Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_J14
(999 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 44 4e-05
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 38 0.002
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 36 0.012
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 35 0.021
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.027
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 33 0.048
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.15
SPBC317.01 |mbx2|pvg4|MADS-box transcription factor Pvg4|Schizos... 29 1.4
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 29 1.4
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 28 2.4
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 4.1
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 26 4.7
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 9.5
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 43.6 bits (98), Expect = 4e-05
Identities = 33/128 (25%), Positives = 35/128 (27%)
Frame = +2
Query: 599 PXPXPXKXXXXXPPXQXAXTPPPXPXTXXPRXTPRPXGGXXPPXXXPPRXXXPPXDPPPX 778
P P P Q PPP P PR P G PP R P PPP
Sbjct: 341 PPPRSNAAGSIPLPPQGRSAPPPPP----PRSAPST--GRQPPPLSSSRAVSNPPAPPPA 394
Query: 779 XXXXXXXXXXXXDTAXXXARPPXPTXPXXPPXPXXPXPTNPRAXXPPXXRTXPXPAXXXP 958
A + PP PT P PP P + P P P
Sbjct: 395 IPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAP 454
Query: 959 XGPAXRXG 982
P G
Sbjct: 455 IAPPLPAG 462
Score = 33.9 bits (74), Expect = 0.036
Identities = 35/134 (26%), Positives = 38/134 (28%), Gaps = 8/134 (5%)
Frame = +2
Query: 581 PPXRXXPXPXPXKXXXXX----PPXQX--AXTPPPXPXTXXP-RXTPR-PXGGXXPPXXX 736
P R P P P + PP A + PP P P R P P G
Sbjct: 355 PQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTST 414
Query: 737 PPRXXXPPXDPPPXXXXXXXXXXXXXDTAXXXARPPXPTXPXXPPXPXXPXPTNPRAXXP 916
PP PP PP A P P+ P PP P P
Sbjct: 415 PP-VPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAA 473
Query: 917 PXXRTXPXPAXXXP 958
P P PA P
Sbjct: 474 PAPPPAPAPAPAAP 487
Score = 30.7 bits (66), Expect = 0.34
Identities = 22/96 (22%), Positives = 25/96 (26%)
Frame = +1
Query: 583 PPPXXPPPXXXKXXXXXPPXXXXXXPAPPXXNXQXPXNXXXXXXXXXXXXXPPAXXXXTX 762
PPP PP PP P PP + PPA
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPA------ 390
Query: 763 RPPPXXXXPNPPXXPPXXHRXXXRPTAXPDXAXXPP 870
PPP + P PP + P PP
Sbjct: 391 -PPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPP 425
Score = 30.3 bits (65), Expect = 0.44
Identities = 21/79 (26%), Positives = 21/79 (26%), Gaps = 6/79 (7%)
Frame = +3
Query: 690 AXPPXPXGXXXRPXPPPRXXXXHPKTPPXXPXPQPPXXP------PXXTPXAXXPDRRPR 851
A PP P P P PP P PP P P P A P
Sbjct: 402 ALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPA 461
Query: 852 RXXXXPPXXPXPXRRTPGP 908
PP P P P
Sbjct: 462 GMPAAPPLPPAAPAPPPAP 480
Score = 30.3 bits (65), Expect = 0.44
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +3
Query: 690 AXPPXPXGXXXRPXPPPRXXXXHPKTPPXXPXPQPPXXPPXXTPXA 827
A PP P P P P P PP P P P P P A
Sbjct: 445 AAPPLPPSAPIAP-PLPAGMPAAPPLPPAAPAPPPAPAPAPAAPVA 489
Score = 29.5 bits (63), Expect = 0.78
Identities = 20/70 (28%), Positives = 22/70 (31%)
Frame = +3
Query: 696 PPXPXGXXXRPXPPPRXXXXHPKTPPXXPXPQPPXXPPXXTPXAXXPDRRPRRXXXXPPX 875
PP P PPR P +PP PP A +R PP
Sbjct: 258 PPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKR----PPP 313
