Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_K05
(928 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40419-2|AAK67217.1| 269|Caenorhabditis elegans Hypothetical pr... 167 7e-42
Z81055-4|CAB02893.1| 824|Caenorhabditis elegans Hypothetical pr... 35 0.072
Z72507-14|CAA96630.2| 383|Caenorhabditis elegans Hypothetical p... 33 0.29
AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical ... 32 0.51
Z49127-3|CAA88946.1| 523|Caenorhabditis elegans Hypothetical pr... 32 0.67
Z81139-8|CAB03483.2| 361|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z81062-15|CAB02950.2| 361|Caenorhabditis elegans Hypothetical p... 30 2.7
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 29 3.6
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 3.6
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 3.6
Z46676-6|CAA86666.1| 503|Caenorhabditis elegans Hypothetical pr... 29 4.7
AF016446-4|AAC24164.1| 321|Caenorhabditis elegans Serpentine re... 29 4.7
AL110479-6|CAB54354.2| 447|Caenorhabditis elegans Hypothetical ... 29 6.2
AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical... 29 6.2
AC024741-1|AAK68394.3| 789|Caenorhabditis elegans Hypothetical ... 28 8.2
>U40419-2|AAK67217.1| 269|Caenorhabditis elegans Hypothetical
protein C27F2.5 protein.
Length = 269
Score = 167 bits (407), Expect = 7e-42
Identities = 80/152 (52%), Positives = 107/152 (70%), Gaps = 1/152 (0%)
Frame = +3
Query: 288 LGVGAIQKHRLEQEKYKEKGTEIQENQFQQMSKQLEVFRENLEDFASKHKSEIKKNAQFR 467
+GV AIQK + K+ KG ++ Q Q S+QLE LE FA +H+ EIKKN+QFR
Sbjct: 7 IGVAAIQKKQETANKFAAKGDQMAGEQLVQFSQQLEQLSAGLEMFAQRHRDEIKKNSQFR 66
Query: 468 RQFQEMCAAIGVDPLASGKGFWS-VLGIGDFYYELGVQIVEVCLATNYKNGGLITLEELR 644
R FQEMCA++GVDPLAS KGFW+ LG GDFYYELG+QIVE+CL+T + NGG++T+EE+R
Sbjct: 67 RHFQEMCASVGVDPLASSKGFWAKALGFGDFYYELGIQIVEICLSTTHINGGIMTVEEIR 126
Query: 645 TRLIASRGRAKKHQDITNEXLLXAXXX*RXLG 740
RL+ +R R +K I+ + +L A + LG
Sbjct: 127 NRLMRTRSRTRK-DTISTDDILRAVDKLKVLG 157
>Z81055-4|CAB02893.1| 824|Caenorhabditis elegans Hypothetical
protein F01G10.5 protein.
Length = 824
Score = 35.1 bits (77), Expect = 0.072
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +3
Query: 330 KYKEKGTEIQENQFQQMSKQLEVFRENLEDFASKHKSEIKK 452
+YKE+ T ENQ Q ++E + +L+ +KH+SE+K+
Sbjct: 559 QYKER-TSALENQLSQKDAEIENLKRDLQQLVTKHESELKE 598
>Z72507-14|CAA96630.2| 383|Caenorhabditis elegans Hypothetical
protein F17C11.8 protein.
Length = 383
Score = 33.1 bits (72), Expect = 0.29
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 6/133 (4%)
Frame = +3
Query: 288 LGVGAIQKHRLEQEKYKEKGTEIQENQFQQMSKQLEVFRE------NLEDFASKHKSEIK 449
+G+ I++ RL + K T Q F MSK +E RE ++ + K EI
Sbjct: 152 VGISGIER-RLAENHQKTHETITQA--FDDMSKLMETAREMVALSKSISEKVRSRKGEIS 208
Query: 450 KNAQFRRQFQEMCAAIGVDPLASGKGFWSVLGIGDFYYELGVQIVEVCLATNYKNGGLIT 629
++ F+ ++GV + F V +++ +L +I +V +NGG+
Sbjct: 209 EDETIA--FKSYLLSLGVSDPVTKSTF--VGSDSEYFQKLAKEISDVLYEHIKENGGMCA 264
Query: 630 LEELRTRLIASRG 668
L E+ R+ +RG
Sbjct: 265 LPEVYCRINRARG 277
>AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical
protein Y26D4A.14 protein.
Length = 952
Score = 32.3 bits (70), Expect = 0.51
Identities = 14/61 (22%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Frame = +3
Query: 306 QKHRLEQEKYKEKGTEI--QENQFQQMSKQLEVFRENLEDFASKHKSEIKKNAQFRRQFQ 479
Q+H+ + E+Y+++ EI +E + +Q +++ E ++ +DF + + ++++ + ++Q Q
Sbjct: 203 QRHKQQLEEYEKRNQEILRREEEIKQQNQERE--KQINDDFEKRKQEKLQREEEMKQQNQ 260
Query: 480 E 482
E
Sbjct: 261 E 261
>Z49127-3|CAA88946.1| 523|Caenorhabditis elegans Hypothetical
protein F13D12.4a protein.
