Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_K02
(802 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 36 0.026
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 36 0.026
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 27 0.24
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 27 0.25
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.31
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.31
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.31
AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical ... 32 0.42
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 32 0.42
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 0.54
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 27 1.2
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.3
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.3
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 31 1.3
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 30 1.7
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 1.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 1.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 1.7
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 30 1.7
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 30 1.7
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 30 2.2
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 30 2.2
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 30 2.2
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 30 2.2
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 29 2.9
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 29 2.9
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 2.9
M93256-1|AAB59181.1| 1110|Caenorhabditis elegans tra-1 protein. 24 3.3
AL117202-5|CAB61040.2| 1109|Caenorhabditis elegans Hypothetical ... 24 3.3
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 29 3.9
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 3.9
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 5.1
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 5.1
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 5.1
Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical pr... 24 5.7
AC006611-4|AAK85456.2| 328|Caenorhabditis elegans Hypothetical ... 28 6.8
Z81125-3|CAB03384.1| 790|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z81082-3|CAB03095.2| 603|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 28 8.9
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 8.9
AL110501-9|CAB54507.2| 802|Caenorhabditis elegans Hypothetical ... 28 8.9
AL033514-40|CAD36501.1| 802|Caenorhabditis elegans Hypothetical... 28 8.9
AJ319870-1|CAC67459.1| 802|Caenorhabditis elegans ZYG-8 protein... 28 8.9
AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily a... 28 8.9
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 36.3 bits (80), Expect = 0.026
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +2
Query: 683 PPPPPPPPXXXGGXGXXXXXXXKXXPPPPP 772
PPPPPPPP G PPPPP
Sbjct: 609 PPPPPPPPPQSFGMAPISSAAPPPPPPPPP 638
Score = 31.9 bits (69), Expect = 0.55
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +2
Query: 683 PPPPPPPPXXXGGXGXXXXXXXKXXPPPPP 772
PPPPPPPP G PPPPP
Sbjct: 631 PPPPPPPPMGLPAVG---AGAPPPPPPPPP 657
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 686 PPPPPPPXXXGGXGXXXXXXXKXXPPPP 769
PPPPPPP G PPPP
Sbjct: 630 PPPPPPPPPMGLPAVGAGAPPPPPPPPP 657
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +2
Query: 683 PPPPPPPPXXXGG 721
PPPPPPPP GG
Sbjct: 650 PPPPPPPPSGAGG 662
Score = 27.9 bits (59), Expect = 8.9
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 683 PPPPPPPPXXXGG 721
PPPPPPPP G
Sbjct: 649 PPPPPPPPPSGAG 661
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 36.3 bits (80), Expect = 0.026