Query: 876 XPXPXRRTPG 905
P P RR G
Sbjct: 314 PPPPSRRNRG 323
Score = 29.1 bits (62), Expect = 1.0
Identities = 21/80 (26%), Positives = 21/80 (26%)
Frame = +3
Query: 705 PXGXXXRPXPPPRXXXXHPKTPPXXPXPQPPXXPPXXTPXAXXPDRRPRRXXXXPPXXPX 884
P G R PP P PP P PP PP A P PP
Sbjct: 405 PLGNASRTSTPP--VPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAG 462
Query: 885 PXRRTPGPTXPXXXEXXPXP 944
P P P P
Sbjct: 463 MPAAPPLPPAAPAPPPAPAP 482
Score = 28.3 bits (60), Expect = 1.8
Identities = 29/131 (22%), Positives = 30/131 (22%), Gaps = 4/131 (3%)
Frame = +1
Query: 580 TPPPXXPPPXXXKXXXXXPPXXXXXXPAPPXXNXQXPXNXXXXXXXXXXXXXPPAXXXXT 759
TP PP PP AP P N PP
Sbjct: 223 TPTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNS----PPRPIAPV 278
Query: 760 XRPPPXXXXPNPPXXPPXXHRXXXRPTAXPDXAXXPPPXXXPRXDEPP----GXXXPXPP 927
P PP PP A PPP +PP PP
Sbjct: 279 SMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPP 338
Query: 928 NXXRPRXXXAG 960
PR AG
Sbjct: 339 PPPPPRSNAAG 349
Score = 28.3 bits (60), Expect = 1.8
Identities = 17/71 (23%), Positives = 19/71 (26%)
Frame = +3
Query: 705 PXGXXXRPXPPPRXXXXHPKTPPXXPXPQPPXXPPXXTPXAXXPDRRPRRXXXXPPXXPX 884
P P PP P+ P P PP PP P P R P
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPA 283
Query: 885 PXRRTPGPTXP 917
+ P P
Sbjct: 284 INSTSKPPLPP 294
Score = 28.3 bits (60), Expect = 1.8
Identities = 29/107 (27%), Positives = 31/107 (28%), Gaps = 4/107 (3%)
Frame = +2
Query: 599 PXPXPXKXXXXXPPXQXAX---TPP-PXPXTXXPRXTPRPXGGXXPPXXXPPRXXXPPXD 766
P P + PP A TPP P P + P P PP P P
Sbjct: 392 PPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPS-----LPPSAPPSLPMGAPAA 446
Query: 767 PPPXXXXXXXXXXXXXDTAXXXARPPXPTXPXXPPXPXXPXPTNPRA 907
PP A A PP P PP P P P A
Sbjct: 447 PPLPPSAPIAPPLP----AGMPAAPPLPPAAPAPPPAPAPAPAAPVA 489
Score = 27.5 bits (58), Expect = 3.1
Identities = 17/72 (23%), Positives = 17/72 (23%)
Frame = +1
Query: 574 PXTPPPXXPPPXXXKXXXXXPPXXXXXXPAPPXXNXQXPXNXXXXXXXXXXXXXPPAXXX 753
P PP PP PP PA P P PPA
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPA 475
Query: 754 XTXRPPPXXXXP 789
P P P
Sbjct: 476 PPPAPAPAPAAP 487
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 38.3 bits (85), Expect = 0.002
Identities = 22/63 (34%), Positives = 24/63 (38%)
Frame = -3
Query: 850 RGRRSGXXAXGVXXGGXXGGWGXGXXGGVXGWXSXXRGGGXGRXXXPXGXGGXAGXVRXG 671
RG R G G GG+G G G G RGG GR G GG +G
Sbjct: 8 RGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGA 67
Query: 670 XGG 662
GG
Sbjct: 68 KGG 70
Score = 27.9 bits (59), Expect = 2.4
Identities = 22/64 (34%), Positives = 22/64 (34%)
Frame = -2
Query: 848 GXAVGRXXXRCXXGGXXGGLGXXXXGGGLXVXXXXAGGXXGAGGXPPRXGGXXGXCXLXX 669
G GR R GG GG G G G GG GA G GG G
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRG----GARGGGRGGARGGRGGRGGARGGRGGSS 61
Query: 668 GGAG 657
GG G
Sbjct: 62 GGRG 65
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 35.5 bits (78), Expect = 0.012
Identities = 42/204 (20%), Positives = 45/204 (22%), Gaps = 3/204 (1%)
Frame = +2
Query: 365 APGAPXPTXX--TPXPTXXPPTXXPXXGNPXXXPPPPXXXXTXGXRXXXXXXXXXXXXXX 538
AP P P+ P PT PP G P PP P
Sbjct: 1031 APPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSG 1090
Query: 539 XXXXXXXXXXXRHXPPXRXXPXPXPXKXXXXXPPXQXAXTPP-PXPXTXXPRXTPRPXGG 715
P P P P PP P P P P
