Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_K04
(989 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.059
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.059
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.059
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.42
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.42
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.42
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 31 1.3
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z81059-5|CAJ15164.1| 176|Caenorhabditis elegans Hypothetical pr... 30 2.9
Z81059-3|CAB02927.1| 246|Caenorhabditis elegans Hypothetical pr... 30 2.9
Z81059-2|CAB02926.1| 240|Caenorhabditis elegans Hypothetical pr... 30 2.9
Z81059-1|CAB02925.1| 249|Caenorhabditis elegans Hypothetical pr... 30 2.9
Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical pr... 29 3.9
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 3.9
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 3.9
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 3.9
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 29 5.1
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 29 5.1
AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical... 29 5.1
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 6.8
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 6.8
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 6.8
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 6.8
AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protei... 29 6.8
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 6.8
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 28 8.9
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 28 8.9
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.5 bits (78), Expect = 0.059
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +1
Query: 793 PPXXRPXXXXXXPPXPPTTXSXPXXAXTPPNPPXPXKXTPPHXXP 927
PP P PP PP P PP PP P PP P
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +1
Query: 793 PPXXRPXXXXXXPPXPPTTXSXPXXAXTPPNPPXPXKXTPPHXXP 927
PP P PP PP P PP PP P P P
Sbjct: 715 PPPGLPPITGGPPPPPP-PGGLPPITGGPPPPPPPGGLPPISGGP 758
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 2/47 (4%)
Frame = +1
Query: 793 PPXXRPXXXXXXPPXPPTTXSXPXXAXTPPNPPXP--XKXTPPHXXP 927
PP P PP PP P PP PP P K PP P
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPP----PPPPPPPGGFKGGPPPPPP 789
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.5 bits (78), Expect = 0.059
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +1
Query: 793 PPXXRPXXXXXXPPXPPTTXSXPXXAXTPPNPPXPXKXTPPHXXP 927
PP P PP PP P PP PP P PP P
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +1
Query: 793 PPXXRPXXXXXXPPXPPTTXSXPXXAXTPPNPPXPXKXTPPHXXP 927
PP P PP PP P PP PP P P P
Sbjct: 715 PPPGLPPITGGPPPPPP-PGGLPPITGGPPPPPPPGGLPPISGGP 758
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 2/47 (4%)
Frame = +1
Query: 793 PPXXRPXXXXXXPPXPPTTXSXPXXAXTPPNPPXP--XKXTPPHXXP 927
PP P PP PP P PP PP P K PP P
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPP----PPPPPPPGGFKGGPPPPPP 789
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.5 bits (78), Expect = 0.059
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +1
Query: 793 PPXXRPXXXXXXPPXPPTTXSXPXXAXTPPNPPXPXKXTPPHXXP 927
PP P PP PP P PP PP P PP P
Sbjct: 314 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +1
Query: 793 PPXXRPXXXXXXPPXPPTTXSXPXXAXTPPNPPXPXKXTPPHXXP 927
PP P PP PP P PP PP P P P
Sbjct: 298 PPPGLPPITGGPPPPPP-PGGLPPITGGPPPPPPPGGLPPISGGP 341
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 2/47 (4%)
Frame = +1
Query: 793 PPXXRPXXXXXXPPXPPTTXSXPXXAXTPPNPPXP--XKXTPPHXXP 927
PP P PP PP P PP PP P K PP P
Sbjct: 330 PPGGLPPISGGPPPPPPPPGGCPP----PPPPPPPGGFKGGPPPPPP 372
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.7 bits (71), Expect = 0.42
Identities = 17/51 (33%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
Frame = +1
Query: 775 PKSXXFPPXXR----PXXXXXXPPXPPTTXSXPXXAXTPPNPPXPXKXTPP 915
P + PP R P PP PP S P P PP P + +PP
Sbjct: 258 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 308
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +1
Query: 793 PPXXRPXXXXXXPPXPPTTXSXPXXAXTPPNPPXPXKXTPP 915
PP P P PP P T PP P PP
Sbjct: 242 PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 282
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +1
Query: 793 PPXXRPXXXXXXPPXPPTTXSXPXXAXTPPNPPXPXKXTPP 915
