Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_J07
(889 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0661 - 30693701-30693853,30694037-30694196,30694290-306943... 178 6e-45
04_04_1445 - 33658355-33658417,33658536-33658669,33659056-336591... 175 3e-44
03_02_0210 - 6425708-6425863,6425955-6426114,6426204-6426295,642... 149 4e-36
03_05_0899 - 28619081-28619208,28619309-28619369,28619936-286200... 143 1e-34
11_01_0136 + 1135170-1135406,1135854-1136240 33 0.23
01_06_1805 - 39999987-40000169,40000648-40000974,40001724-400020... 33 0.23
08_02_1178 + 24958623-24959894 29 4.9
05_04_0373 + 20732358-20732675,20733555-20734440,20734523-20735625 29 6.5
02_05_0774 + 31667839-31668540 29 6.5
07_03_0523 + 19030078-19031109 28 8.6
02_05_1131 - 34328168-34328557,34328838-34328957,34329067-343291... 28 8.6
01_06_1260 - 35820781-35821161,35821163-35821420,35821524-35821976 28 8.6
>02_05_0661 -
30693701-30693853,30694037-30694196,30694290-30694381,
30694469-30694543,30694671-30694799,30694916-30695003,
30695118-30695224,30695645-30695693,30695802-30695905,
30696108-30696147,30696838-30696911
Length = 356
Score = 178 bits (433), Expect = 6e-45
Identities = 88/202 (43%), Positives = 114/202 (56%), Gaps = 4/202 (1%)
Frame = +2
Query: 296 DKVLATYVWIDGSGEHVRCKDRTLNYIPETPKDLPIWNYXXXXXXXXXXXXXXXHLKPQA 475
+K++A Y+WI GSG +R K RTL+ P LP WNY L PQA
Sbjct: 17 EKIIAEYIWIGGSGMDLRSKARTLSGPVTDPSKLPKWNYDGSSTGQAPGEDSEVILYPQA 76
Query: 476 IYRDPFRRGNHVLVMCDTYDYSMQPTKTNHRIKCQEAYD--RCRDHEPWFGIEQEYVLLD 649
I++DPFR+GN++LVMCD Y + +P TN R + + EPW+GIEQEY LL
Sbjct: 77 IFKDPFRKGNNILVMCDCYTPAGEPIPTNKRHNAAKIFSSPEVASEEPWYGIEQEYTLLQ 136
Query: 650 SDLR-PFGWPTTGSPPAQGPYYCGVGANKVFARDLIEAHYKCCLYAGSADHRYER*XDAL 826
D+ P GWP G P QGPYYCG+GA+K F RD++++HYK CLYAG
Sbjct: 137 KDINWPLGWPVGGFPGPQGPYYCGIGADKSFGRDIVDSHYKACLYAGINISGINGEVMPG 196
Query: 827 AVGVQVGPSLAXS-WKXLWIAR 889
QVGPS+ S +W+AR
Sbjct: 197 QWEFQVGPSVGISAGDQVWVAR 218
>04_04_1445 - 33658355-33658417,33658536-33658669,33659056-33659116,
33659197-33659356,33660032-33660081,33662237-33662290,
33662630-33662704,33662821-33662949,33663065-33663152,
33663266-33663372,33663513-33663561,33663657-33663760,
33663941-33663980,33664409-33664659,33664674-33664686,
33665846-33666355,33666437-33667657,33667973-33668221,
33668305-33668531
Length = 1194
Score = 175 bits (427), Expect = 3e-44
Identities = 87/202 (43%), Positives = 115/202 (56%), Gaps = 4/202 (1%)
Frame = +2
Query: 296 DKVLATYVWIDGSGEHVRCKDRTLNYIPETPKDLPIWNYXXXXXXXXXXXXXXXHLKPQA 475
DK++A Y+W+ G+G +R K RT++ E P +LP WNY L PQA
