Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_L03
         (912 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            29   0.26 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   1.0  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   9.7  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 28.7 bits (61), Expect = 0.26
 Identities = 13/38 (34%), Positives = 13/38 (34%)
 Frame = -1

Query: 828 PXRGXXPXPPPPXTXGXXXFXGXGXGXGAPKXQNPPFP 715
           P     P PPPP   G       G   G P    PP P
Sbjct: 577 PNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLP 614


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 26.6 bits (56), Expect = 1.0
 Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
 Frame = +1

Query: 787 GXGGGGXGXXXP--XGGXXGFPXXXGGXPG 870
           G GGGG G   P   GG  G P   GG  G
Sbjct: 201 GAGGGGSGGGAPGGGGGSSGGPGPGGGGGG 230


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 9.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 295  FFIRDTNAFTMAAIDLYHL 239
            ++IRD N F +  ID+ +L
Sbjct: 2575 YYIRDANGFVLMDIDMAYL 2593


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 594,269
Number of Sequences: 2352
Number of extensions: 8919
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 98814789
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)