Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_K17
(1061 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 37 0.028
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 34 0.20
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.26
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.26
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 33 0.34
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 33 0.34
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 33 0.46
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 33 0.46
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 31 1.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.8
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.8
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.8
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 30 2.4
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 30 2.4
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 30 2.4
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 30 2.4
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 2.4
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 30 2.4
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 30 2.4
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 30 3.2
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 30 3.2
Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical pr... 28 9.8
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 28 9.8
AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical... 28 9.8
AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical... 28 9.8
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 28 9.8
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 28 9.8
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 28 9.8
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 9.8
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 36.7 bits (81), Expect = 0.028
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2
Query: 791 PPPPPPXKKXXXGXXXXPXPPPP 859
PPPPPP +K G P PPPP
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPPPP 144
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 33.9 bits (74), Expect = 0.20
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2
Query: 791 PPPPPPXKKXXXGXXXXPXPPPP 859
PPPPPP + G P PPPP
Sbjct: 562 PPPPPPLPQNLSGAPPPPPPPPP 584
Score = 32.3 bits (70), Expect = 0.60
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +2
Query: 761 PPXKKXXKXXPPPPPPXKKXXXGXXXXPXPPPP 859
PP + PPPPPP G P PPPP
Sbjct: 566 PPLPQNLSGAPPPPPPPPPMLGGPP--PPPPPP 596
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 791 PPPPPPXKKXXXGXXXXPXPPPP 859
PPPPPP P PPPP
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPPP 583
Score = 28.7 bits (61), Expect = 7.4
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +2
Query: 761 PPXKKXXKXXPPPPPPXKKXXXGXXXXPXPPP 856
PP PPPPP G P PPP
Sbjct: 565 PPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPP 596
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.5 bits (73), Expect = 0.26
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2
Query: 791 PPPPPPXKKXXXGXXXXPXPPPP 859
PPPPPP + G P PPPP
Sbjct: 317 PPPPPPSRFGPPGMGGMPPPPPP 339
Score = 32.7 bits (71), Expect = 0.46
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = +2
Query: 761 PPXKKXXKXXPPPPPPXKKXXX-GXXXXPXPPPPXK 865
PP PPPPPP + G P PPPP +
Sbjct: 289 PPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSR 324
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +2
Query: 761 PPXKKXXKXXPPPPPPXKKXXXGXXXXPXPPPP 859
PP PPPPPP G P PPP
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP 319
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2