Sbjct: 816 DKIIAEYIWVGGTGIDLRSKSRTISKPVEDPSELPKWNYDGSSTGQAPGEDSEVILYPQA 875
Query: 476 IYRDPFRRGNHVLVMCDTYDYSMQPTKTNHRIKCQEAYD--RCRDHEPWFGIEQEYVLLD 649
I++DPFR GN++LVMCDTY + +P TN R + + + + PWFGIEQEY LL
Sbjct: 876 IFKDPFRGGNNILVMCDTYTPAGEPIPTNKRNRAAQVFSDPKVVSQVPWFGIEQEYTLLQ 935
Query: 650 SDLR-PFGWPTTGSPPAQGPYYCGVGANKVFARDLIEAHYKCCLYAGSADHRYER*XDAL 826
D+ P GWP G P QGPYYC VG++K F RD+ +AHYK CLYAG
Sbjct: 936 RDVNWPLGWPVGGYPGPQGPYYCAVGSDKSFGRDISDAHYKACLYAGINISGTNGEVMPG 995
Query: 827 AVGVQVGPSLA-XSWKXLWIAR 889
QVGPS+ + +WI+R
Sbjct: 996 QWEYQVGPSVGIEAGDHIWISR 1017
>03_02_0210 -
6425708-6425863,6425955-6426114,6426204-6426295,
6426490-6426564,6426701-6426829,6427312-6427375,
6427761-6427867,6428795-6428843,6428955-6429058,
6429166-6429205,6429492-6429565
Length = 349
Score = 149 bits (360), Expect = 4e-36
Identities = 80/202 (39%), Positives = 104/202 (51%), Gaps = 4/202 (1%)
Frame = +2
Query: 296 DKVLATYVWIDGSGEHVRCKDRTLNYIPETPKDLPIWNYXXXXXXXXXXXXXXXHLKPQA 475
DK++A Y+W+ GSG +R K RT+ LP WNY L PQA
Sbjct: 17 DKIIAEYIWVGGSGIDLRSKARTVKGPITDVSQLPKWNYDGSSTGQAPGEDSEVILYPQA 76
Query: 476 IYRDPFRRGNHVLVMCDTYDYSMQPTKTNHRIKCQEAYDR--CRDHEPWFGIEQEYVLLD 649
I++DPFRRG+++LVMCD Y +P TN R + + PW+GIEQEY LL
Sbjct: 77 IFKDPFRRGDNILVMCDCYTPQGEPIPTNKRHSAAKIFSHPDVVAEVPWYGIEQEYTLLQ 136
Query: 650 SDLR-PFGWPTTGSPPAQGPYYCGVGANKVFARDLIEAHYKCCLYAGSADHRYER*XDAL 826
D+ P GWP GPYYC GA K F RD+++AHYK C+YAG
Sbjct: 137 KDVNWPLGWP--------GPYYCAAGAEKAFGRDIVDAHYKACIYAGINISGINGEVMPG 188
Query: 827 AVGVQVGPSLA-XSWKXLWIAR 889
QVGPS+ + +W+AR
Sbjct: 189 QWEFQVGPSVGIAAADQVWVAR 210
>03_05_0899 -
28619081-28619208,28619309-28619369,28619936-28620095,
28620200-28620237,28620341-28620394,28620562-28620636,
28620744-28620872,28621172-28621259,28621340-28621446,
28621547-28621595,28621683-28621786,28622019-28622133,
28622517-28622596
Length = 395
Score = 143 bits (347), Expect = 1e-34
Identities = 65/152 (42%), Positives = 88/152 (57%), Gaps = 3/152 (1%)
Frame = +2
Query: 341 HVRCKDRTLNYIPETPKDLPIWNYXXXXXXXXXXXXXXXHLKPQAIYRDPFRRGNHVLVM 520
H++ + TL+ + P LP WN+ L PQAI+RDPFR+G ++LVM
Sbjct: 59 HLKEVNHTLSGPVDDPSKLPKWNFDGSSTGQATGDDSEVILHPQAIFRDPFRKGKNILVM 118
Query: 521 CDTYDYSMQPTKTNHRIKCQEAYDR--CRDHEPWFGIEQEYVLLDSDLR-PFGWPTTGSP 691
CD Y + +P TN+R + + EPW+GIEQEY LL + P GWP G P
Sbjct: 119 CDCYAPNGEPIPTNNRYNAARIFSHPDVKAEEPWYGIEQEYTLLQKHINWPLGWPLGGYP 178
Query: 692 PAQGPYYCGVGANKVFARDLIEAHYKCCLYAG 787
QGPYYC GA+K + RD+++AHYK CL+AG
Sbjct: 179 GPQGPYYCAAGADKSYGRDIVDAHYKACLFAG 210
Score = 31.5 bits (68), Expect = 0.93
