Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_J09
         (940 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0157 + 27075179-27075529,27075849-27076043,27077705-270780...    28   9.3  
01_05_0328 + 21035231-21036931                                         28   9.3  

>01_06_0157 +
           27075179-27075529,27075849-27076043,27077705-27078036,
           27078157-27078577
          Length = 432

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
 Frame = -1

Query: 184 QYVQWA---GQNIRNEPRSQWSRVNKGYADNHQQYLLCERHDVQG 59
           QYV WA   GQ I ++     + V KG+  NH + +L  ++ + G
Sbjct: 149 QYVNWARAQGQGIGSDDEFFTNPVVKGFYKNHVKTVLTRKNTITG 193


>01_05_0328 + 21035231-21036931
          Length = 566

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 56  SPLDIMALTQQILLVIIGVAFVYSAPL 136
           +P+ +  LT Q LLV  G AF+Y+  L
Sbjct: 438 TPISVFLLTPQFLLVGAGEAFIYTGQL 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,663,405
Number of Sequences: 37544
Number of extensions: 271673
Number of successful extensions: 422
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 422
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2694390200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)