Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_J16
         (1027 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL365445-2|CAI22836.1|  342|Homo sapiens DMRT-like family B with...    29   0.83 
AK057273-1|BAB71407.1|  342|Homo sapiens protein ( Homo sapiens ...    29   0.83 
AJ291671-1|CAC40654.1|  336|Homo sapiens doublesex-mab-3 (DM) do...    29   0.84 
BC029566-1|AAH29566.1|  189|Homo sapiens DMRTB1 protein protein.       29   0.88 
BC052781-1|AAH52781.1|  802|Homo sapiens RANBP9 protein protein.       27   2.2  
AK095189-1|BAC04495.1|  634|Homo sapiens protein ( Homo sapiens ...    26   6.5  

>AL365445-2|CAI22836.1|  342|Homo sapiens DMRT-like family B with
           proline-rich C-terminal, 1 protein.
          Length = 342

 Score = 29.1 bits (62), Expect(2) = 0.83
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = +1

Query: 868 PPPPPPPPXXXXXXXXLXIVASRNPDSQ 951
           PPPPPPPP        L      N D Q
Sbjct: 296 PPPPPPPPPSSFSLTVLFDTDKENTDDQ 323



 Score = 23.8 bits (49), Expect(2) = 0.83
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +1

Query: 814 GGGXXXXXXXXXXXXXXXPPPPPPPP 891
           GGG               PPPPPP P
Sbjct: 247 GGGLVSEPGGDFQPSYYLPPPPPPLP 272


>AK057273-1|BAB71407.1|  342|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32711 fis, clone TESTI2000707, weakly similar to
           DOUBLESEX PROTEIN, MALE-SPECIFIC. ).
          Length = 342

 Score = 29.1 bits (62), Expect(2) = 0.83
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = +1

Query: 868 PPPPPPPPXXXXXXXXLXIVASRNPDSQ 951
           PPPPPPPP        L      N D Q
Sbjct: 296 PPPPPPPPPSSFSLTVLFDTDKENTDDQ 323



 Score = 23.8 bits (49), Expect(2) = 0.83
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +1

Query: 814 GGGXXXXXXXXXXXXXXXPPPPPPPP 891
           GGG               PPPPPP P
Sbjct: 247 GGGLVSEPGGDFQPSYYLPPPPPPLP 272


>AJ291671-1|CAC40654.1|  336|Homo sapiens doublesex-mab-3 (DM)
           domain protein.
          Length = 336

 Score = 29.1 bits (62), Expect(2) = 0.84
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = +1

Query: 868 PPPPPPPPXXXXXXXXLXIVASRNPDSQ 951
           PPPPPPPP        L      N D Q
Sbjct: 290 PPPPPPPPPSSFSLTVLFDTDKENTDDQ 317



 Score = 23.8 bits (49), Expect(2) = 0.84
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +1

Query: 814 GGGXXXXXXXXXXXXXXXPPPPPPPP 891
           GGG               PPPPPP P
Sbjct: 241 GGGLVSEPGGDFQPSYYLPPPPPPLP 266


>BC029566-1|AAH29566.1|  189|Homo sapiens DMRTB1 protein protein.
          Length = 189

 Score = 29.1 bits (62), Expect(2) = 0.88
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = +1

Query: 868 PPPPPPPPXXXXXXXXLXIVASRNPDSQ 951
           PPPPPPPP        L      N D Q
Sbjct: 143 PPPPPPPPPSSFSLTVLFDTDKENTDDQ 170



 Score = 23.8 bits (49), Expect(2) = 0.88
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +1

Query: 814 GGGXXXXXXXXXXXXXXXPPPPPPPP 891
           GGG               PPPPPP P
Sbjct: 94  GGGLVSEPGGDFQPSYYLPPPPPPLP 119


>BC052781-1|AAH52781.1|  802|Homo sapiens RANBP9 protein protein.
          Length = 802

 Score = 26.6 bits (56), Expect(2) = 2.2
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +1

Query: 868 PPPPPPPP 891
           PPPPPPPP
Sbjct: 156 PPPPPPPP 163



 Score = 24.6 bits (51), Expect(2) = 2.2
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +1

Query: 808 GGGGGXXXXXXXXXXXXXXXPPPPPP 885
           GGG G               PPPPPP
Sbjct: 125 GGGAGGEGLGAAAAALLLHPPPPPPP 150


>AK095189-1|BAC04495.1|  634|Homo sapiens protein ( Homo sapiens
           cDNA FLJ37870 fis, clone BRSSN2017682, highly similar to
           Mus musculus p300 transcriptional cofactor JMY mRNA. ).
          Length = 634

 Score = 26.2 bits (55), Expect(2) = 6.5
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +1

Query: 871 PPPPPPPXXXXXXXXLXIVASRNPDS 948
           PPPPPPP        L +     P++
Sbjct: 457 PPPPPPPPPPPPPPPLPVAKDSGPET 482



 Score = 23.4 bits (48), Expect(2) = 6.5
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 868 PPPPPPPP 891
           PP PPPPP
Sbjct: 454 PPTPPPPP 461


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,383,998
Number of Sequences: 237096
Number of extensions: 2478115
Number of successful extensions: 52908
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19080
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 13820831500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)