Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_K03
         (913 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0980 + 26520832-26520922,26521021-26521409,26521612-265219...    55   7e-08
04_04_0862 + 28843654-28844386,28844486-28844895,28844995-288455...    50   2e-06
08_02_0598 - 19149218-19149524,19150325-19150896,19151374-191517...    50   3e-06
02_05_0304 + 27721413-27721479,27721561-27722208,27722399-277233...    47   2e-05
09_03_0047 - 11867302-11867356,11867461-11868032,11868485-118688...    44   2e-04
10_08_0682 + 19858131-19858230,19858313-19858954,19859041-198600...    42   9e-04
03_01_0127 + 988066-988171,988259-988881,988986-989396,989463-99...    42   9e-04
12_02_1218 - 27088206-27088214,27088577-27088643,27088755-270888...    35   0.10 
07_03_1216 + 24940426-24940714,24940800-24940877,24941954-249421...    33   0.31 
05_05_0016 - 21542300-21542886,21542956-21543286,21543310-215434...    33   0.42 
02_03_0350 + 18027932-18028125,18028185-18028270,18028889-18028980     33   0.42 
03_02_0259 - 6920472-6920579,6920744-6921022,6921115-6921390,692...    32   0.55 
10_08_0628 + 19389508-19389637,19389774-19389850,19390332-193904...    32   0.73 
04_04_1481 - 33894175-33894537,33894618-33894739,33894841-33895225     31   0.96 
09_03_0076 - 12120900-12121183,12123083-12123188                       31   1.3  
09_04_0617 - 18981258-18981949,18983869-18984427                       31   1.7  
04_04_1545 - 34278266-34278586,34278685-34279114,34279225-342793...    30   2.2  
03_02_0260 - 6924532-6924757,6925443-6925546,6925729-6926007,692...    29   3.9  
11_06_0192 + 21128298-21128829,21129341-21129407,21131169-211312...    29   6.8  
12_02_0499 - 19725896-19726339,19726918-19726960,19727286-197273...    28   9.0  
09_03_0073 - 12092566-12092645,12092788-12092869,12092979-120932...    28   9.0  
02_01_0012 - 80014-80104,80190-80308,80480-80524,80726-80911,810...    28   9.0  

>06_03_0980 +
           26520832-26520922,26521021-26521409,26521612-26521927,
           26522869-26523769,26524103-26524184
          Length = 592

 Score = 55.2 bits (127), Expect = 7e-08
 Identities = 43/120 (35%), Positives = 60/120 (50%), Gaps = 5/120 (4%)
 Frame = +2

Query: 335 YDFIIVGAGTAGSALAARLSEVANFSVLLLEAGGDP---PIEAIIPAFRETLKASSVDWN 505
           YD+I+VG GTAG  LAA L+      VL+LE GG P   P  A    F  TL  +     
Sbjct: 55  YDYIVVGGGTAGCPLAATLAGPGGGRVLVLERGGAPAEFPPLATAGGFVRTLAMAD---- 110

Query: 506 FTSVENNITSQ--ALKRGIEQQPRGKMLGGSGSLNHMVYARGFPSDYHEWASIAGETWNW 679
             + E++  +Q  A + G+    R ++LGG+ S+N   Y+R  P D+       GE  NW
Sbjct: 111 -PAPESDAPAQTFASEDGV-PNVRARVLGGATSINAGFYSRAHP-DWFRSHGEGGEAMNW 167


>04_04_0862 +
           28843654-28844386,28844486-28844895,28844995-28845560,
           28845737-28845803
          Length = 591

 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 44/113 (38%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
 Frame = +2

Query: 296 TWPKDSVLQ-NGSRYDFIIVGAGTAGSALAARLSEVANFSVLLLEAGGDP-PIEAI--IP 463
           T+ KD+V     S YD+IIVG GTAG  LAA LS+   F VLLLE GG P   E I  + 
Sbjct: 35  TFMKDAVQSPQVSYYDYIIVGGGTAGCPLAATLSQ--RFRVLLLERGGSPYDDERIGNMT 92

Query: 464 AFRETLKASSVDWNFTSVENNITSQALKRGIEQQPRGKMLGGSGSLNHMVYAR 622
            F +TL  +S     +  +  ++   +   I  +PR  +LGG   +N   Y R
Sbjct: 93  RFADTLSDTSPS---SPAQRFVSEDGV---INSRPR--VLGGGSCINAGFYTR 137


