Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_L01
         (950 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.    108   2e-25
Z22930-3|CAA80515.1|  275|Anopheles gambiae trypsin protein.           24   7.8  

>L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.
          Length = 229

 Score =  108 bits (260), Expect = 2e-25
 Identities = 52/56 (92%), Positives = 53/56 (94%)
 Frame = +1

Query: 154 LXVEPSDTIENVXAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQXESTLHLV 321
           L VEPSDTIENV AKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQ ESTLHLV
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70



 Score =  108 bits (260), Expect = 2e-25
 Identities = 52/56 (92%), Positives = 53/56 (94%)
 Frame = +1

Query: 154 LXVEPSDTIENVXAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQXESTLHLV 321
           L VEPSDTIENV AKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQ ESTLHLV
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146



 Score =  108 bits (260), Expect = 2e-25
 Identities = 52/56 (92%), Positives = 53/56 (94%)
 Frame = +1

Query: 154 LXVEPSDTIENVXAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQXESTLHLV 321
           L VEPSDTIENV AKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQ ESTLHLV
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>Z22930-3|CAA80515.1|  275|Anopheles gambiae trypsin protein.
          Length = 275

 Score = 23.8 bits (49), Expect = 7.8
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -2

Query: 121 KIXILHSPYAVTIPQGKRHI 62
           +I +  +PY V++ + KRHI
Sbjct: 54  EIDVAETPYQVSLQRSKRHI 73


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 673,017
Number of Sequences: 2352
Number of extensions: 12284
Number of successful extensions: 38
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 104189652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)