P P PP PP S P P PP PP
Sbjct: 243 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 283
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.7 bits (71), Expect = 0.42
Identities = 17/51 (33%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
Frame = +1
Query: 775 PKSXXFPPXXR----PXXXXXXPPXPPTTXSXPXXAXTPPNPPXPXKXTPP 915
P + PP R P PP PP S P P PP P + +PP
Sbjct: 279 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 329
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +1
Query: 793 PPXXRPXXXXXXPPXPPTTXSXPXXAXTPPNPPXPXKXTPP 915
PP P P PP P T PP P PP
Sbjct: 263 PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 303
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +1
Query: 793 PPXXRPXXXXXXPPXPPTTXSXPXXAXTPPNPPXPXKXTPP 915
P P PP PP S P P PP PP
Sbjct: 264 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 304
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.7 bits (71), Expect = 0.42
Identities = 17/51 (33%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
Frame = +1
Query: 775 PKSXXFPPXXR----PXXXXXXPPXPPTTXSXPXXAXTPPNPPXPXKXTPP 915
P + PP R P PP PP S P P PP P + +PP
Sbjct: 264 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 314
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +1
Query: 793 PPXXRPXXXXXXPPXPPTTXSXPXXAXTPPNPPXPXKXTPP 915
PP P P PP P T PP P PP
Sbjct: 248 PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 288
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +1
Query: 793 PPXXRPXXXXXXPPXPPTTXSXPXXAXTPPNPPXPXKXTPP 915
P P PP PP S P P PP PP
Sbjct: 249 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 289
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 829 PPXPPTTXSXPXXAXTPPNPPXPXKXTP 912
PP PP T P PP PP P P
Sbjct: 125 PPNPPRTCCPPPTPAAPPPPPPPPPPAP 152
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 829 PPXPPTTXSXPXXAXTPPNPPXPXKXTPPHXXP 927
PP PP S + PP PP TPP P
Sbjct: 123 PPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSP 155
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/42 (35%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Frame = +1
Query: 793 PPXXRPXXXXXXPPX-PPTTXSXPXXAXTPPNPPXPXKXTPP 915
PP RP P PP T P P PP P PP
Sbjct: 155 PPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPP 196
>Z81059-5|CAJ15164.1| 176|Caenorhabditis elegans Hypothetical
protein F11F1.8 protein.
Length = 176
Score = 29.9 bits (64), Expect = 2.9
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = -1
Query: 914 GGVXXXGXGGFGGVXAXXGXXCVVGGXGGXXXXXXGRXXGGNXXDLGXV 768
GG+ G GG GG+ G ++GG G G GG LG +
Sbjct: 35 GGILGGGEGGLGGILGNGGLGGILGGNG------LGGVLGGEDGGLGGI 77
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = -1
Query: 932 VXGXXXGGVXXX-GXGGFGGVXAXXGXXCVVGGXGGXXXXXXGRXXGGNXXDL 777
+ G GG+ G GG GG+ G V+GG G G+ G +L
Sbjct: 37 ILGGGEGGLGGILGNGGLGGILGGNGLGGVLGGEDGGLGGIIGQLLGSANDEL 89
>Z81059-3|CAB02927.1| 246|Caenorhabditis elegans Hypothetical
protein F11F1.5 protein.
Length = 246
Score = 29.9 bits (64), Expect = 2.9
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = -1
Query: 914 GGVXXXGXGGFGGVXAXXGXXCVVGGXGGXXXXXXGRXXGGNXXDLGXV 768
GG+ G GG GG+ G ++GG G G GG LG +
Sbjct: 35 GGILGGGEGGLGGILGNGGLGGILGGNG------LGGILGGEDGGLGGI 77
>Z81059-2|CAB02926.1| 240|Caenorhabditis elegans Hypothetical
protein F11F1.4 protein.
Length = 240
Score = 29.9 bits (64), Expect = 2.9
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = -1
Query: 914 GGVXXXGXGGFGGVXAXXGXXCVVGGXGGXXXXXXGRXXGGNXXDLGXV 768
GG+ G GG GG+ G ++GG G G GG LG +
Sbjct: 29 GGILGGGEGGLGGILGNGGLGGILGGNG------LGGVLGGEDGGLGGI 71
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = -1
Query: 932 VXGXXXGGVXXX-GXGGFGGVXAXXGXXCVVGGXGGXXXXXXGRXXG 795
+ G GG+ G GG GG+ G V+GG G G+ G
Sbjct: 31 ILGGGEGGLGGILGNGGLGGILGGNGLGGVLGGEDGGLGGIIGQLLG 77
>Z81059-1|CAB02925.1| 249|Caenorhabditis elegans Hypothetical
protein F11F1.2 protein.
Length = 249
Score = 29.9 bits (64), Expect = 2.9
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = -1
Query: 914 GGVXXXGXGGFGGVXAXXGXXCVVGGXGGXXXXXXGRXXGGNXXDLGXV 768
GG+ G GG GG+ G ++GG G G GG LG +
Sbjct: 35 GGILGGGEGGLGGILGNGGLGGILGGNG------LGGVLGGEDGGLGGI 77
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = -1
Query: 932 VXGXXXGGVXXX-GXGGFGGVXAXXGXXCVVGGXGGXXXXXXGRXXG 795
+ G GG+ G GG GG+ G V+GG G G+ G
Sbjct: 37 ILGGGEGGLGGILGNGGLGGILGGNGLGGVLGGEDGGLGGIIGQLLG 83
>Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical protein
F43C1.1 protein.
