Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_K23
         (955 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    27   0.84 
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    25   3.4  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    25   3.4  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    25   3.4  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   7.8  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   7.8  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 27.1 bits (57), Expect = 0.84
 Identities = 22/103 (21%), Positives = 49/103 (47%)
 Frame = +3

Query: 420 GDWEIVIARTVTRLDRDTLNED*LQKNSPFNFNHSDVPLSELNDRRDSYVLPILNDKSEG 599
           G W ++  RT   L+ + +++   + NS    + + VP+ +L DR+    + I  +   G
Sbjct: 335 GQWTMLPLRT---LEMELISQGIAEPNSVRVLDKASVPIVKLTDRQTQVKVDISFNMESG 391

Query: 600 IIEKYKCHKTQ*REVGIVSSS*LLITRKFVRRIFYQ*YALGVS 728
            ++  K  K   RE  ++    L++ +  ++R   + +  G+S
Sbjct: 392 -VQSAKLIKGFKREYPVLEKLVLVLKQFLLQRDLNEVFTGGIS 433


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 25.0 bits (52), Expect = 3.4
 Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = -1

Query: 643 TSRYCVLWHLYFSII--PSLLSLRIGST 566
           T  YC+LW  + S++  P L+ +R+  T
Sbjct: 420 TQFYCILWRSWLSVLKDPMLVKVRLLQT 447


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 25.0 bits (52), Expect = 3.4
 Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = -1

Query: 643 TSRYCVLWHLYFSII--PSLLSLRIGST 566
           T  YC+LW  + S++  P L+ +R+  T
Sbjct: 420 TQFYCILWRSWLSVLKDPMLVKVRLLQT 447


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 25.0 bits (52), Expect = 3.4
 Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = -1

Query: 643 TSRYCVLWHLYFSII--PSLLSLRIGST 566
           T  YC+LW  + S++  P L+ +R+  T
Sbjct: 398 TQFYCILWRSWLSVLKDPMLVKVRLLQT 425


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.8 bits (49), Expect = 7.8
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 77  DRFPSLPHTKHRYVASFL*GCS 142
           +RFPS P  + ++  S L GCS
Sbjct: 707 NRFPSRPRRQQQHQPSALAGCS 728


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.8 bits (49), Expect = 7.8
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -2

Query: 579 GSAAHTNHVDRLVH*AAHHYD*N*KGCSSAAN 484
           G+AA T H     H A HH+    +  SSA N
Sbjct: 715 GAAAATGHHHHQHHAAPHHHSLQQQHASSAFN 746


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 699,481
Number of Sequences: 2352
Number of extensions: 14163
Number of successful extensions: 32
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 104603103
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)