Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_J15
         (935 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0126 - 1340540-1341376,1341437-1341900,1342105-1342156,134...    29   4.0  
08_02_1305 - 26013022-26014107                                         29   5.3  
09_02_0123 + 4537231-4537366,4538088-4538171,4538432-4538586,453...    29   7.0  
10_08_0841 - 20948719-20948919,20949624-20950388,20950475-209510...    28   9.3  
08_02_1310 - 26037025-26038074                                         28   9.3  

>04_01_0126 -
           1340540-1341376,1341437-1341900,1342105-1342156,
           1342225-1342799,1343596-1343703,1345823-1346155,
           1346783-1349306
          Length = 1630

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 11/44 (25%), Positives = 22/44 (50%)
 Frame = +3

Query: 252 PDFWFTSKTEQVGDIFLLHIFIQRYCEGSFSISISYGSEMEIDK 383
           P++ + +KT   GD++   I +     G   +   +G EM ++K
Sbjct: 841 PEYGYGAKTSTSGDVYSYGIMLLEMITGKSPVDQMFGGEMNLEK 884


>08_02_1305 - 26013022-26014107
          Length = 361

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +2

Query: 668 FTLVSEDGEKFRVHKAILAAHSDV 739
           F +V   GE+F  H+A+LAA S V
Sbjct: 187 FVVVGGGGERFAAHRAVLAARSPV 210


>09_02_0123 +
           4537231-4537366,4538088-4538171,4538432-4538586,
           4539115-4539294,4539814-4540169,4540797-4540953
          Length = 355

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +3

Query: 435 NTRENSNSTQIEGEPELGCLEYVSTYNFSNLDVGF 539
           ++++NS+  ++EG  E  CL Y    ++ +L V F
Sbjct: 74  SSQKNSHLQKLEGAKERLCLNYADVMDYDSLSVAF 108


>10_08_0841 -
           20948719-20948919,20949624-20950388,20950475-20951023,
           20951097-20951237,20951313-20951519,20951556-20951724,
           20951899-20952003,20952087-20952208,20952291-20952412,
           20953234-20953516
          Length = 887

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 18/68 (26%), Positives = 33/68 (48%)
 Frame = +3

Query: 228 GTYYLEDLPDFWFTSKTEQVGDIFLLHIFIQRYCEGSFSISISYGSEMEIDKKQKIVRLT 407
           GT+   D P+F  T +     DI+   I I R   G  ++ I+   E+ +DK +  + + 
Sbjct: 688 GTFAYMD-PEFLTTGELTARSDIYSFGIIILRLVTGKPALGIAREVEVALDKGELELLVD 746

Query: 408 KSLKEYKF 431
           +S  ++ F
Sbjct: 747 RSAGDWPF 754


>08_02_1310 - 26037025-26038074
          Length = 349

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +2

Query: 689 GEKFRVHKAILAAHSDVSK 745
           GE FR H+A+LAA S V K
Sbjct: 187 GETFRAHRAVLAARSPVFK 205


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,000,828
Number of Sequences: 37544
Number of extensions: 378832
Number of successful extensions: 803
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2682675460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)