>08_02_0598 -
           19149218-19149524,19150325-19150896,19151374-19151762,
           19151850-19152163,19152312-19152356,19153451-19153805,
           19154361-19154430
          Length = 683

 Score = 50.0 bits (114), Expect = 3e-06
 Identities = 40/100 (40%), Positives = 49/100 (49%)
 Frame = +2

Query: 335 YDFIIVGAGTAGSALAARLSEVANFSVLLLEAGGDPPIEAIIPAFRETLKASSVDWNFTS 514
           YD+IIVG GTAG  LAA LS+   + VLLLE GG P     I +  E       D +  S
Sbjct: 50  YDYIIVGGGTAGCPLAATLSQ--KYKVLLLERGGSPYGNRNI-SHLENFHICLADDSPNS 106

Query: 515 VENNITSQALKRGIEQQPRGKMLGGSGSLNHMVYARGFPS 634
                 S     G+    R K+LGG  S+N   Y+R  PS
Sbjct: 107 PSQGFIS---TDGV-INARAKVLGGGTSVNAGFYSRADPS 142


>02_05_0304 +
           27721413-27721479,27721561-27722208,27722399-27723371,
           27724196-27724237,27724379-27724466,27724911-27725016,
           27726499-27726614
          Length = 679

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 36/99 (36%), Positives = 48/99 (48%)
 Frame = +2

Query: 335 YDFIIVGAGTAGSALAARLSEVANFSVLLLEAGGDPPIEAIIPAFRETLKASSVDWNFTS 514
           YD+II+G GTAG  LAA LSE   + VLLLE GG P  +A +          + D +  S
Sbjct: 43  YDYIIIGGGTAGCPLAATLSE--RYRVLLLERGGSPYDDARVLNMAHFADVLA-DTSGAS 99

Query: 515 VENNITSQALKRGIEQQPRGKMLGGSGSLNHMVYARGFP 631
                 S+     I  +PR  +LGG   +N   + R  P
Sbjct: 100 PSQRFVSE--DGVINARPR--VLGGGSCINAGFFTRAGP 134


>09_03_0047 -
           11867302-11867356,11867461-11868032,11868485-11868873,
           11869018-11869331,11871028-11871382,11872004-11872076
          Length = 585

 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 22/36 (61%), Positives = 25/36 (69%)
 Frame = +2

Query: 335 YDFIIVGAGTAGSALAARLSEVANFSVLLLEAGGDP 442
           YD+I+VG GTAG  LAA LS    + VLLLE GG P
Sbjct: 51  YDYIVVGGGTAGCPLAATLS--LKYKVLLLERGGSP 84


>10_08_0682 +
           19858131-19858230,19858313-19858954,19859041-19860016,
           19860105-19860147
          Length = 586

 Score = 41.5 bits (93), Expect = 9e-04
 Identities = 22/38 (57%), Positives = 27/38 (71%)
 Frame = +2

Query: 329 SRYDFIIVGAGTAGSALAARLSEVANFSVLLLEAGGDP 442
           S Y++I++G GTAG  LAA LSE  +  VLLLE GG P
Sbjct: 52  SSYNYIVIGGGTAGCPLAATLSE--HSRVLLLERGGLP 87


>03_01_0127 +
           988066-988171,988259-988881,988986-989396,989463-990037,
           990137-990194
          Length = 590

 Score = 41.5 bits (93), Expect = 9e-04
 Identities = 23/38 (60%), Positives = 27/38 (71%)
 Frame = +2

Query: 329 SRYDFIIVGAGTAGSALAARLSEVANFSVLLLEAGGDP 442
           S Y++I+VG GTAG  LAA LSE +   VLLLE GG P
Sbjct: 55  SYYNYIVVGGGTAGCPLAATLSERSR--VLLLERGGLP 90


>12_02_1218 -
           27088206-27088214,27088577-27088643,27088755-27088821,
           27088934-27089054,27089272-27089351,27089574-27089686,
           27090305-27090420,27090507-27090575,27090684-27090758,
           27090836-27090880,27091100-27091187,27091488-27091570,
           27091655-27091705,27091848-27091905,27092019-27092201,
           27092385-27092546,27092713-27093029
          Length = 567