Sbjct: 1091 IPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAP 1150
Query: 716 XXPPXXXPPRXXXPPXDPPPXXXXXXXXXXXXXDTAXXXARPPXPTXPXXPPXPXXPXPT 895
P P P PP A PP P P P
Sbjct: 1151 PVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPV 1210
Query: 896 NPRAXXPPXXRTXPXPAXXXPXGP 967
P + PP P P+ P P
Sbjct: 1211 PPPSTAPP----VPTPSAGLPPVP 1230
Score = 33.9 bits (74), Expect = 0.036
Identities = 44/227 (19%), Positives = 51/227 (22%), Gaps = 12/227 (5%)
Frame = +1
Query: 328 TPXPXRXXXGXTRPXXPXPHXQXPXPHXXPPHXGPXXRKPQXXPPPPKXXXXXXXXXXKH 507
TP + G P P P P P P PP PK
Sbjct: 1049 TPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPS 1108
Query: 508 TPQXXXKXXXXXXXXXXXXXXAPXTPPPXXPPPXXXKXXXXXPPXXXXXXPAPPXXNXQX 687
AP P P PP P P P +
Sbjct: 1109 VAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAA 1168
Query: 688 P----XNXXXXXXXXXXXXXPPAXXXXTXRPPPXXXXPNPPXXPPXXHRXXXRPTA---- 843
P + PP P P PP PP P+A
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Query: 844 XPDXAXXPPPXXXPRXDEP----PGXXXPXPPNXXRPRXXXAGXARA 972
P PP P + P P P P + P + A A
Sbjct: 1229 VPVPTAKAPPVPAPSSEAPSVSTPRSSVPSPHSNASPSPTSSSMASA 1275
Score = 25.8 bits (54), Expect = 9.5
Identities = 21/85 (24%), Positives = 22/85 (25%), Gaps = 1/85 (1%)
Frame = +3
Query: 696 PPXPXGXXXRPXPPPRXXXXHPKTPPXXPXPQPP-XXPPXXTPXAXXPDRRPRRXXXXPP 872
PP P P P P PK+ P PP P P P P
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAP-PVPAPSG 1090
Query: 873 XXPXPXRRTPGPTXPXXXEXXPXPP 947
P P P P P P
Sbjct: 1091 IPPVPKPSVAAPPVPKPSVAVPPVP 1115
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 34.7 bits (76), Expect = 0.021
Identities = 24/69 (34%), Positives = 25/69 (36%), Gaps = 5/69 (7%)
Frame = -3
Query: 847 GRRSGXXAXGVXXGGXXGGWGX-----GXXGGVXGWXSXXRGGGXGRXXXPXGXGGXAGX 683
G SG G G GG+G G GG G GG G P G GG G
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGG 253
Query: 682 VRXGXGGRG 656
G GG G
Sbjct: 254 FGGGPGGFG 262
Score = 31.5 bits (68), Expect = 0.19
Identities = 26/80 (32%), Positives = 26/80 (32%)
Frame = -2
Query: 926 GGXGXXXPGGSSXRGXXXGGGXXASSGXAVGRXXXRCXXGGXXGGLGXXXXGGGLXVXXX 747
GG G PG G GG G G GG GG G G G
Sbjct: 195 GGSGGPPPGPGGFGGFGGFGGEGHHHG---GHGGFGGGPGGFEGGPGGFGGGPG-----G 246
Query: 746 XAGGXXGAGGXPPRXGGXXG 687
GG G GG P GG G
Sbjct: 247 FGGGLGGFGGGPGGFGGGPG 266
Score = 30.7 bits (66), Expect = 0.34
Identities = 30/115 (26%), Positives = 32/115 (27%)
Frame = -2
Query: 977 RVARAXPAXXXRGRXXFGGXGXXXPGGSSXRGXXXGGGXXASSGXAVGRXXXRCXXGGXX 798
R + P G GG G GGG G + G GG
Sbjct: 152 RPSYVAPVAAGLGGLALGGLASHALGNLFHHRGHNGGGFGGFGGGSGGPPPGPGGFGGFG 211
Query: 797 GGLGXXXXGGGLXVXXXXAGGXXGAGGXPPRXGGXXGXCXLXXGGAGXXXXXXGG 633
G G GG GG G G P GG G GG G GG
Sbjct: 212 GFGGEGHHHGG---HGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGG 263
Score = 29.1 bits (62), Expect = 1.0
Identities = 23/73 (31%), Positives = 23/73 (31%), Gaps = 2/73 (2%)
Frame = -3
Query: 868 GXXXXRRGRRSGXXAX--GVXXGGXXGGWGXGXXGGVXGWXSXXRGGGXGRXXXPXGXGG 695
G RG G G G G G G GG G GG G P G G
Sbjct: 177 GNLFHHRGHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGG-EGHHHGGHGGFGGGPGGFEG 235
Query: 694 XAGXVRXGXGGRG 656
G G GG G
Sbjct: 236 GPGGFGGGPGGFG 248
Score = 28.7 bits (61), Expect = 1.4
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = -2
