities = 15/27 (55%), Positives = 17/27 (62%)
 Frame = +2

Query: 302 RSPVPTLPLTGYLSAFLPSGSVALSHS 382
           R PV T+P+   L AF   GSV LSHS
Sbjct: 163 RGPVATIPIVLLLKAFPYCGSVVLSHS 189


>BC142728-1|AAI42729.1|  417|Homo sapiens SAMD14 protein protein.
          Length = 417

 Score = 30.7 bits (66), Expect = 8.0
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3

Query: 198 PPXRASQKSTLKSEVAKPDRTIKIPGVSPWKLPRCA 305
           P   ASQ+STL  +   P  + KIP   PW+  +C+
Sbjct: 268 PKKSASQESTLSDDSTPPSSSPKIPS-GPWQEAKCS 302


>BC141822-1|AAI41823.1|  417|Homo sapiens SAMD14 protein protein.
          Length = 417

 Score = 30.7 bits (66), Expect = 8.0
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3

Query: 198 PPXRASQKSTLKSEVAKPDRTIKIPGVSPWKLPRCA 305
           P   ASQ+STL  +   P  + KIP   PW+  +C+
Sbjct: 268 PKKSASQESTLSDDSTPPSSSPKIPS-GPWQEAKCS 302


>BC047081-1|AAH47081.1|  427|Homo sapiens SAMD14 protein protein.
          Length = 427

 Score = 30.7 bits (66), Expect = 8.0
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3

Query: 198 PPXRASQKSTLKSEVAKPDRTIKIPGVSPWKLPRCA 305
           P   ASQ+STL  +   P  + KIP   PW+  +C+
Sbjct: 278 PKKSASQESTLSDDSTPPSSSPKIPS-GPWQEAKCS 312


>BC029872-1|AAH29872.1|  247|Homo sapiens SAMD14 protein protein.
          Length = 247

 Score = 30.7 bits (66), Expect = 8.0
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3

Query: 198 PPXRASQKSTLKSEVAKPDRTIKIPGVSPWKLPRCA 305
           P   ASQ+STL  +   P  + KIP   PW+  +C+
Sbjct: 98  PKKSASQESTLSDDSTPPSSSPKIPS-GPWQEAKCS 132


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,171,047
Number of Sequences: 237096
Number of extensions: 2617977
Number of successful extensions: 10291
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10277
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12325533684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)