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +2
Query: 683 PPPPPPPPXXXGGXGXXXXXXXKXXPPPPP 772
PPPPPPPP G PPPPP
Sbjct: 435 PPPPPPPPPQSFGMAPISSAAPPPPPPPPP 464
Score = 31.9 bits (69), Expect = 0.55
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +2
Query: 683 PPPPPPPPXXXGGXGXXXXXXXKXXPPPPP 772
PPPPPPPP G PPPPP
Sbjct: 457 PPPPPPPPMGLPAVG---AGAPPPPPPPPP 483
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 686 PPPPPPPXXXGGXGXXXXXXXKXXPPPP 769
PPPPPPP G PPPP
Sbjct: 456 PPPPPPPPPMGLPAVGAGAPPPPPPPPP 483
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +2
Query: 683 PPPPPPPPXXXGG 721
PPPPPPPP GG
Sbjct: 476 PPPPPPPPSGAGG 488
Score = 27.9 bits (59), Expect = 8.9
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 683 PPPPPPPPXXXGG 721
PPPPPPPP G
Sbjct: 475 PPPPPPPPPSGAG 487
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 26.6 bits (56), Expect(2) = 0.24
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 683 PPPPPPPP 706
PPPPPPPP
Sbjct: 765 PPPPPPPP 772
Score = 26.6 bits (56), Expect(2) = 0.32
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 683 PPPPPPPP 706
PPPPPPPP
Sbjct: 766 PPPPPPPP 773
Score = 25.0 bits (52), Expect(2) = 0.24
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2
Query: 686 PPPPPPPXXXG 718
PPPPPPP G
Sbjct: 808 PPPPPPPPPGG 818
Score = 24.6 bits (51), Expect(2) = 0.32
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2
Query: 689 PPPPPPXXXGG 721
PPPPPP GG
Sbjct: 808 PPPPPPPPPGG 818
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 26.6 bits (56), Expect(2) = 0.25
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 683 PPPPPPPP 706
PPPPPPPP
Sbjct: 765 PPPPPPPP 772
Score = 26.6 bits (56), Expect(2) = 0.32
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 683 PPPPPPPP 706
PPPPPPPP
Sbjct: 766 PPPPPPPP 773
Score = 25.0 bits (52), Expect(2) = 0.25
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2
Query: 686 PPPPPPPXXXG 718
PPPPPPP G
Sbjct: 808 PPPPPPPPPGG 818
Score = 24.6 bits (51), Expect(2) = 0.32
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2
Query: 689 PPPPPPXXXGG 721
PPPPPP GG
Sbjct: 808 PPPPPPPPPGG 818
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.31
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Frame = +2
Query: 683 PPPPPPP---PXXXGGXGXXXXXXXKXXPPPPP 772
PPPPPPP P GG PPPPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 684 PPPPPPXXXXXGXXXXPXXXXXKXXPPPP 770
PPPPPP P K PPPP
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.31
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Frame = +2
Query: 683 PPPPPPP---PXXXGGXGXXXXXXXKXXPPPPP 772
PPPPPPP P GG PPPPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 684 PPPPPPXXXXXGXXXXPXXXXXKXXPPPP 770
PPPPPP P K PPPP
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.31
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Frame = +2
Query: 683 PPPPPPP---PXXXGGXGXXXXXXXKXXPPPPP 772
PPPPPPP P GG PPPPP
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 357
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 684 PPPPPPXXXXXGXXXXPXXXXXKXXPPPP 770
PPPPPP P K PPPP
Sbjct: 342 PPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
>AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical
protein F56E10.2 protein.
Length = 813
Score = 32.3 bits (70), Expect = 0.42
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 683 PPPPPPPPXXXGGXGXXXXXXXKXXPPPP 769
PP PPPPP GG K P PP
Sbjct: 328 PPAPPPPPPPIGGLTSPPKDALKNVPEPP 356
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 32.3 bits (70), Expect = 0.42
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = +2
Query: 683 PPPPPPPPXXXGGXGXXXXXXXKXXPPPPP 772
PPPPPPPP GG PPPPP
Sbjct: 576 PPPPPPPPPMLGG---------PPPPPPPP 596
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 6/36 (16%)