Query: 809 GGXXGGLGXXXXGGGLXVXXXXAGGXXGAGGXPPRXGGXXGXCXLXXGGAGXXXXXXGGX 630
GG G G GG GG G GG P G G GG G GG
Sbjct: 198 GGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGG 257
Query: 629 XXXF 618
F
Sbjct: 258 PGGF 261
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.3 bits (75), Expect = 0.027
Identities = 19/49 (38%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
Frame = +2
Query: 635 PPXQXAXTPPPXPXTXXPRXTPRPXGGXXPPXXXPP--RXXXPPXDPPP 775
PP TP P P P P P G PP PP PP PPP
Sbjct: 736 PPAVIVPTPAPAPIPVPP---PAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 33.1 bits (72), Expect = 0.063
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 2/50 (4%)
Frame = +2
Query: 599 PXPXPXKXXXXXPPXQXAXTPPPXPXTXXPRXTPRPXG--GXXPPXXXPP 742
P P P P PPP P P P P G G PP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 29.1 bits (62), Expect = 1.0
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +3
Query: 732 PPPRXXXXHPKTPPXXPXPQPPXXPPXXTPXAXXPDRRPRRXXXXPPXXPXP 887
PPP TP P P PP P P P PP P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 28.7 bits (61), Expect = 1.4
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +2
Query: 659 PPPXPXTXXPRXTPRPXGGXXPPXXXPPRXXXPPXDPPP 775
PPP P P TP P PP P PP PPP
Sbjct: 733 PPPPPAVIVP--TPAPAPIPVPP-PAPIMGGPPPPPPPP 768
Score = 27.1 bits (57), Expect = 4.1
Identities = 15/54 (27%), Positives = 15/54 (27%)
Frame = +3
Query: 726 PXPPPRXXXXHPKTPPXXPXPQPPXXPPXXTPXAXXPDRRPRRXXXXPPXXPXP 887
P PPP P PP P PP P R P P P
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
Score = 26.6 bits (56), Expect = 5.5
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +3
Query: 696 PPXPXGXXXRPXPPPRXXXXHPKTPPXXPXPQPPXXPPXXTPXAXXPDRRP 848
PP P P P P P P P PP PP A P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP--PPPGVAGAGPPPPPP 780
Score = 26.2 bits (55), Expect = 7.2
Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 3/45 (6%)
Frame = +2
Query: 365 APGAPXPTXXTPXPTXXP---PTXXPXXGNPXXXPPPPXXXXTXG 490
+P P P P P P P P G P PPPP G
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGP---PPPPPPPGVAG 772
Score = 26.2 bits (55), Expect = 7.2
Identities = 12/40 (30%), Positives = 12/40 (30%)
Frame = +2
Query: 377 PXPTXXTPXPTXXPPTXXPXXGNPXXXPPPPXXXXTXGXR 496
P P P PP P PPPP G R
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSR 791
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 33.5 bits (73), Expect = 0.048
Identities = 22/77 (28%), Positives = 24/77 (31%), Gaps = 3/77 (3%)
Frame = +2
Query: 698 PRPXGGXXPPXXXPPRXXXPPXDP---PPXXXXXXXXXXXXXDTAXXXARPPXPTXPXXP 868
P P PP PPR PP P PP A A P + P P
Sbjct: 131 PTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAA--PVKSPPSAP 188
Query: 869 PXPXXPXPTNPRAXXPP 919
P P P+ PP
Sbjct: 189 SLPSAVPPMPPKVPPPP 205
Score = 31.9 bits (69), Expect = 0.15
Identities = 24/89 (26%), Positives = 27/89 (30%), Gaps = 8/89 (8%)
Frame = +3
Query: 696 PPXPXGXXXRPX--PPPRXXXXHPKTPPXXPX------PQPPXXPPXXTPXAXXPDRRPR 851
PP P P PPP K+PP P P PP PP A + R
Sbjct: 158 PPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSR 217
Query: 852 RXXXXPPXXPXPXRRTPGPTXPXXXEXXP 938
PP P + P P P
Sbjct: 218 PSSFAPPAGHAPNVTSESPKFPNRGPSIP 246
Score = 28.3 bits (60), Expect = 1.8
Identities = 23/101 (22%), Positives = 27/101 (26%), Gaps = 1/101 (0%)
Frame = +1
