Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_K01
(931 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0364 - 2856598-2857059 64 2e-10
03_02_0560 + 9462996-9463454 63 3e-10
01_06_1288 - 36007432-36007851 63 3e-10
05_07_0203 + 28391707-28392165 62 5e-10
01_01_0366 + 2871188-2871655 62 5e-10
08_02_1090 + 24254172-24254624 61 1e-09
01_01_0360 - 2837046-2837507 61 1e-09
05_05_0111 + 22479971-22480093,22480238-22480471 61 1e-09
01_01_0362 - 2843659-2844468,2844669-2844699,2844824-2844903,284... 60 2e-09
01_01_0358 - 2819235-2819696 60 2e-09
01_01_0331 + 2685802-2686263 60 2e-09
01_01_0329 + 2673479-2673940 60 2e-09
09_06_0354 - 22490833-22491417 56 3e-08
08_02_1089 + 24250953-24251123 56 5e-08
>01_01_0364 - 2856598-2857059
Length = 153
Score = 63.7 bits (148), Expect = 2e-10
Identities = 29/51 (56%), Positives = 40/51 (78%)
Frame = +3
Query: 72 EKIAVEAGRLVAHGKKNTLGSREIQSAVKLLVPGELATHANSEGMKAISMY 224
EK+A EA +L + KK T+ SREIQ+AV+L++PGELA HA SEG KA++ +
Sbjct: 100 EKLAAEAAKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKF 150
>03_02_0560 + 9462996-9463454
Length = 152
Score = 62.9 bits (146), Expect = 3e-10
Identities = 29/51 (56%), Positives = 40/51 (78%)
Frame = +3
Query: 72 EKIAVEAGRLVAHGKKNTLGSREIQSAVKLLVPGELATHANSEGMKAISMY 224
EK+A EA RL + KK T+ SREIQ++V+L++PGELA HA SEG KA++ +
Sbjct: 99 EKLAQEAARLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKF 149
>01_06_1288 - 36007432-36007851
Length = 139
Score = 62.9 bits (146), Expect = 3e-10
Identities = 29/51 (56%), Positives = 40/51 (78%)
Frame = +3
Query: 72 EKIAVEAGRLVAHGKKNTLGSREIQSAVKLLVPGELATHANSEGMKAISMY 224
EK+A EA RL + KK T+ SREIQ++V+L++PGELA HA SEG KA++ +
Sbjct: 86 EKLAQEAARLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKF 136
>05_07_0203 + 28391707-28392165
Length = 152
Score = 62.5 bits (145), Expect = 5e-10
Identities = 28/51 (54%), Positives = 40/51 (78%)
Frame = +3
Query: 72 EKIAVEAGRLVAHGKKNTLGSREIQSAVKLLVPGELATHANSEGMKAISMY 224
EK+A EA +L + KK T+ SREIQ++V+L++PGELA HA SEG KA++ +
Sbjct: 99 EKLAAEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKF 149
>01_01_0366 + 2871188-2871655
Length = 155
Score = 62.5 bits (145), Expect = 5e-10
Identities = 28/51 (54%), Positives = 40/51 (78%)
Frame = +3
Query: 72 EKIAVEAGRLVAHGKKNTLGSREIQSAVKLLVPGELATHANSEGMKAISMY 224
EK+A EA +L + KK T+ SREIQ++V+L++PGELA HA SEG KA++ +
Sbjct: 102 EKLAAEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKF 152
>08_02_1090 + 24254172-24254624
Length = 150
Score = 61.3 bits (142), Expect = 1e-09
Identities = 28/51 (54%), Positives = 40/51 (78%)
Frame = +3
Query: 72 EKIAVEAGRLVAHGKKNTLGSREIQSAVKLLVPGELATHANSEGMKAISMY 224
EK+A EA +L + KK T+ SREIQ++V+L++PGELA HA SEG KA++ +
Sbjct: 97 EKLAGEAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKF 147
>01_01_0360 - 2837046-2837507
Length = 153
Score = 61.3 bits (142), Expect = 1e-09
Identities = 28/51 (54%), Positives = 40/51 (78%)
Frame = +3
Query: 72 EKIAVEAGRLVAHGKKNTLGSREIQSAVKLLVPGELATHANSEGMKAISMY 224
