Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_K09
         (930 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC066300-1|AAH66300.1|   85|Homo sapiens cell division cycle 26 ...    42   0.003
BC042534-1|AAH42534.1|   85|Homo sapiens cell division cycle 26 ...    42   0.003
AL449305-6|CAI10967.1|   85|Homo sapiens cell division cycle 26 ...    42   0.003
AF503918-1|AAM34207.1|   85|Homo sapiens CDC26 subunit of anapha...    42   0.003

>BC066300-1|AAH66300.1|   85|Homo sapiens cell division cycle 26
           homolog (S. cerevisiae) protein.
          Length = 85

 Score = 41.9 bits (94), Expect = 0.003
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
 Frame = +1

Query: 106 MIRRPLTEITLKLDDLQEYEAYRREKSNTSSTGAEMQ----EDTPKSLGAGT--KTSED- 264
           M+RR  T + LKLDD++E+E  R++         +++     D   ++G  +  K+ E  
Sbjct: 1   MLRRKPTRLELKLDDIEEFENIRKDLETRKKQKEDVEVVGGSDGEGAIGLSSDPKSREQM 60

Query: 265 IHNRIGYAPKKKPSGPST 318
           I++RIGY P+ KP+  S+
Sbjct: 61  INDRIGYKPQPKPNNRSS 78


>BC042534-1|AAH42534.1|   85|Homo sapiens cell division cycle 26
           homolog (S. cerevisiae) protein.
          Length = 85

 Score = 41.9 bits (94), Expect = 0.003
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
 Frame = +1

Query: 106 MIRRPLTEITLKLDDLQEYEAYRREKSNTSSTGAEMQ----EDTPKSLGAGT--KTSED- 264
           M+RR  T + LKLDD++E+E  R++         +++     D   ++G  +  K+ E  
Sbjct: 1   MLRRKPTRLELKLDDIEEFENIRKDLETRKKQKEDVEVVGGSDGEGAIGLSSDPKSREQM 60

Query: 265 IHNRIGYAPKKKPSGPST 318
           I++RIGY P+ KP+  S+
Sbjct: 61  INDRIGYKPQPKPNNRSS 78


>AL449305-6|CAI10967.1|   85|Homo sapiens cell division cycle 26
           homolog (S. cerevisiae) protein.
          Length = 85

 Score = 41.9 bits (94), Expect = 0.003
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
 Frame = +1

Query: 106 MIRRPLTEITLKLDDLQEYEAYRREKSNTSSTGAEMQ----EDTPKSLGAGT--KTSED- 264
           M+RR  T + LKLDD++E+E  R++         +++     D   ++G  +  K+ E  
Sbjct: 1   MLRRKPTRLELKLDDIEEFENIRKDLETRKKQKEDVEVVGGSDGEGAIGLSSDPKSREQM 60

Query: 265 IHNRIGYAPKKKPSGPST 318
           I++RIGY P+ KP+  S+
Sbjct: 61  INDRIGYKPQPKPNNRSS 78


>AF503918-1|AAM34207.1|   85|Homo sapiens CDC26 subunit of anaphase
           promoting complex protein.
          Length = 85

 Score = 41.9 bits (94), Expect = 0.003
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
 Frame = +1

Query: 106 MIRRPLTEITLKLDDLQEYEAYRREKSNTSSTGAEMQ----EDTPKSLGAGT--KTSED- 264
           M+RR  T + LKLDD++E+E  R++         +++     D   ++G  +  K+ E  
Sbjct: 1   MLRRKPTRLELKLDDIEEFENIRKDLETRKKQKEDVEVVGGSDGEGAIGLSSDPKSREQM 60

Query: 265 IHNRIGYAPKKKPSGPST 318
           I++RIGY P+ KP+  S+
Sbjct: 61  INDRIGYKPQPKPNNRSS 78


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,825,409
Number of Sequences: 237096
Number of extensions: 1857498
Number of successful extensions: 3567
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3490
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12158972418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)