Frame = +2
Query: 683 PPPP------PPPPXXXGGXGXXXXXXXKXXPPPPP 772
PPPP PPPP GG PPPPP
Sbjct: 85 PPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPP 120
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 4/37 (10%)
Frame = +2
Query: 674 FXXPPPPP----PPPXXXGGXGXXXXXXXKXXPPPPP 772
F PPP P PPP GG PPPPP
Sbjct: 63 FFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPP 99
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 5/37 (13%)
Frame = +2
Query: 674 FXXPPP-----PPPPPXXXGGXGXXXXXXXKXXPPPP 769
F PPP PPPPP GG PPPP
Sbjct: 73 FIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPP 109
Score = 25.4 bits (53), Expect(2) = 0.54
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 674 FXXPPPPPPP 703
F PPPPPPP
Sbjct: 111 FGAPPPPPPP 120
Score = 25.0 bits (52), Expect(2) = 0.54
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2
Query: 686 PPPPPPPXXXG 718
PPPPPPP G
Sbjct: 114 PPPPPPPSGLG 124
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 26.6 bits (56), Expect(2) = 1.2
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 683 PPPPPPPP 706
PPPPPPPP
Sbjct: 358 PPPPPPPP 365
Score = 22.6 bits (46), Expect(2) = 1.2
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 674 FXXPPPPPP 700
F PPPPPP
Sbjct: 321 FILPPPPPP 329
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +2
Query: 683 PPPPPPPPXXXGGXGXXXXXXXKXXPPPPP 772
PPPPPPPP G PPPPP
Sbjct: 297 PPPPPPPPGRTPG-----PPGMPGMPPPPP 321
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 689 PPPPPPXXXGGXGXXXXXXXKXXPPPPP 772
PPPPPP G G PPPPP
Sbjct: 317 PPPPPPSRFGPPGMGG-----MPPPPPP 339
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 686 PPPPPPPXXXGGXGXXXXXXXKXXPPPP 769
PPPPPP G G P PP
Sbjct: 348 PPPPPPRYPSAGPGMYPPPPPSRPPAPP 375
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +2
Query: 683 PPPPPPPPXXXGGXGXXXXXXXKXXPPPPP 772
PPPPPPPP G PPPPP
Sbjct: 307 PPPPPPPPGRTPG-----PPGMPGMPPPPP 331
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 689 PPPPPPXXXGGXGXXXXXXXKXXPPPPP 772
PPPPPP G G PPPPP
Sbjct: 327 PPPPPPSRFGPPGMGG-----MPPPPPP 349
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 686 PPPPPPPXXXGGXGXXXXXXXKXXPPPP 769
PPPPPP G G P PP
Sbjct: 358 PPPPPPRYPSAGPGMYPPPPPSRPPAPP 385
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +2
Query: 683 PPPPPPPPXXXGGXGXXXXXXXKXXPP 763
P PPPPPP GG G + PP
Sbjct: 152 PLPPPPPPPLMGGSGGHWRSGGERGPP 178
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +2
Query: 683 PPPPPPPPXXXGGXGXXXXXXXKXXPPPPP 772
PPPPPPPP G + PPPPP
Sbjct: 39 PPPPPPPPCGGG---------YEAPPPPPP 59
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Frame = +2
Query: 683 PPPPP---PPPXXXGGXGXXXXXXXKXXPPPPP 772
PPPPP PPP GG PPPPP
Sbjct: 272 PPPPPTGSPPPPPAGG-SPPPPRAGSPPPPPPP 303
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 2/31 (6%)
Frame = +2
Query: 683 PPPPPPP--PXXXGGXGXXXXXXXKXXPPPP 769
PPPPPPP G G PPPP
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPP 267
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Frame = +2
Query: 683 PPPPP---PPPXXXGGXGXXXXXXXKXXPPPPP 772
PPPPP PPP GG PPPPP
Sbjct: 293 PPPPPTGSPPPPPAGG-SPPPPRAGSPPPPPPP 324
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 2/31 (6%)
Frame = +2
Query: 683 PPPPPPP--PXXXGGXGXXXXXXXKXXPPPP 769
PPPPPPP G G PPPP
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPP 288
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Frame = +2
Query: 683 PPPPP---PPPXXXGGXGXXXXXXXKXXPPPPP 772
PPPPP PPP GG PPPPP
Sbjct: 278 PPPPPTGSPPPPPAGG-SPPPPRAGSPPPPPPP 309
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 2/31 (6%)
Frame = +2
Query: 683 PPPPPPP--PXXXGGXGXXXXXXXKXXPPPP 769
PPPPPPP G G PPPP
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPP 273
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +2
