Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_L02
         (895 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    26   0.35 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    25   1.1  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    25   1.1  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   4.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.9  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 26.2 bits (55), Expect = 0.35
 Identities = 14/46 (30%), Positives = 19/46 (41%)
 Frame = -2

Query: 393  GMNVPSRSFKVATSFTLPFSLASFSSAILVLYCSSVRSPVSRFCLP 256
            G   PS+   V+ S ++P  +ASF       Y   V  P     LP
Sbjct: 1289 GEGQPSKKVTVSPSASVPAKIASFDDTFTTTYKEDVTLPCLAVGLP 1334


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 11/37 (29%), Positives = 23/37 (62%)
 Frame = +1

Query: 91  RKSKILDIFLIFVLEIFSKIKQNEDNLVHIVLLRVQE 201
           R+ K +D+F+IF L    K++  +++ V   + ++QE
Sbjct: 223 RQIKSVDLFVIFPLTKAEKVRNLKEDEVTFSVQKIQE 259


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 11/37 (29%), Positives = 23/37 (62%)
 Frame = +1

Query: 91  RKSKILDIFLIFVLEIFSKIKQNEDNLVHIVLLRVQE 201
           R+ K +D+F+IF L    K++  +++ V   + ++QE
Sbjct: 179 RQIKSVDLFVIFPLTKAEKVRNLKEDEVTFSVQKIQE 215


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 198 LNTKKHNMNQIIFILFDFTKDFQ 130
           L +    MNQ ++   DF ++FQ
Sbjct: 609 LTSNVFRMNQFVYDAIDFLREFQ 631


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = -3

Query: 674  RGRKTPSPGXPVKSCRPXPPDRXDGMYST 588
            +G  + S G P+K     PP    G  ST
Sbjct: 1095 QGSSSSSEGVPLKGTAVPPPSGSSGPGST 1123


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,200
Number of Sequences: 336
Number of extensions: 3149
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24823920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)