Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_L02
(895 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomy... 84 2e-17
SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism... 81 2e-16
SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyc... 69 7e-13
SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyc... 55 1e-08
SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde reduc... 54 2e-08
SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual 31 0.29
SPCC965.06 |||potassium channel subunit |Schizosaccharomyces pom... 30 0.51
SPAC1565.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 0.67
SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pomb... 28 1.6
SPBC20F10.10 |||cyclin pho85 family|Schizosaccharomyces pombe|ch... 28 2.1
SPBP22H7.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 2.7
SPAC186.01 |||DIPSY family|Schizosaccharomyces pombe|chr 1|||Manual 27 4.8
SPAC3C7.06c |pit1||serine/threonine protein kinase Pit1|Schizosa... 26 8.3
SPAC16A10.05c |dad1||DASH complex subunit Dad1|Schizosaccharomyc... 26 8.3
>SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 321
Score = 84.2 bits (199), Expect = 2e-17
Identities = 47/118 (39%), Positives = 62/118 (52%)
Frame = +2
Query: 371 LRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDG 550
L DG+ +P + LGT P T V+TA+ GYR ID A IYGNE +G IK +
Sbjct: 18 LADGSKIPGLGLGTWRSEPNQTKNAVKTALQYGYRHIDAAAIYGNEDEVGDGIK----ES 73
Query: 551 XVRRDELSLMGKLWSTFHXXDLVXTACRISLADLGLEFFDLFLIHNPXSLKEGXXSXP 724
V R ++ + KLW H + V A +L DL L++ D +LIH P S K G P
Sbjct: 74 GVPRKDIWVTSKLWCNAHAPEAVPKALEKTLKDLKLDYLDEYLIHWPVSFKTGEDKFP 131
>SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 81.0 bits (191), Expect = 2e-16
Identities = 49/122 (40%), Positives = 63/122 (51%)
Frame = +2
Query: 359 ATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNK 538
A L +G +P I LGT T V A+ GYR IDTA+IYGNEK IG+ I+
Sbjct: 13 AYFTLPNGDKIPSIGLGTWRSGKDETKNAVCAALKAGYRHIDTAHIYGNEKEIGEGIR-- 70
Query: 539 IDDGXVRRDELSLMGKLWSTFHXXDLVXTACRISLADLGLEFFDLFLIHNPXSLKEGXXS 718
+ V R ++ + KLW H LV A +L DL LE+ D +LIH P +L G
Sbjct: 71 --ESGVPRTDIWVTSKLWCNAHRAGLVPLALEKTLQDLNLEYIDAYLIHWPFALLSGPEE 128
Query: 719 XP 724
P
Sbjct: 129 LP 130
>SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 69.3 bits (162), Expect = 7e-13
Identities = 45/121 (37%), Positives = 62/121 (51%)
Frame = +2
Query: 344 SVKEVATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGK 523
S E T+ L +G +P I G +L +V A+D GYR IDTA +YGNE + GK
Sbjct: 4 SQTESTTVTLTNGMVIPRIGFGAFMLKYNECYGLVTQALDSGYRHIDTAAVYGNEDICGK 63
Query: 524 AIKNKIDDGXVRRDELSLMGKLWSTFHXXDLVXTACRISLADLGLEFFDLFLIHNPXSLK 703
AI + + V+R ++ L KL + A R SL LG + DLFLI +P K
Sbjct: 64 AIVDWCEKNNVKRTDIFLTSKLANCSDYYS-TRAAIRSSLHHLG-TYIDLFLIQSPAGGK 121
Query: 704 E 706
+
Sbjct: 122 K 122
>SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 275
Score = 55.2 bits (127), Expect = 1e-08
Identities = 32/109 (29%), Positives = 56/109 (51%)
Frame = +2
Query: 365 LKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKID 544
+KL +G P A G+ ++ + V A+ GYR ID+A +Y NE G+AI ++
Sbjct: 6 VKLNNGLKCPQFAYGSYMVNRTKCFDSVYAALQCGYRHIDSAQMYHNEADCGRAILKFME 65
Query: 545 DGXVRRDELSLMGKLWSTFHXXDLVXTACRISLADLGLEFFDLFLIHNP 691
+ +R+++ KL + ++ S+ GL + DLFL+H+P
Sbjct: 66 ETGTKREDIWFTSKL-NDLSGYKSTLSSIDASVKACGLGYIDLFLLHSP 113
>SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde
reductase AKR3C2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 284
Score = 54.4 bits (125), Expect = 2e-08
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 6/112 (5%)
Frame = +2
Query: 389 MPVIALGTALLPP------RLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDG 550
+P +GTAL R + V+ A+ G+ ID A +YGNE+ +G A+K +
Sbjct: 12 VPAYGVGTALFKKEKGEINRTIVDSVKNALAAGFIHIDCAEVYGNEEEVGVALK----EA 67
