Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_J19
         (875 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y18448-1|CAA77176.1| 3851|Homo sapiens Bassoon protein protein.        32   2.4  
AF052224-1|AAC83555.1| 3926|Homo sapiens neuronal double zinc fi...    32   2.4  
Z93024-4|CAI18792.1| 2253|Homo sapiens polycystic kidney disease...    31   5.5  
EF517278-1|ABR22603.1| 2255|Homo sapiens PKDREJ protein.               31   5.5  
AL078611-3|CAI18766.1| 2253|Homo sapiens polycystic kidney disea...    31   5.5  
AL031034-1|CAI18795.1| 2253|Homo sapiens polycystic kidney disea...    31   5.5  
AF116458-1|AAD18021.1| 2253|Homo sapiens polycystic kidney disea...    31   5.5  

>Y18448-1|CAA77176.1| 3851|Homo sapiens Bassoon protein protein.
          Length = 3851

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 5/37 (13%)
 Frame = +1

Query: 256  GSEVRNLPEFP-----ADQAARKXPSAAADGEGXTVQ 351
            GS+  +LP+ P     A +AAR+ P +A+DGEG T Q
Sbjct: 1354 GSQTEDLPQAPSGLAAAGRAAREKPLSASDGEGGTPQ 1390


>AF052224-1|AAC83555.1| 3926|Homo sapiens neuronal double zinc finger
            protein protein.
          Length = 3926

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 5/37 (13%)
 Frame = +1

Query: 256  GSEVRNLPEFP-----ADQAARKXPSAAADGEGXTVQ 351
            GS+  +LP+ P     A +AAR+ P +A+DGEG T Q
Sbjct: 1429 GSQTEDLPQAPSGLAAAGRAAREKPLSASDGEGGTPQ 1465


>Z93024-4|CAI18792.1| 2253|Homo sapiens polycystic kidney disease
            (polycystin) and REJ homolog (sperm receptor for egg
            protein.
          Length = 2253

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +2

Query: 338  GLLXRFGSQAQAL-FXPXKTRFGSSVGIHXLRETKW 442
            GLL  +GS   AL F P + RF S++ +  L+E+ W
Sbjct: 1871 GLLHTYGSGGYALYFFPEQQRFNSTLRLKELQESNW 1906


>EF517278-1|ABR22603.1| 2255|Homo sapiens PKDREJ protein.
          Length = 2255

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +2

Query: 338  GLLXRFGSQAQAL-FXPXKTRFGSSVGIHXLRETKW 442
            GLL  +GS   AL F P + RF S++ +  L+E+ W
Sbjct: 1873 GLLHTYGSGGYALYFFPEQQRFNSTLRLKELQESNW 1908


>AL078611-3|CAI18766.1| 2253|Homo sapiens polycystic kidney disease
            (polycystin) and REJ homolog (sperm receptor for egg
            protein.
          Length = 2253

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +2

Query: 338  GLLXRFGSQAQAL-FXPXKTRFGSSVGIHXLRETKW 442
            GLL  +GS   AL F P + RF S++ +  L+E+ W
Sbjct: 1871 GLLHTYGSGGYALYFFPEQQRFNSTLRLKELQESNW 1906


>AL031034-1|CAI18795.1| 2253|Homo sapiens polycystic kidney disease
            (polycystin) and REJ homolog (sperm receptor for egg
            protein.
          Length = 2253

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +2

Query: 338  GLLXRFGSQAQAL-FXPXKTRFGSSVGIHXLRETKW 442
            GLL  +GS   AL F P + RF S++ +  L+E+ W
Sbjct: 1871 GLLHTYGSGGYALYFFPEQQRFNSTLRLKELQESNW 1906


>AF116458-1|AAD18021.1| 2253|Homo sapiens polycystic kidney disease
            and receptor for egg jelly related protein protein.
          Length = 2253

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +2

Query: 338  GLLXRFGSQAQAL-FXPXKTRFGSSVGIHXLRETKW 442
            GLL  +GS   AL F P + RF S++ +  L+E+ W
Sbjct: 1871 GLLHTYGSGGYALYFFPEQQRFNSTLRLKELQESNW 1906


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,535,687
Number of Sequences: 237096
Number of extensions: 1490744
Number of successful extensions: 2421
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2421
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)