Query: 571 APXTPPPXXPPPXXXKXXXXXPPXXXXXXPAPPXXNXQXPXNXXXXXXXXXXXXXPP-AX 747
AP TP PP PP P P P + PP A
Sbjct: 129 APPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAP 188
Query: 748 XXXTXRPPPXXXXPNPPXXPPXXHRXXXRPTAXPDXAXXPP 870
+ PP P PP RP++ A P
Sbjct: 189 SLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPAGHAP 229
Score = 27.9 bits (59), Expect = 2.4
Identities = 19/78 (24%), Positives = 21/78 (26%), Gaps = 4/78 (5%)
Frame = +3
Query: 726 PXPPPRXXXXHPKTP----PXXPXPQPPXXPPXXTPXAXXPDRRPRRXXXXPPXXPXPXR 893
P PP P T P P P P PP + P P P P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSA 187
Query: 894 RTPGPTXPXXXEXXPXPP 947
+ P P PP
Sbjct: 188 PSLPSAVPPMPPKVPPPP 205
Score = 25.8 bits (54), Expect = 9.5
Identities = 15/54 (27%), Positives = 16/54 (29%), Gaps = 1/54 (1%)
Frame = +3
Query: 759 PKTPPXXPXPQPPXXPPXXT-PXAXXPDRRPRRXXXXPPXXPXPXRRTPGPTXP 917
P + P P PQ PP P P P P P P P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.9 bits (69), Expect = 0.15
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +2
Query: 635 PPXQXAXTPPPXPXTXXPRXTPRPXGGXXPPXXXPPRXXXPPXDPPP 775
PP + PP P P P PP PP PP PPP
Sbjct: 1690 PPVRPQSAAPPQMSAPTP---PPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 31.9 bits (69), Expect = 0.15
Identities = 14/44 (31%), Positives = 17/44 (38%)
Frame = +2
Query: 611 PXKXXXXXPPXQXAXTPPPXPXTXXPRXTPRPXGGXXPPXXXPP 742
P + PP A TPPP P + P + P P PP
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 28.7 bits (61), Expect = 1.4
Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 3/48 (6%)
Frame = +2
Query: 833 ARPPXPTXPXXPPXPXX-PXPTN--PRAXXPPXXRTXPXPAXXXPXGP 967
A PP + P PP P P P + P PP P PA P P
Sbjct: 1697 AAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 28.7 bits (61), Expect = 1.4
Identities = 12/40 (30%), Positives = 14/40 (35%)
Frame = +2
Query: 839 PPXPTXPXXPPXPXXPXPTNPRAXXPPXXRTXPXPAXXXP 958
PP P PP P P P + PP P+ P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 27.9 bits (59), Expect = 2.4
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +3
Query: 726 PXPPPRXXXXHPKTPPXXPXPQPPXXPPXXTPXAXXP 836
P PPP P PP P P PP P + P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGP--PSAPPPPLPASSAP 1741
Score = 27.1 bits (57), Expect = 4.1
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +2
Query: 365 APGAPXPTXXTPXPTXXPPTXXPXXGNPXXXPPPP 469
AP P P P P P+ P P PPPP
Sbjct: 1704 APTPPPPPMSVPPP----PSAPPMPAGPPSAPPPP 1734
Score = 26.2 bits (55), Expect = 7.2
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = +2
Query: 821 AXXXARPPXPTXPXXPPXPXXPXPTNPRAXXPPXXRTXPXPA 946
A + PP PP P P P PP P PA
Sbjct: 1684 AHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPA 1725
Score = 25.8 bits (54), Expect = 9.5
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = +2
Query: 842 PXPTXPXXPPXPXXPXPTNPRAXXPPXXRTXPXPAXXXPXGP 967
P T P P P + P PP P A P GP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGP 1727
>SPBC317.01 |mbx2|pvg4|MADS-box transcription factor
Pvg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 372
Score = 28.7 bits (61), Expect = 1.4
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +1
Query: 364 RPXXPXPHXQXPXPHXXPPHXGPXXRKPQXXPPPP 468
R P P Q PH PPH P PPP
Sbjct: 158 RSCPPFPPTQHHHPHTRPPHHPPHPHFHNNNYPPP 192
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 28.7 bits (61), Expect = 1.4