 Score = 34.7 bits (76), Expect = 0.10
 Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
 Frame = +2

Query: 302 PKDSVLQNGSRYDFIIVGAGTAGSALAARLSEVANFSVLLLE----AGGDPPIEA-IIPA 466
           P+  +L  G R+D +++G G  G A AA L+  A  SV +LE     GG    E+ ++P 
Sbjct: 29  PQQQLLPKGKRWDAVVIGGGHNGLAAAAYLAR-AGRSVAVLERRGVIGGAAVSESDLVPG 87

Query: 467 FR 472
           FR
Sbjct: 88  FR 89


>07_03_1216 +
           24940426-24940714,24940800-24940877,24941954-24942129,
           24942298-24942492
          Length = 245

 Score = 33.1 bits (72), Expect = 0.31
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +3

Query: 354 VPVPLALRSPPDSPRLPTS 410
           VP PL+LRSPP +P LPTS
Sbjct: 16  VPSPLSLRSPPKTPFLPTS 34


>05_05_0016 -
           21542300-21542886,21542956-21543286,21543310-21543419,
           21543526-21544069,21544190-21544345
          Length = 575

 Score = 32.7 bits (71), Expect = 0.42
 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +1

Query: 424 GGGRRSTDRGYYTSVQRNSK--SKFGRLEFYQRGK 522
           GG   + D  Y+ S+ R +K  SKFGRL FY   K
Sbjct: 80  GGNPHAEDFAYFHSISRYTKQNSKFGRLNFYPHSK 114


>02_03_0350 + 18027932-18028125,18028185-18028270,18028889-18028980
          Length = 123

 Score = 32.7 bits (71), Expect = 0.42
 Identities = 24/82 (29%), Positives = 34/82 (41%)
 Frame = +1

Query: 373 CARRQTLRGCQLQRTPTGGGRRSTDRGYYTSVQRNSKSKFGRLEFYQRGKQYYKPSLKKR 552
           CA + T+RG +  R+ T  G R + RG + S    + S+ GR                  
Sbjct: 24  CAAQPTVRGRRQWRSATMRGWRDSRRGAHASSSGGASSESGRWASNLGLAAGPSDGAVAV 83

Query: 553 NRATTSREDAGWKRLLESHGLC 618
                 RED G+  L ES G+C
Sbjct: 84  GALNGVREDDGYGTLFESSGVC 105


>03_02_0259 -
           6920472-6920579,6920744-6921022,6921115-6921390,
           6921473-6921691,6921795-6921963,6922248-6922422,
           6922490-6922601,6923343-6923573
          Length = 522

 Score = 32.3 bits (70), Expect = 0.55
 Identities = 15/24 (62%), Positives = 17/24 (70%)
 Frame = +2

Query: 326 GSRYDFIIVGAGTAGSALAARLSE 397
           G R D +IVGAG AGSALA  L +
Sbjct: 54  GDRTDIVIVGAGVAGSALAYTLGK 77


>10_08_0628 +
           19389508-19389637,19389774-19389850,19390332-19390438,
           19390545-19390626,19390702-19390814,19391023-19391086,
           19391192-19391266,19391691-19391807,19392131-19392199,
           19392319-19392411,19392733-19392835,19393040-19393164,
           19393317-19393366,19393477-19393543,19393663-19393742,
           19394038-19394166,19394274-19394340,19394429-19394512
          Length = 543

 Score = 31.9 bits (69), Expect = 0.73
 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
 Frame = +2

Query: 335 YDFIIVGAGTAGSALAARLSEV-----ANFSVLLLEAGGD 439
           YD ++VGAG AG A A RL ++      + SV +LE G +
Sbjct: 3   YDVVVVGAGPAGLAAAIRLKQLCRDADTDLSVCVLEKGSE 42


>04_04_1481 - 33894175-33894537,33894618-33894739,33894841-33895225
          Length = 289

 Score = 31.5 bits (68), Expect = 0.96
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +2

Query: 581 LGGSGSLNHMVYARGFPSDYHEWASIAGETWNWT 682
           +GG G+  H V+  GFPS++  W S A  ++  T
Sbjct: 208 VGGDGAHRHAVHG-GFPSNFQRWGSAAATSYTIT 240