Length = 523
Score = 31.9 bits (69), Expect = 0.67
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = -2
Query: 459 EHSSLFHSCVLMQNLPNFP*TLPVVSTSAGIGFLVFLCPFLYISLVPICVFGLHLHQAMN 280
EH+ S ++ + LPN + S +G +CPF + +++P+ +F + L
Sbjct: 136 EHACSVPSLMMGETLPNVSRDMDTHSYRIPLGVTAGICPFNFPAMIPLWMFPVALATGNT 195
Query: 279 MLI 271
M+I
Sbjct: 196 MVI 198
>Z81139-8|CAB03483.2| 361|Caenorhabditis elegans Hypothetical
protein W05H5.7 protein.
Length = 361
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = -3
Query: 404 PKHFQLFRHLLELVFLYFCALFFIFLLFQSVFLDCTYTKL*IC*YQNIYCVW*VFIDTHT 225
P FQ+ ++ELVF C L+ + + + L I Y ++CVW I
Sbjct: 25 PFQFQILSSIIELVFYISCFHLMTISLYVMLKVQIFHRNLYIL-YIPMFCVWYGLIAGKL 83
Query: 224 INLIFEVNF 198
I + + + F
Sbjct: 84 ITIAYRLKF 92
>Z81062-15|CAB02950.2| 361|Caenorhabditis elegans Hypothetical
protein W05H5.7 protein.
Length = 361
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = -3
Query: 404 PKHFQLFRHLLELVFLYFCALFFIFLLFQSVFLDCTYTKL*IC*YQNIYCVW*VFIDTHT 225
P FQ+ ++ELVF C L+ + + + L I Y ++CVW I
Sbjct: 25 PFQFQILSSIIELVFYISCFHLMTISLYVMLKVQIFHRNLYIL-YIPMFCVWYGLIAGKL 83
Query: 224 INLIFEVNF 198
I + + + F
Sbjct: 84 ITIAYRLKF 92
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = +3
Query: 309 KHRLEQEKYKEKGTEIQ----ENQFQQMSKQLEVFRENLEDFASKHKSEIKKNAQFRRQF 476
++ LE EK + G ENQ ++ +QLEV E++ ++KKN Q +++
Sbjct: 1599 ENELENEKRGKSGAVSHRKKIENQIGELEQQLEVANRLKEEY----NKQLKKNQQIIKEY 1654
Query: 477 QEMC 488
Q C
Sbjct: 1655 QIEC 1658
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = -3
Query: 455 ILLYFTLVF*CKIFQIFPKHFQLFRHLLELVFLYFCALFFIFLLFQS 315
ILL F L F F K+ + ++L +V L CALF I + F S
Sbjct: 138 ILLVFVLGFLALKSGFFGKNANIMAYVLLIVILPICALFQILIQFVS 184
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = -3
Query: 455 ILLYFTLVF*CKIFQIFPKHFQLFRHLLELVFLYFCALFFIFLLFQS 315
ILL F L F F K+ + ++L +V L CALF I + F S
Sbjct: 138 ILLVFVLGFLALKSGFFGKNANIMAYVLLIVILPICALFQILIQFVS 184
>Z46676-6|CAA86666.1| 503|Caenorhabditis elegans Hypothetical
protein C08B11.8 protein.
Length = 503
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = -3
Query: 470 PSELSILLYFTLVF*CKIFQIFPKHFQLFRHLLELVFLYFCALFFIFLLFQSVFLDCTYT 291
P ++S +L + F I +++ Q F H+ +L +F + FI+ L F T
Sbjct: 441 PRKISHILTILIGFAICILELYGPSNQRFPHIYQLANAFFSCVHFIYFLLYLSFASFEKT 500
Query: 290 K 288
K
Sbjct: 501 K 501
>AF016446-4|AAC24164.1| 321|Caenorhabditis elegans Serpentine
receptor, class h protein23 protein.
Length = 321
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -3
Query: 404 PKHFQLFRHLLELVFL--YFCALFFIFLLFQSVFLDCTY 294
P F++F H + V L YF ALF +F + VF+ Y
Sbjct: 8 PLIFRIFTHSIHFVSLPTYFLALFSLFFIKSKVFVTYRY 46
>AL110479-6|CAB54354.2| 447|Caenorhabditis elegans Hypothetical
protein Y105C5B.8 protein.
Length = 447
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = -3
Query: 449 LYFTLVF*CKIFQIFPKHFQLFRHLLELV--FLYFCALFFIFLLFQSVFLD 303
++F L + + F FQ +R V YFCA F IF SV+ D
Sbjct: 113 IFFQLFYIAVVLNTFMAKFQFWRSNENFVRGVAYFCAFFSIFEPLPSVYKD 163
>AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical
protein Y51A2D.15 protein.
Length = 1222
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/57 (17%), Positives = 37/57 (64%)
Frame = +3
Query: 300 AIQKHRLEQEKYKEKGTEIQENQFQQMSKQLEVFRENLEDFASKHKSEIKKNAQFRR 470
+I+ +++++ K++ T++++ + Q+M K + +NL++ + HK+ + +++ ++
Sbjct: 839 SIRNSQIQEDLVKQENTKLRD-ELQEMQKMSKKRSQNLDELENMHKTLLVDHSRLQQ 894
>AC024741-1|AAK68394.3| 789|Caenorhabditis elegans Hypothetical
protein R05G9R.1 protein.
Length = 789
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 322 NKRNIKKRAQKYKKTNSSRCRNNWKCLGK 408
NK+N KK Q YK+T + C+ KCL K
Sbjct: 629 NKKNAKKMEQ-YKRTLQTGCQRYDKCLRK 656
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,572,571
Number of Sequences: 27780
Number of extensions: 403520
Number of successful extensions: 1299
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1296
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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