EK+A E+ +L + KK T+ SREIQ+AV+L++PGELA HA SEG KA++ +
Sbjct: 100 EKLAGESAKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKF 150
>05_05_0111 + 22479971-22480093,22480238-22480471
Length = 118
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/51 (54%), Positives = 39/51 (76%)
Frame = +3
Query: 72 EKIAVEAGRLVAHGKKNTLGSREIQSAVKLLVPGELATHANSEGMKAISMY 224
EK+ EA RL + KK T+ SREIQ++V+L++PGELA HA SEG KA++ +
Sbjct: 65 EKLEQEAARLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKF 115
>01_01_0362 -
2843659-2844468,2844669-2844699,2844824-2844903,
2846680-2847831
Length = 690
Score = 60.1 bits (139), Expect = 2e-09
Identities = 27/51 (52%), Positives = 40/51 (78%)
Frame = +3
Query: 72 EKIAVEAGRLVAHGKKNTLGSREIQSAVKLLVPGELATHANSEGMKAISMY 224
EK+A E+ +L + KK T+ SREIQ++V+L++PGELA HA SEG KA++ +
Sbjct: 637 EKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKF 687
>01_01_0358 - 2819235-2819696
Length = 153
Score = 60.1 bits (139), Expect = 2e-09
Identities = 27/51 (52%), Positives = 40/51 (78%)
Frame = +3
Query: 72 EKIAVEAGRLVAHGKKNTLGSREIQSAVKLLVPGELATHANSEGMKAISMY 224
EK+A E+ +L + KK T+ SREIQ++V+L++PGELA HA SEG KA++ +
Sbjct: 100 EKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKF 150
>01_01_0331 + 2685802-2686263
Length = 153
Score = 60.1 bits (139), Expect = 2e-09
Identities = 27/51 (52%), Positives = 40/51 (78%)
Frame = +3
Query: 72 EKIAVEAGRLVAHGKKNTLGSREIQSAVKLLVPGELATHANSEGMKAISMY 224
EK+A E+ +L + KK T+ SREIQ++V+L++PGELA HA SEG KA++ +
Sbjct: 100 EKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKF 150
>01_01_0329 + 2673479-2673940
Length = 153
Score = 60.1 bits (139), Expect = 2e-09
Identities = 27/51 (52%), Positives = 40/51 (78%)
Frame = +3
Query: 72 EKIAVEAGRLVAHGKKNTLGSREIQSAVKLLVPGELATHANSEGMKAISMY 224
EK+A E+ +L + KK T+ SREIQ++V+L++PGELA HA SEG KA++ +
Sbjct: 100 EKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKF 150
>09_06_0354 - 22490833-22491417
Length = 194
Score = 56.4 bits (130), Expect = 3e-08
Identities = 29/51 (56%), Positives = 37/51 (72%)
Frame = +3
Query: 72 EKIAVEAGRLVAHGKKNTLGSREIQSAVKLLVPGELATHANSEGMKAISMY 224
E++A EA RL + TL SRE+QSAV+L++P +LA HA SEG KAIS Y
Sbjct: 142 ERLADEASRLSKLSGRLTLTSREVQSAVRLVLPADLANHAISEGTKAISNY 192
>08_02_1089 + 24250953-24251123
Length = 56
Score = 55.6 bits (128), Expect = 5e-08
Identities = 26/51 (50%), Positives = 38/51 (74%)
Frame = +3
Query: 72 EKIAVEAGRLVAHGKKNTLGSREIQSAVKLLVPGELATHANSEGMKAISMY 224
EK+ EA +L + KK T+ SREIQ++V+L++ GELA HA SEG KA++ +
Sbjct: 3 EKLVGEAAKLARYNKKPTITSREIQTSVRLVLLGELAKHAVSEGAKAVTKF 53
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,236,784
Number of Sequences: 37544
Number of extensions: 244700
Number of successful extensions: 634
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 634
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2659245980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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