Query: 791 PPPPPPXKKXXXGXXXXPXPPPP 859
PPPPPP + G P PPPP
Sbjct: 334 PPPPPPGMRYPGG---MPPPPPP 353
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +2
Query: 761 PPXKKXXKXXPPPPPPXKKXXXGXXXXPXPPP 856
PP PPPPP + G P PPP
Sbjct: 337 PPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPP 368
Score = 28.3 bits (60), Expect = 9.8
Identities = 21/87 (24%), Positives = 24/87 (27%), Gaps = 5/87 (5%)
Frame = +2
Query: 614 PPPPXKXFFXGGXKXTXXPPHXKXXXXXXXXXXXXXXXKXXXXXXXXXXPPXKKXXKXXP 793
PPPP + G PP PP + P
Sbjct: 301 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGP 360
Query: 794 ---PPPPPXKKXXX--GXXXXPXPPPP 859
PPPPP + G P PPPP
Sbjct: 361 GMYPPPPPSRPPAPPSGHGMIPPPPPP 387
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.5 bits (73), Expect = 0.26
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2
Query: 791 PPPPPPXKKXXXGXXXXPXPPPP 859
PPPPPP + G P PPPP
Sbjct: 327 PPPPPPSRFGPPGMGGMPPPPPP 349
Score = 32.7 bits (71), Expect = 0.46
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = +2
Query: 761 PPXKKXXKXXPPPPPPXKKXXX-GXXXXPXPPPPXK 865
PP PPPPPP + G P PPPP +
Sbjct: 299 PPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSR 334
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +2
Query: 761 PPXKKXXKXXPPPPPPXKKXXXGXXXXPXPPPP 859
PP PPPPPP G P PPP
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP 329
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2
Query: 791 PPPPPPXKKXXXGXXXXPXPPPP 859
PPPPPP + G P PPPP
Sbjct: 344 PPPPPPGMRYPGG---MPPPPPP 363
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +2
Query: 761 PPXKKXXKXXPPPPPPXKKXXXGXXXXPXPPP 856
PP PPPPP + G P PPP
Sbjct: 347 PPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPP 378
Score = 28.3 bits (60), Expect = 9.8
Identities = 21/87 (24%), Positives = 24/87 (27%), Gaps = 5/87 (5%)
Frame = +2
Query: 614 PPPPXKXFFXGGXKXTXXPPHXKXXXXXXXXXXXXXXXKXXXXXXXXXXPPXKKXXKXXP 793
PPPP + G PP PP + P
Sbjct: 311 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGP 370
Query: 794 ---PPPPPXKKXXX--GXXXXPXPPPP 859
PPPPP + G P PPPP
Sbjct: 371 GMYPPPPPSRPPAPPSGHGMIPPPPPP 397
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 33.1 bits (72), Expect = 0.34
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 791 PPPPPPXKKXXXGXXXXPXPPPP 859
PPPPPP G P PPPP
Sbjct: 794 PPPPPPLPPISSGAPPPPPPPPP 816
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 33.1 bits (72), Expect = 0.34
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 791 PPPPPPXKKXXXGXXXXPXPPPP 859
PPPPPP G P PPPP
Sbjct: 794 PPPPPPLPPISSGAPPPPPPPPP 816
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 32.7 bits (71), Expect = 0.46
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 764 PXKKXXKXXPPPPPPXKKXXXGXXXXPXPPPP 859
P PPPPPP G P PPPP
Sbjct: 624 PISSAAPPPPPPPPPMGLPAVGAGAPPPPPPP 655
Score = 28.7 bits (61), Expect = 7.4
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 791 PPPPPPXKKXXXGXXXXPXPPPP 859
PPPPPP + PPPP
Sbjct: 611 PPPPPPPQSFGMAPISSAAPPPP 633
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 32.7 bits (71), Expect = 0.46
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 764 PXKKXXKXXPPPPPPXKKXXXGXXXXPXPPPP 859
P PPPPPP G P PPPP
Sbjct: 450 PISSAAPPPPPPPPPMGLPAVGAGAPPPPPPP 481
Score = 28.7 bits (61), Expect = 7.4
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 791 PPPPPPXKKXXXGXXXXPXPPPP 859
PPPPPP + PPPP
Sbjct: 437 PPPPPPPQSFGMAPISSAAPPPP 459
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 31.5 bits (68), Expect = 1.1
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 764 PXKKXXKXXPPPPPPXKKXXXGXXXXPXPPPP 859
P K PPPPPP P PPPP
Sbjct: 58 PNDNIVKATPPPPPPPPPLISILQQAPPPPPP 89