Length = 1036
Score = 29.5 bits (63), Expect = 3.9
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +1
Query: 829 PPXPPTTXSXPXXAXTPPNPPXPXKXTPP 915
PP PP + +PP PP P PP
Sbjct: 945 PPVPPPIPAIRHRTPSPPPPPLPSSTPPP 973
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +1
Query: 829 PPXPPTTXSXPXXAXTPPNPPXPXKXTP 912
PP PP S P TPP PP P + P
Sbjct: 157 PPPPPPPVSVPSSKPTPP-PPPPAQQKP 183
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +1
Query: 829 PPXPPTTXSXPXXAXTPPNPPXPXKXTP 912
PP PP S P TPP PP P + P
Sbjct: 157 PPPPPPPVSVPSSKPTPP-PPPPAQQKP 183
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 829 PPXPPTTXSXPXXAXTPPNPPXPXKXTPPHXXP 927
PP PP A PP PP P PP P
Sbjct: 562 PPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPP 594
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +1
Query: 805 RPXXXXXXPPXPPTTXSXPXXAXTPPNPPXPXKXTPP 915
RP PP P + P PP PP P PP
Sbjct: 68 RPTESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPP 104
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +1
Query: 805 RPXXXXXXPPXPPTTXSXPXXAXTPPNPPXPXKXTPP 915
RP PP P + P PP PP P PP
Sbjct: 290 RPTESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPP 326
>AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical
protein Y51H7C.13 protein.
Length = 344
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +1
Query: 808 PXXXXXXPPXPPTTXSXPXXAXTPPNPPXPXKXTPPHXXP 927
P P PPTT + PP P P TPP P
Sbjct: 127 PVDQKPPPCIPPTTTTTTTTTTRPPCPYPPATNTPPAPEP 166
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = +1
Query: 793 PPXXRPXXXXXXPPXPPTTXSXPXXAXTPPNPPXPXKXTPP 915
P P P PPTT + P P PP PP
Sbjct: 170 PTTEAPPPPTTKAPPPPTTKAPPPPTTKAPPPPTTKAPPPP 210
>Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical
protein C09H6.2b protein.
Length = 954
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1
Query: 808 PXXXXXXPPXPPTTXSXPXXAXTPPNPP 891
P PP P+T S P A PP PP
Sbjct: 415 PTPFDSPPPSMPSTSSGPSGALAPPPPP 442
>Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical
protein C09H6.2a protein.
Length = 982
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1
Query: 808 PXXXXXXPPXPPTTXSXPXXAXTPPNPP 891
P PP P+T S P A PP PP
Sbjct: 443 PTPFDSPPPSMPSTSSGPSGALAPPPPP 470
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = +1
Query: 793 PPXXRPXXXXXXPPXPPTTXSXPXXAXTPPNPPXPXKXTPP 915
PP PP PP P P PP P + PP
Sbjct: 288 PPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPP 328
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = +1
Query: 793 PPXXRPXXXXXXPPXPPTTXSXPXXAXTPPNPPXPXKXTPPHXXP 927
PP P P PP P PP P P PP P
Sbjct: 31 PPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCP 75
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = +1
Query: 793 PPXXRPXXXXXXPPXPPTTXSXPXXAXTPPNPPXPXKXTPPHXXP 927
P P PP P P PP PP P PP P
Sbjct: 36 PMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPP 80
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = +1
Query: 793 PPXXRPXXXXXXPPXPPTTXSXPXXAXTPPNPPXPXKXTPP 915
PP PP PP P P PP P + PP
Sbjct: 298 PPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPP 338
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1
Query: 796 PXXRPXXXXXXPPXPPTTXSXPXXAXTPPNPPXPXKXTP 912
P +P PP PP + PP PP P P
Sbjct: 485 PSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPPP 523
>AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protein
protein.
Length = 954
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1
Query: 808 PXXXXXXPPXPPTTXSXPXXAXTPPNPP 891
P PP P+T S P A PP PP
Sbjct: 415 PTPFDSPPPSMPSTSSGPSGALAPPPPP 442
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 829 PPXPPTTXSXPXXAXTPPNPPXPXKXTPPHXXP 927
PP PP S A PP PP P P P
Sbjct: 70 PPPPPPLISILQQAPPPPPPPPPPTLKAPPPPP 102
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 28.3 bits (60), Expect = 8.9
Identities = 16/51 (31%), Positives = 19/51 (37%)
Frame = -1
Query: 926 GXXXGGVXXXGXGGFGGVXAXXGXXCVVGGXGGXXXXXXGRXXGGNXXDLG 774
G GG+ GG GG G GG GG G GG ++G
Sbjct: 40 GDILGGLASNFFGGGGGGGGGGGGGGFGGGNGGFGGGGGGSGGGGGGNNIG 90
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 28.3 bits (60), Expect = 8.9
Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = -1
Query: 926 GXXXGGVXXXGXGGFGGVXAXXGXXCVVG-GXGGXXXXXXGRXXGG 792
G GG G GG+GG+ G + G G GG G GG
Sbjct: 123 GDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGG 168
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,897,882
Number of Sequences: 27780
Number of extensions: 64253
Number of successful extensions: 944
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2584172786
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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