Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_K20
         (822 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0554 - 9426195-9426674,9427163-9427252,9428143-9428934           30   2.6  
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    29   4.5  
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076           29   4.5  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   5.9  
01_03_0005 + 11568545-11569119,11569179-11569191                       28   7.8  

>03_02_0554 - 9426195-9426674,9427163-9427252,9428143-9428934
          Length = 453

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = +1

Query: 499 KKKPG-GXPXPXXKKKXPPGGXXGXGGG 579
           K+ PG G P P  K   P GG  G GGG
Sbjct: 129 KETPGSGAPAPTRKPPLPAGGGGGGGGG 156


>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 16/68 (23%), Positives = 21/68 (30%)
 Frame = +1

Query: 439 PXQKKXPPXXPXXFFXXGGXKKKPGGXPXPXXKKKXPPGGXXGXGGGKKXPXPXXXXXPX 618
           P     PP  P   F  G  +++    P     +  PP    G    +  P P     P 
Sbjct: 58  PPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPP 117

Query: 619 KKXXXPPP 642
                PPP
Sbjct: 118 PSAPPPPP 125


>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
          Length = 906

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 25/98 (25%), Positives = 25/98 (25%)
 Frame = +1

Query: 526 PXXKKKXPPGGXXGXGGGKKXPXPXXXXXPXKKXXXPPPXCXXXXXXGGXXNXGXXXFXX 705
           P      PPG   G G G   P P     P      PPP         G           
Sbjct: 302 PPPPHPLPPGAGAGAGTGAPPPPPAHPAAP----APPPPAPSPSAAGAGSGPPPPPPPAA 357

Query: 706 GGGXXPPGXXFFFXKXPPPXKKXXXXXGXXPPXKXGAP 819
                PPG        PPP        G  PP   G P
Sbjct: 358 PAAPRPPGPG--PGPPPPPGAAGRGGGGPPPPALPGGP 393


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 18/47 (38%), Positives = 18/47 (38%)
 Frame = +2

Query: 287 GPPNPXXKKXPXGXIPXLKLFXPPXKNXGEKKNF*KXGGXPPPXLGG 427
           GPP P   K P    P      PP    G KK     G  PPP  GG
Sbjct: 343 GPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKG----GPPPPPPKGG 385


>01_03_0005 + 11568545-11569119,11569179-11569191
          Length = 195

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 18/57 (31%), Positives = 19/57 (33%)
 Frame = -3

Query: 577 PPPXXKXPPGXXFFXXRGGGXPPVFF*XPPXKKXXXGXXGGXFFGGETXXPPQXXGG 407
           P P    PP        GGG   V +  PP      G  G    GG    PP   GG
Sbjct: 65  PTPQCPPPPSYPSGGGGGGGGGTVMYTSPP-PPYSGGGGGSSTGGGGIYYPPPTGGG 120


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,306,809
Number of Sequences: 37544
Number of extensions: 467802
Number of successful extensions: 680
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 652
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2256438528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)