Score = 29.5 bits (63), Expect = 4.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 791 PPPPPPXKKXXXGXXXXPXPPPP 859
PPPPPP P PPPP
Sbjct: 70 PPPPPPLISILQQAPPPPPPPPP 92
Score = 28.7 bits (61), Expect = 7.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 791 PPPPPPXKKXXXGXXXXPXPPPP 859
PPPPPP P PPPP
Sbjct: 68 PPPPPPPPLISILQQAPPPPPPP 90
Score = 28.7 bits (61), Expect = 7.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 791 PPPPPPXKKXXXGXXXXPXPPPP 859
PPPPPP P PPPP
Sbjct: 69 PPPPPPPLISILQQAPPPPPPPP 91
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.7 bits (66), Expect = 1.8
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 761 PPXKKXXKXXPPPPPPXKKXXXGXXXXPXPPPP 859
PP PPPPPP G P PPPP
Sbjct: 759 PPPPPPPGGCPPPPPP--PPPGGFKGGPPPPPP 789
Score = 29.9 bits (64), Expect = 3.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 791 PPPPPPXKKXXXGXXXXPXPPPP 859
PPPPPP P PPPP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPP 765
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.7 bits (66), Expect = 1.8
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 761 PPXKKXXKXXPPPPPPXKKXXXGXXXXPXPPPP 859
PP PPPPPP G P PPPP
Sbjct: 759 PPPPPPPGGCPPPPPP--PPPGGFKGGPPPPPP 789
Score = 29.9 bits (64), Expect = 3.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 791 PPPPPPXKKXXXGXXXXPXPPPP 859
PPPPPP P PPPP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPP 765
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.7 bits (66), Expect = 1.8
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 761 PPXKKXXKXXPPPPPPXKKXXXGXXXXPXPPPP 859
PP PPPPPP G P PPPP
Sbjct: 342 PPPPPPPGGCPPPPPP--PPPGGFKGGPPPPPP 372
Score = 29.9 bits (64), Expect = 3.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 791 PPPPPPXKKXXXGXXXXPXPPPP 859
PPPPPP P PPPP
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPP 348
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 794 PPPPPXKKXXXGXXXXPXPPPP 859
PPPPP G P PPPP
Sbjct: 39 PPPPPPPPCGGGYEAPPPPPPP 60
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 791 PPPPPPXKKXXXGXXXXPXPPPP 859
PPPPPP P PPPP
Sbjct: 156 PPPPPPPPVSVPSSKPTPPPPPP 178
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 791 PPPPPPXKKXXXGXXXXPXPPPP 859
PPPPPP P PPPP
Sbjct: 156 PPPPPPPPVSVPSSKPTPPPPPP 178
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 794 PPPPPXKKXXXGXXXXPXPPPP 859
PPPPP G P PPPP
Sbjct: 234 PPPPPLPPVGAGAPPPPPPPPP 255
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 791 PPPPPPXKKXXXGXXXXPXPPPP 859
PPPPPP P PPPP
Sbjct: 1339 PPPPPPPPPPSDDLTPVPPPPPP 1361
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 791 PPPPPPXKKXXXGXXXXPXPPPP 859
PPPPPP P PPPP
Sbjct: 1341 PPPPPPPPSDDLTPVPPPPPPPP 1363
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 791 PPPPPPXKKXXXGXXXXPXPPPP 859
PPPPPP P PPPP
Sbjct: 1358 PPPPPPTMSKAPTGVPLPVPPPP 1380
Score = 29.9 bits (64), Expect = 3.2
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +2
Query: 761 PPXKKXXKXXPPPPPPXKKXXXGXXXXPXPPPP 859
PP PPPPPP P P PP
Sbjct: 1346 PPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPP 1378
Score = 29.5 bits (63), Expect = 4.2
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Frame = +2
Query: 761 PPXKKXXKXXPPPPPP--XKKXXXGXXXXPXPPPP 859
PP PPPPPP K G PPPP
Sbjct: 1347 PPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPP 1381
Score = 29.1 bits (62), Expect = 5.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 791 PPPPPPXKKXXXGXXXXPXPPPP 859
PPPPPP P PPPP
Sbjct: 1340 PPPPPPPPPSDDLTPVPPPPPPP 1362
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 794 PPPPPXKKXXXGXXXXPXPPPP 859
PPPPP G P PPPP
Sbjct: 220 PPPPPLPPVGAGAPPPPPPPPP 241
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 794 PPPPPXKKXXXGXXXXPXPPPP 859
PPPPP G P PPPP