Query: 683 PPPPPPPPXXXGG 721
PPPPPPPP GG
Sbjct: 63 PPPPPPPPAPIGG 75
Score = 29.1 bits (62), Expect = 3.9
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 683 PPPPPPPPXXXGGXG 727
PPPPPPP GG G
Sbjct: 64 PPPPPPPAPIGGGAG 78
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +2
Query: 683 PPPPPPPPXXXGG 721
PPPPPPPP GG
Sbjct: 63 PPPPPPPPAPIGG 75
Score = 29.1 bits (62), Expect = 3.9
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 683 PPPPPPPPXXXGGXG 727
PPPPPPP GG G
Sbjct: 64 PPPPPPPAPIGGGAG 78
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 29.9 bits (64), Expect = 2.2
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 683 PPPPPPPPXXXGGXG 727
PPPPPPPP G G
Sbjct: 534 PPPPPPPPRSSGANG 548
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +2
Query: 683 PPPPPPPPXXXGGXGXXXXXXXKXXPPPPP 772
PPPPPPPP + PPPPP
Sbjct: 26 PPPPPPPP-KPAPYVEQSAQPQQTAPPPPP 54
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +2
Query: 683 PPPPPPPPXXXGGXGXXXXXXXKXXPPPPP 772
PPPPPPPP K PPPPP
Sbjct: 155 PPPPPPPP-------PVSVPSSKPTPPPPP 177
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +2
Query: 683 PPPPPPPPXXXGGXGXXXXXXXKXXPPPPP 772
PPPPPPPP K PPPPP
Sbjct: 155 PPPPPPPP-------PVSVPSSKPTPPPPP 177
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 29.5 bits (63), Expect = 2.9
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 686 PPPPPPPXXXGGXG 727
PPPPPPP GG G
Sbjct: 65 PPPPPPPPAFGGLG 78
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 29.5 bits (63), Expect = 2.9
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 686 PPPPPPPXXXGGXG 727
PPPPPPP GG G
Sbjct: 65 PPPPPPPPAFGGLG 78
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 29.5 bits (63), Expect = 2.9
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 686 PPPPPPPXXXGGXG 727
PPPPPPP GG G
Sbjct: 65 PPPPPPPPAFGGLG 78
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 683 PPPPPPPPXXXGGXGXXXXXXXKXXPPPPP 772
PPPPPPPP PPPPP
Sbjct: 67 PPPPPPPPPL---ISILQQAPPPPPPPPPP 93
>M93256-1|AAB59181.1| 1110|Caenorhabditis elegans tra-1 protein.
Length = 1110
Score = 24.2 bits (50), Expect(2) = 3.3
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2
Query: 674 FXXPPPPPPP 703
+ PPPPPPP
Sbjct: 1075 YALPPPPPPP 1084
Score = 23.4 bits (48), Expect(2) = 3.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 683 PPPPPPPP 706
PPPPP PP
Sbjct: 1080 PPPPPAPP 1087
>AL117202-5|CAB61040.2| 1109|Caenorhabditis elegans Hypothetical
protein Y47D3A.6a protein.
Length = 1109
Score = 24.2 bits (50), Expect(2) = 3.3
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2
Query: 674 FXXPPPPPPP 703
+ PPPPPPP
Sbjct: 1074 YALPPPPPPP 1083
Score = 23.4 bits (48), Expect(2) = 3.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 683 PPPPPPPP 706
PPPPP PP
Sbjct: 1079 PPPPPAPP 1086
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 29.1 bits (62), Expect = 3.9
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 683 PPPPPPPPXXXGGXG 727
PPPPPP P GG G
Sbjct: 31 PPPPPPSPCGCGGGG 45
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 683 PPPPPPPPXXXGGXGXXXXXXXKXXPPPPP 772
PPPPPPPP PPPPP
Sbjct: 1338 PPPPPPPPPPPS----DDLTPVPPPPPPPP 1363
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 683 PPPPPPPPXXXGGXG 727
PPPPPPPP G G
Sbjct: 51 PPPPPPPPPPMCGCG 65
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 683 PPPPPPPPXXXGGXG 727
PPPPPPPP G G
Sbjct: 53 PPPPPPPPMCGCGCG 67
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 683 PPPPPPPPXXXGGXGXXXXXXXKXXPPPP 769
PPPPPPPP G PPPP
Sbjct: 674 PPPPPPPPM----PGDLSSLLAAAPPPPP 698
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 683 PPPPPPPPXXXGGXGXXXXXXXKXXPPPP 769
PPPPPPPP G PPPP
Sbjct: 674 PPPPPPPPM----PGDLSSLLAAAPPPPP 698
>Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical
protein B0285.1 protein.
