Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_K22
(908 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF491813-1|AAM09558.1| 2113|Homo sapiens Down syndrome cell adhe... 38 0.038
AF334384-1|AAL57166.1| 2053|Homo sapiens Down syndrome cell adhe... 38 0.038
AF304305-1|AAN32614.1| 1842|Homo sapiens Down syndrome cell adhe... 38 0.038
AF304304-1|AAN32613.1| 2053|Homo sapiens Down syndrome cell adhe... 38 0.038
AB032958-1|BAA86446.2| 2092|Homo sapiens KIAA1132 protein protein. 38 0.038
AY010111-1|AAG27034.2| 3354|Homo sapiens cadherin 23 protein. 33 1.9
AL772287-2|CAI13626.1| 3359|Homo sapiens cadherin-like 23 protein. 33 1.9
AL731541-6|CAI40841.1| 3359|Homo sapiens cadherin-like 23 protein. 33 1.9
AL359183-3|CAI13426.1| 3359|Homo sapiens cadherin-like 23 protein. 33 1.9
AF312024-1|AAG48303.1| 3354|Homo sapiens cadherin related 23 pro... 33 1.9
BC128586-1|AAI28587.1| 748|Homo sapiens SNX26 protein protein. 31 5.8
AK127255-1|BAC86902.1| 1007|Homo sapiens protein ( Homo sapiens ... 31 5.8
>AF491813-1|AAM09558.1| 2113|Homo sapiens Down syndrome cell adhesion
molecule 2 protein.
Length = 2113
Score = 38.3 bits (85), Expect = 0.038
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 614 PGVSPWKLPRALSCSDPAXYRKPVRLS-PFGKRGASPXXTLXVSXSGVGRSXQXG 775
PG +P + P A S + PA +P R P K G S L +S SGVGRS + G
Sbjct: 2048 PGPTPAEPPTAPSAAPPAPSTEPPRAGGPHTKMGGSRDSLLEMSTSGVGRSQKQG 2102
>AF334384-1|AAL57166.1| 2053|Homo sapiens Down syndrome cell adhesion
molecule DSCAML1 protein.
Length = 2053
Score = 38.3 bits (85), Expect = 0.038
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 614 PGVSPWKLPRALSCSDPAXYRKPVRLS-PFGKRGASPXXTLXVSXSGVGRSXQXG 775
PG +P + P A S + PA +P R P K G S L +S SGVGRS + G
Sbjct: 1988 PGPTPAEPPTAPSAAPPAPSTEPPRAGGPHTKMGGSRDSLLEMSTSGVGRSQKQG 2042
>AF304305-1|AAN32614.1| 1842|Homo sapiens Down syndrome cell adhesion
molecule like-protein 1b protein.
Length = 1842
Score = 38.3 bits (85), Expect = 0.038
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 614 PGVSPWKLPRALSCSDPAXYRKPVRLS-PFGKRGASPXXTLXVSXSGVGRSXQXG 775
PG +P + P A S + PA +P R P K G S L +S SGVGRS + G
Sbjct: 1777 PGPTPAEPPTAPSAAPPAPSTEPPRAGGPHTKMGGSRDSLLEMSTSGVGRSQKQG 1831
>AF304304-1|AAN32613.1| 2053|Homo sapiens Down syndrome cell adhesion
molecule like-protein 1a protein.
Length = 2053
Score = 38.3 bits (85), Expect = 0.038
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 614 PGVSPWKLPRALSCSDPAXYRKPVRLS-PFGKRGASPXXTLXVSXSGVGRSXQXG 775
PG +P + P A S + PA +P R P K G S L +S SGVGRS + G
Sbjct: 1988 PGPTPAEPPTAPSAAPPAPSTEPPRAGGPHTKMGGSRDSLLEMSTSGVGRSQKQG 2042
>AB032958-1|BAA86446.2| 2092|Homo sapiens KIAA1132 protein protein.
Length = 2092
Score = 38.3 bits (85), Expect = 0.038
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 614 PGVSPWKLPRALSCSDPAXYRKPVRLS-PFGKRGASPXXTLXVSXSGVGRSXQXG 775
PG +P + P A S + PA +P R P K G S L +S SGVGRS + G
Sbjct: 2027 PGPTPAEPPTAPSAAPPAPSTEPPRAGGPHTKMGGSRDSLLEMSTSGVGRSQKQG 2081
>AY010111-1|AAG27034.2| 3354|Homo sapiens cadherin 23 protein.