>09_03_0076 - 12120900-12121183,12123083-12123188
          Length = 129

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +2

Query: 311 SVLQNGSRYDFIIVGAGTAGSALAARLSEVANFSVLLLEA 430
           S++    R   II+GAG +G +   RLSE     +L+LEA
Sbjct: 17  SLVAGTGRPRVIIIGAGISGISAGKRLSEAGITDILILEA 56


>09_04_0617 - 18981258-18981949,18983869-18984427
          Length = 416

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = +2

Query: 320 QNGSRYDFIIVGAGTAGSALAARLSEVANFSVLLLE 427
           + G  +D I+VGAG  GS  A   S      VLLLE
Sbjct: 10  EGGDGFDVIVVGAGIMGSCAAYAASTRGGARVLLLE 45


>04_04_1545 -
           34278266-34278586,34278685-34279114,34279225-34279322,
           34279415-34279517,34279609-34279694,34279778-34279865,
           34279950-34280063,34280147-34280235,34280369-34280484,
           34280906-34280951
          Length = 496

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 17/37 (45%), Positives = 22/37 (59%)
 Frame = +2

Query: 320 QNGSRYDFIIVGAGTAGSALAARLSEVANFSVLLLEA 430
           QN S    I++G G +G A A  LS  A+F V LLE+
Sbjct: 25  QNASPPSVIVIGGGISGIAAARALSN-ASFKVTLLES 60


>03_02_0260 -
           6924532-6924757,6925443-6925546,6925729-6926007,
           6926093-6926368,6926460-6926678,6926758-6926926,
           6927208-6927382,6927489-6927600,6929566-6929820
          Length = 604

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = +2

Query: 332 RYDFIIVGAGTAGSALAARLSE 397
           R D I+VGAG AGSALA  L +
Sbjct: 64  RTDVIVVGAGVAGSALAYTLGK 85


>11_06_0192 +
           21128298-21128829,21129341-21129407,21131169-21131211,
           21131301-21131367,21131613-21131770,21131863-21132057
          Length = 353

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = -2

Query: 576 FPRGCCSIPLFKAWLVILFSTLVKFQSTELAFRVSLNAGIIASI 445
           FP G   + ++     +LFS  + F + +L  R + N  +IA+I
Sbjct: 292 FPLGRAGMTIYGCLATVLFSAFIVFDTNQLIKRHTYNEYVIAAI 335


>12_02_0499 -
           19725896-19726339,19726918-19726960,19727286-19727389,
           19727784-19728539
          Length = 448

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = +3

Query: 318 CKMALDTTSSSWVPVPLALR--SPPDSPRLPTSAYSYWRRAEIHR*RLL 458
           C+      SS  +P+ LALR   PP  P LP SA    R   +HR R L
Sbjct: 41  CRRLAAAASSPSLPLALALRLGLPPPRPLLPASAARLLR--SLHRLRRL 87


>09_03_0073 -
           12092566-12092645,12092788-12092869,12092979-12093236,
           12093314-12093463,12093581-12093724,12093744-12094077,
           12094639-12094785,12097446-12097695,12100511-12100616
          Length = 516

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +2

Query: 311 SVLQNGSRYDFIIVGAGTAGSALAARLSEVANFSVLLLEA 430
           S++    R   IIVGAG +G +   R+ E     VL+LEA
Sbjct: 17  SLVAGTGRPRVIIVGAGISGISAGKRIWEAGIADVLILEA 56


>02_01_0012 -
           80014-80104,80190-80308,80480-80524,80726-80911,
           81027-81101,81213-81304,81731-81803,81923-82004,
           82096-82217,82249-82440,82682-82804
          Length = 399

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
 Frame = +2

Query: 347 IVGAGTAGSALAARLSEVANFSVLLLEAGGDPPIEAIIPAFRETLKASS---VDWNFTSV 517
           ++GAG  GSA A  + E    +++  +      +E  + A+ + LKA+    V W   + 
Sbjct: 159 VIGAGRIGSAYARMMIEGFKMNLIYYDLYQSTRLEKFVTAYGQFLKANGEQPVTWKRAAT 218

Query: 518 ENNITSQA 541
             ++  +A
Sbjct: 219 MEDVLREA 226


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,157,959
Number of Sequences: 37544
Number of extensions: 590184
Number of successful extensions: 1809
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1803
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)