Length = 730
Score = 24.2 bits (50), Expect(2) = 5.7
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2
Query: 674 FXXPPPPPPPP 706
F PPPPP PP
Sbjct: 203 FSQPPPPPLPP 213
Score = 22.6 bits (46), Expect(2) = 5.7
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = +2
Query: 692 PPPPPXXXGGXGXXXXXXXKXXPP 763
PPPPP GG PP
Sbjct: 252 PPPPPQTDGGASSSKRQDPLPMPP 275
>AC006611-4|AAK85456.2| 328|Caenorhabditis elegans Hypothetical
protein C30F8.3 protein.
Length = 328
Score = 28.3 bits (60), Expect = 6.8
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2
Query: 674 FXXPPPPPPPP 706
F PPPPPPPP
Sbjct: 70 FTQPPPPPPPP 80
>Z81125-3|CAB03384.1| 790|Caenorhabditis elegans Hypothetical
protein T22A3.5 protein.
Length = 790
Score = 24.6 bits (51), Expect(2) = 7.3
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 683 PPPPPPPPXXXG 718
PPPPPP P G
Sbjct: 751 PPPPPPQPMEYG 762
Score = 21.8 bits (44), Expect(2) = 7.3
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +2
Query: 674 FXXPPPPPPPP 706
F PPPPPP
Sbjct: 745 FSTSAPPPPPP 755
>Z81082-3|CAB03095.2| 603|Caenorhabditis elegans Hypothetical
protein F42G4.3a protein.
Length = 603
Score = 27.9 bits (59), Expect = 8.9
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 683 PPPPPPPPXXXGG 721
PPPPPPPP G
Sbjct: 4 PPPPPPPPLLPSG 16
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 2/32 (6%)
Frame = +2
Query: 683 PPPPPPPPXXX--GGXGXXXXXXXKXXPPPPP 772
PPPPPP P G PPPPP
Sbjct: 551 PPPPPPLPLDLLKGAVAGLKSVPGGPPPPPPP 582
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 683 PPPPPPPPXXXGGXGXXXXXXXKXXPPPPP 772
PPPPPPP G PPPPP
Sbjct: 122 PPPPPPPRKSRAGGS-------SPPPPPPP 144
>AL110501-9|CAB54507.2| 802|Caenorhabditis elegans Hypothetical
protein Y79H2A.11 protein.
Length = 802
Score = 27.9 bits (59), Expect = 8.9
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 683 PPPPPPPPXXXGG 721
PPPPPPPP G
Sbjct: 16 PPPPPPPPGSEAG 28
>AL033514-40|CAD36501.1| 802|Caenorhabditis elegans Hypothetical
protein Y79H2A.11 protein.
Length = 802
Score = 27.9 bits (59), Expect = 8.9
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 683 PPPPPPPPXXXGG 721
PPPPPPPP G
Sbjct: 16 PPPPPPPPGSEAG 28
>AJ319870-1|CAC67459.1| 802|Caenorhabditis elegans ZYG-8 protein
protein.
Length = 802
Score = 27.9 bits (59), Expect = 8.9
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 683 PPPPPPPPXXXGG 721
PPPPPPPP G
Sbjct: 16 PPPPPPPPGSEAG 28
>AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily
assigned gene nameprotein 168 protein.
Length = 1347
Score = 27.9 bits (59), Expect = 8.9
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 683 PPPPPPPPXXXG 718
PPPPPPPP G
Sbjct: 540 PPPPPPPPTQIG 551
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,744,070
Number of Sequences: 27780
Number of extensions: 287144
Number of successful extensions: 4328
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1885
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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