Sbjct: 220 PPPPPLPPVGAGAPPPPPPPPP 241
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 29.9 bits (64), Expect = 3.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 791 PPPPPPXKKXXXGXXXXPXPPPP 859
PPPPPP P PPPP
Sbjct: 489 PPPPPPLPPIATPSSVPPPPPPP 511
Score = 28.3 bits (60), Expect = 9.8
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +2
Query: 761 PPXKKXXKXXPPPPPPXKKXXXGXXXXPXPPPP 859
P + K PPPPP P PPPP
Sbjct: 480 PQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPP 512
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.9 bits (64), Expect = 3.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 791 PPPPPPXKKXXXGXXXXPXPPPP 859
PPPPPP P PPPP
Sbjct: 496 PPPPPPLPPIATPSSVPPPPPPP 518
Score = 28.3 bits (60), Expect = 9.8
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +2
Query: 761 PPXKKXXKXXPPPPPPXKKXXXGXXXXPXPPPP 859
P + K PPPPP P PPPP
Sbjct: 487 PQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPP 519
>Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 28.3 bits (60), Expect = 9.8
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 761 PPXKKXXKXXPPPPPPXK 814
PP +K PPPPPP K
Sbjct: 243 PPREKSVPPPPPPPPPPK 260
>Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 28.3 bits (60), Expect = 9.8
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 761 PPXKKXXKXXPPPPPPXK 814
PP +K PPPPPP K
Sbjct: 258 PPREKSVPPPPPPPPPPK 275
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 28.3 bits (60), Expect = 9.8
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +2
Query: 761 PPXKKXXKXXPPPPPPXKKXXXGXXXXPXPPPP 859
PP PPPPPP PPPP
Sbjct: 665 PPGGLGGFMPPPPPPPPMPGDLSSLLAAAPPPP 697
>AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 28.3 bits (60), Expect = 9.8
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 761 PPXKKXXKXXPPPPPPXK 814
PP +K PPPPPP K
Sbjct: 243 PPREKSVPPPPPPPPPPK 260
>AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 28.3 bits (60), Expect = 9.8
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 761 PPXKKXXKXXPPPPPPXK 814
PP +K PPPPPP K
Sbjct: 258 PPREKSVPPPPPPPPPPK 275
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 28.3 bits (60), Expect = 9.8
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +2
Query: 761 PPXKKXXKXXPPPPPPXKKXXXGXXXXPXPPPP 859
PP PPPPPP PPPP
Sbjct: 665 PPGGLGGFMPPPPPPPPMPGDLSSLLAAAPPPP 697
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 28.3 bits (60), Expect = 9.8
Identities = 18/48 (37%), Positives = 20/48 (41%)
Frame = +1
Query: 250 PPFRKKXXGFFXPPQKKKNXGXFFXXGPPXFLGTXF*XGAPPPPPXXG 393
PPF GFF PP + F PP F+G PPPP G
Sbjct: 291 PPF-----GFFPPPPR-----GHFPPPPPHFMGRGMPPPFMPPPPHFG 328
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 28.3 bits (60), Expect = 9.8
Identities = 18/48 (37%), Positives = 20/48 (41%)
Frame = +1
Query: 250 PPFRKKXXGFFXPPQKKKNXGXFFXXGPPXFLGTXF*XGAPPPPPXXG 393
PPF GFF PP + F PP F+G PPPP G
Sbjct: 291 PPF-----GFFPPPPR-----GHFPPPPPHFMGRGMPPPFMPPPPHFG 328
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.3 bits (60), Expect = 9.8
Identities = 19/60 (31%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Frame = +1
Query: 208 PPIGXNSRKXGPEXPPFRKKXXGF--FXPPQKKKNXGXFFXXGPPXFLGTXF*XGAPPPP 381
PP+ G PPF + F PP + G PP F G G PPPP
Sbjct: 744 PPMFQQGFNAGAPPPPFGRGAGPMSSFPPPPR---GGMHHMPPPPSFRGGRGGHGGPPPP 800
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,988,688
Number of Sequences: 27780
Number of extensions: 264615
Number of successful extensions: 2175
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1731
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2835266498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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