Length = 3354
Score = 32.7 bits (71), Expect = 1.9
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = +3
Query: 489 SKRPGTVKGRVAGVXHRLRPPDEHHKIDAQVKGGETDRTIKYQ--AFP----PGSSLVRS 650
S PGTV + + H L P E+H + K +TDR + Q AF GS +V+S
Sbjct: 2186 SAEPGTVIANITAIDHDLNPKLEYHIVGIVAK-DDTDRLVPNQEDAFAVNINTGSVMVKS 2244
Query: 651 PV 656
P+
Sbjct: 2245 PM 2246
>AL772287-2|CAI13626.1| 3359|Homo sapiens cadherin-like 23 protein.
Length = 3359
Score = 32.7 bits (71), Expect = 1.9
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = +3
Query: 489 SKRPGTVKGRVAGVXHRLRPPDEHHKIDAQVKGGETDRTIKYQ--AFP----PGSSLVRS 650
S PGTV + + H L P E+H + K +TDR + Q AF GS +V+S
Sbjct: 2191 SAEPGTVIANITAIDHDLNPKLEYHIVGIVAK-DDTDRLVPNQEDAFAVNINTGSVMVKS 2249
Query: 651 PV 656
P+
Sbjct: 2250 PM 2251
>AL731541-6|CAI40841.1| 3359|Homo sapiens cadherin-like 23 protein.
Length = 3359
Score = 32.7 bits (71), Expect = 1.9
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = +3
Query: 489 SKRPGTVKGRVAGVXHRLRPPDEHHKIDAQVKGGETDRTIKYQ--AFP----PGSSLVRS 650
S PGTV + + H L P E+H + K +TDR + Q AF GS +V+S
Sbjct: 2191 SAEPGTVIANITAIDHDLNPKLEYHIVGIVAK-DDTDRLVPNQEDAFAVNINTGSVMVKS 2249
Query: 651 PV 656
P+
Sbjct: 2250 PM 2251
>AL359183-3|CAI13426.1| 3359|Homo sapiens cadherin-like 23 protein.
Length = 3359
Score = 32.7 bits (71), Expect = 1.9
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = +3
Query: 489 SKRPGTVKGRVAGVXHRLRPPDEHHKIDAQVKGGETDRTIKYQ--AFP----PGSSLVRS 650
S PGTV + + H L P E+H + K +TDR + Q AF GS +V+S
Sbjct: 2191 SAEPGTVIANITAIDHDLNPKLEYHIVGIVAK-DDTDRLVPNQEDAFAVNINTGSVMVKS 2249
Query: 651 PV 656
P+
Sbjct: 2250 PM 2251
>AF312024-1|AAG48303.1| 3354|Homo sapiens cadherin related 23 protein.
Length = 3354
Score = 32.7 bits (71), Expect = 1.9
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = +3
Query: 489 SKRPGTVKGRVAGVXHRLRPPDEHHKIDAQVKGGETDRTIKYQ--AFP----PGSSLVRS 650
S PGTV + + H L P E+H + K +TDR + Q AF GS +V+S
Sbjct: 2186 SAEPGTVIANITAIDHDLNPKLEYHIVGIVAK-DDTDRLVPNQEDAFAVNINTGSVMVKS 2244
Query: 651 PV 656
P+
Sbjct: 2245 PM 2246
>BC128586-1|AAI28587.1| 748|Homo sapiens SNX26 protein protein.
Length = 748
Score = 31.1 bits (67), Expect = 5.8
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = -2
Query: 718 GSATLPEGRKADRFPVXGRVGT-GERTRELPGGNAW-YFIVLSVSPPLT*ASIL*CSSGG 545
G+ T P KA P R G GE+ R+ PGG++W F L P + L G
Sbjct: 557 GTPTEPTTPKAPASPAERRKGERGEKQRK-PGGSSWKTFFALGRGPSVPRKKPLPWLGGT 615
Query: 544 RSLXKTPATRPFTV 503
R+ + +RP TV
Sbjct: 616 RAPPQPSGSRPDTV 629
>AK127255-1|BAC86902.1| 1007|Homo sapiens protein ( Homo sapiens
cDNA FLJ45322 fis, clone BRHIP3006294, moderately
similar to Mus musculus Cdc42 GTPase-activating protein
(Cdgap). ).
Length = 1007
Score = 31.1 bits (67), Expect = 5.8
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = -2
Query: 718 GSATLPEGRKADRFPVXGRVGT-GERTRELPGGNAW-YFIVLSVSPPLT*ASIL*CSSGG 545
G+ T P KA P R G GE+ R+ PGG++W F L P + L G
Sbjct: 421 GTPTEPTTPKAPASPAERRKGERGEKQRK-PGGSSWKTFFALGRGPSVPRKKPLPWLGGT 479
Query: 544 RSLXKTPATRPFTV 503
R+ + +RP TV
Sbjct: 480 RAPPQPSGSRPDTV 493
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,759,036
Number of Sequences: 237096
Number of extensions: 2341396
Number of successful extensions: 10184
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 9889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10184
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11770329464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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