Identities = 20/61 (32%), Positives = 21/61 (34%)
Frame = -3
Query: 841 RSGXXAXGVXXGGXXGGWGXGXXGGVXGWXSXXRGGGXGRXXXPXGXGGXAGXVRXGXGG 662
R G GG GG+G GG G GG G GG G R G G
Sbjct: 137 RGGRGGFRGGRGGSRGGFGGNSRGGFGG----GSRGGFGGGSRGGSRGGFRGGSRGGFRG 192
Query: 661 R 659
R
Sbjct: 193 R 193
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 27.9 bits (59), Expect = 2.4
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +2
Query: 842 PXPTXPXXPPXPXXPXPTNPRAXXPPXXRTXPXPAXXXPXGP 967
P P PP P P P P PP P P P P
Sbjct: 99 PEEPLPREPPLPNEPVPEEPLPGEPPLP-DEPVPEEPLPGEP 139
Score = 25.8 bits (54), Expect = 9.5
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = +2
Query: 842 PXPTXPXXPPXPXXPXPTNPRAXXPP 919
P P PP P P P P PP
Sbjct: 115 PEEPLPGEPPLPDEPVPEEPLPGEPP 140
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.1 bits (57), Expect = 4.1
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = +3
Query: 711 GXXXRPXPPPRXXXXHPKTPPXXPXPQPPXXPPXXTPXAXXP 836
G P PP P P P PP PP T + P
Sbjct: 216 GRAVSPEIPPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLP 257
Score = 26.2 bits (55), Expect = 7.2
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 383 PTXXTPXPTXXPPTXXPXXGNPXXXPPPP 469
P P P T P NP PPPP
Sbjct: 168 PPSFQPPSAAAPATSLPSDYNPPPPPPPP 196
Score = 26.2 bits (55), Expect = 7.2
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +2
Query: 416 PPTXXPXXGNPXXXPPPP 469
PPT P +P PPPP
Sbjct: 224 PPTYTPKQADPLPAPPPP 241
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 26.2 bits (55), Expect = 7.2
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 865 PPPXXXPRXDEPPGXXXPXPP 927
PPP P EPP P PP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPP 29
Score = 25.8 bits (54), Expect = 9.5
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = +3
Query: 756 HPKTPPXXPXPQPPXXPPXXTPXAXXPDRR 845
+P PP P +PP PP P R+
Sbjct: 8 NPPPPPPPPGFEPPSQPPPPPPPGYVKKRK 37
Score = 25.8 bits (54), Expect = 9.5
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 722 PPXXXPPRXXXPPXDPPP 775
PP PP PP PPP
Sbjct: 9 PPPPPPPPGFEPPSQPPP 26
Score = 23.8 bits (49), Expect(2) = 4.7
Identities = 9/24 (37%), Positives = 10/24 (41%)
Frame = +1
Query: 397 PXPHXXPPHXGPXXRKPQXXPPPP 468
P + PP P P PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 21.0 bits (42), Expect(2) = 4.7
Identities = 8/22 (36%), Positives = 9/22 (40%)
Frame = +1
Query: 574 PXTPPPXXPPPXXXKXXXXXPP 639
P + PP PPP K P
Sbjct: 20 PPSQPPPPPPPGYVKKRKNKTP 41
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 25.8 bits (54), Expect = 9.5
Identities = 16/64 (25%), Positives = 16/64 (25%)
Frame = +3
Query: 696 PPXPXGXXXRPXPPPRXXXXHPKTPPXXPXPQPPXXPPXXTPXAXXPDRRPRRXXXXPPX 875
PP P PP PP P P P TP R P
Sbjct: 1011 PPKQPANRVVPLPPTASQRASAYEPPTVSVPSPSALSPSVTPQLPPVSSRLPPVSATRPQ 1070
Query: 876 XPXP 887
P P
Sbjct: 1071 IPQP 1074
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.138 0.473
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,873,746
Number of Sequences: 5004
Number of extensions: 28032
Number of successful extensions: 278
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 152
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 517271174
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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