Query: 551 XVRRDELSLMGKLWSTFHXXDLVXTACRISLADLGLEFFDLFLIHNPXSLKE 706
V R +L + K+ H D + A SL LG ++ DL+L+H+P E
Sbjct: 68 NVPRSKLFITSKV---MHNVDNIPEALNESLRKLGTDYLDLYLLHSPIPFYE 116
>SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual
Length = 815
Score = 30.7 bits (66), Expect = 0.29
Identities = 18/58 (31%), Positives = 34/58 (58%)
Frame = -2
Query: 333 LASFSSAILVLYCSSVRSPVSRFCLPLSKRRCPLPGDSILTEVIFLNTKKHNMNQIIF 160
++SFS+ + +LY + +S VS +PL + L G S+LT +I++ K+ Q ++
Sbjct: 49 ISSFSTHLNILYFNLSKSMVSFAQVPL-EEYLNLLGHSLLTSIIYVMLKRRFYEQSVY 105
>SPCC965.06 |||potassium channel subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 344
Score = 29.9 bits (64), Expect = 0.51
Identities = 29/98 (29%), Positives = 42/98 (42%), Gaps = 12/98 (12%)
Frame = +2
Query: 434 TTEIVETAIDMGYRAIDTAYIYGN---EKLIGKAIKNKIDDGXVRRDELSLMGKLW---- 592
T ++ A D+G DTA IY N E ++GKAIK D R E + K++
Sbjct: 46 TKNCLKQAWDLGINTFDTAEIYSNGNSETVMGKAIKELGWD----RSEYVITTKVFFGAG 101
Query: 593 -----STFHXXDLVXTACRISLADLGLEFFDLFLIHNP 691
+T + SL LGL + D+ + H P
Sbjct: 102 TKLPNTTGLSRKHIIEGLNASLKRLGLPYVDVIMAHRP 139
>SPAC1565.05 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 773
Score = 29.5 bits (63), Expect = 0.67
Identities = 20/78 (25%), Positives = 37/78 (47%)
Frame = +2
Query: 338 KGSVKEVATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLI 517
K S+K++ G ++ G A++P L +++ A +G R + G +LI
Sbjct: 366 KSSLKKMNQNSQLTGYIAVLLKKGLAIVPYTLPIKML-LADAVGKRTSKIGKLRGTNELI 424
Query: 518 GKAIKNKIDDGXVRRDEL 571
G+ + K +G RD+L
Sbjct: 425 GEGVLTKSKNGPSMRDQL 442
>SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2386
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -2
Query: 390 MNVPSRSFKVAT-SFTLPFSLASFSSAILVLYCSSVRSPVSRFCL 259
MN+ F + T ++TLPF + + + A++V +S V+ CL
Sbjct: 726 MNISEGDFLIRTQAYTLPFLVLTKNKALIVRIAELSQSDVATLCL 770
>SPBC20F10.10 |||cyclin pho85 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 243
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = -2
Query: 345 LPFSLASFSSAILVLYCSSVRSPVSRFCLPLSKRRCPLPGDSILTEVIFLNTKKHNMNQI 166
+P S S + L+ +V S + L + CP D L+ +I+L+ H+ +
Sbjct: 58 IPLSPTSLKNPCLIFSAKNVPSISIQAYLTRILKYCPATNDVFLSVLIYLDRIVHHFHFT 117
Query: 165 IFI 157
+FI
Sbjct: 118 VFI 120
>SPBP22H7.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 255
Score = 27.5 bits (58), Expect = 2.7
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -2
Query: 384 VPSRSFKVATSFTLPFSLASFSSAILV 304
+PS+ F++ T F PF+ FS +++V
Sbjct: 177 LPSQRFEIVTGFLSPFNKLYFSKSLIV 203
>SPAC186.01 |||DIPSY family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 26.6 bits (56), Expect = 4.8
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -2
Query: 462 SIAVSTISVVNRGGSKAVPKAMTGMNVPSRSFKVA--TSFTLPFSLASFSS 316
SI STI+ GS+ +TG N P + +V T+ T +L S SS
Sbjct: 99 SIITSTITTTITSGSQLYTTTITGQNTPVDTVEVVIPTAGTFTTTLTSGSS 149
>SPAC3C7.06c |pit1||serine/threonine protein kinase
Pit1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 650
Score = 25.8 bits (54), Expect = 8.3
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = -2
Query: 351 FTLPFSLASFSSAILVLYCSSVRSPVSRFCLPLSKRRCPLPGDSILTE 208
F+ P++LA S +L + P + CL L R P D++ ++
Sbjct: 301 FSPPWNLAFASMLSQLLKWDPAKRPTAEMCLDLEFCRVSAPADAVASK 348
>SPAC16A10.05c |dad1||DASH complex subunit Dad1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 85
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -2
Query: 150 DFTKDFQNKN*KNIQNLRFSKTRRLLS 70
D T++ QN+ K+ ++ F + RRLL+
Sbjct: 2 DITENIQNEQNKDFDDIDFERRRRLLT 28
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,775,192
Number of Sequences: 5004
Number of extensions: 52212
Number of successful extensions: 190
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 186
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 450492750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -