Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_J24
         (921 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0143 - 23091613-23092467                                         30   2.3  
12_01_0183 - 1350451-1350477,1350887-1350969,1350977-1352696,135...    29   3.9  
11_01_0183 - 1440460-1440467,1440832-1440957,1440965-1442858           29   3.9  
10_07_0062 - 12499872-12501350                                         28   9.1  
01_05_0439 - 22159425-22159520,22160137-22160345,22161028-221610...    28   9.1  

>04_04_0143 - 23091613-23092467
          Length = 284

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 20/50 (40%), Positives = 26/50 (52%)
 Frame = -3

Query: 757 QGESLRMNLISDSAMLAGVGVNTLRGISRYREVISSTFAHFSNKAQVIGG 608
           +GES    LIS++   AG G+  LR I   RE I++  A   N A V  G
Sbjct: 220 EGESESARLISEATAAAGTGLIELRRIEAARE-IAAELARSPNVAYVPAG 268


>12_01_0183 -
           1350451-1350477,1350887-1350969,1350977-1352696,
           1354258-1354428,1355892-1355939
          Length = 682

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -2

Query: 710 SGCRCEHSSRDFTIQGGHLINFCAFFKQGSSYWRIPQW 597
           S C+C H+ R+   Q G  +NF  F+  G   W +  W
Sbjct: 484 SNCQCSHNCRNRITQKGIKLNFEVFW-TGDRGWGLRSW 520


>11_01_0183 - 1440460-1440467,1440832-1440957,1440965-1442858
          Length = 675

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -2

Query: 710 SGCRCEHSSRDFTIQGGHLINFCAFFKQGSSYWRIPQW 597
           S C+C H+ R+   Q G  +NF  F+  G   W +  W
Sbjct: 469 SNCQCSHNCRNRITQKGIKLNFEVFW-TGDRGWGLRSW 505


>10_07_0062 - 12499872-12501350
          Length = 492

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = +3

Query: 642 AKVDEMTSLYREIPRR 689
           A V+E+T LYRE+PRR
Sbjct: 8   AAVEELTRLYRELPRR 23


>01_05_0439 -
           22159425-22159520,22160137-22160345,22161028-22161066,
           22161196-22161356,22161447-22161518,22162002-22162183,
           22162580-22162703,22164196-22164299,22165526-22165725,
           22165838-22166069,22166156-22166239,22166329-22166386,
           22166724-22166771,22167924-22168081,22168451-22168501,
           22168585-22168658,22168760-22168835,22169685-22169729,
           22169833-22169899,22169978-22170095,22170580-22170775,
           22171551-22171640,22171985-22172039,22172755-22172975,
           22173362-22173454,22173608-22173721,22173918-22173981,
           22174081-22174181,22174306-22174447,22174528-22174729,
           22174883-22174976,22176172-22176348
          Length = 1248

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = +2

Query: 299 IEEAKPNGALDEVF-KKYCDKSAQLKGCISSVLQGVRPCVGNEYANHINDAQNSTNQLID 475
           I+ A P+G   + F KK    + Q    +S ++Q +      +Y    N+A+ +TN L+D
Sbjct: 421 IDNASPSGFNTQAFLKKRSRATNQPVESMSMIMQFIETQGFLDYLERCNNAEENTNNLLD 480


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,254,521
Number of Sequences: 37544
Number of extensions: 422037
Number of successful extensions: 1055
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)