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 771 AVCMLGVPITGTNAXAMLSQWEFKSGP 851
A G+ I+G NA M QWEF+ GP
Sbjct: 205 ACLFAGINISGINAEVMPGQWEFQIGP 231
>11_01_0136 + 1135170-1135406,1135854-1136240
Length = 207
Score = 33.5 bits (73), Expect = 0.23
Identities = 24/105 (22%), Positives = 44/105 (41%)
Frame = +1
Query: 157 ARKMSETQNKVQDNPKILSXSGAKELSKCIPLEDTVGPVQRSTAAGRQGPRHIRMDRRLR 336
AR+ T+ V+ I S + + +K IP+ + P + GR+ R + M L+
Sbjct: 66 AREELRTKGYVERWTSIASSARVHQFTKSIPIPNKATPSEEEELKGREEDRCVAMTNELK 125
Query: 337 RACSLQRQDFELHSRDS*RPADMELRRQLYRPDDKHELRHAPEAP 471
R CS + E + + + ++++ H L P AP
Sbjct: 126 R-CSKEATPSEEKAAKKMKKEEAVKKKRMPMERVHHLLSMVPRAP 169
>01_06_1805 -
39999987-40000169,40000648-40000974,40001724-40002017,
40002112-40002231,40002714-40002776,40003150-40003310,
40003864-40004035
Length = 439
Score = 33.5 bits (73), Expect = 0.23
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 735 SSRGISLKPIINAVCMLGVPITGTNAXAMLSQWEFKSGPRWRXAGN 872
SSRG + P +++ G P TGT A + F PRW+ N
Sbjct: 205 SSRGSPIYPSVHSSATAGPPYTGTMASWAFPRGSFIPSPRWQNPSN 250
>08_02_1178 + 24958623-24959894
Length = 423
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -1
Query: 631 LLYAEPRLVVSAAVVRFLALNTVVCLCWLHA 539
L YA P V S A +RF V LC LHA
Sbjct: 98 LRYALPDRVFSPAAIRFYVAEIVSALCELHA 128
>05_04_0373 + 20732358-20732675,20733555-20734440,20734523-20735625
Length = 768
Score = 28.7 bits (61), Expect = 6.5
Identities = 23/83 (27%), Positives = 37/83 (44%)
Frame = +1
Query: 295 RQGPRHIRMDRRLRRACSLQRQDFELHSRDS*RPADMELRRQLYRPDDKHELRHAPEAPG 474
R P H R LR A +L+R + +++ + +++R L H + P++ G
Sbjct: 71 RANPTHHRR-LLLRSANTLERNTLKKKPKEA-VTTEEKVKRDLSHT--VHGVHPPPQSAG 126
Query: 475 HIQGPVPARKPRACHVRHIRLQH 543
+ AR PR H H RL H
Sbjct: 127 DLSA---ARNPRGAHFNHRRLHH 146
>02_05_0774 + 31667839-31668540
Length = 233
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +2
Query: 626 EQEYVLLDSDLRPFGWPT--TGSPPAQGPYYCGVGA 727
+Q+ L + LRP G P +GSPP GP+ GA
Sbjct: 23 QQQRALAGAFLRPRGQPMKQSGSPPRAGPFAAVAGA 58
>07_03_0523 + 19030078-19031109
Length = 343
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 451 RHAPEAPGHIQGPVPARKPRACHVRH 528
R + G +QGPVPAR+P A ++H
Sbjct: 297 RQRVDHQGRVQGPVPARRP-ALRLKH 321
>02_05_1131 -
34328168-34328557,34328838-34328957,34329067-34329185,
34329659-34329767,34329847-34329885,34341125-34341203,
34341483-34341547,34341850-34341905,34342141-34342233,
34342312-34342579
Length = 445
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +2
Query: 611 PWFGIEQEYVLLDSDLRPFGWPTTGSPPAQGPYYCGVGANKVFARDLIE 757
P FG+E + L S + G GSP A CGVG + D +E
Sbjct: 84 PQFGLEGQRKLSQSSILVVGAGGLGSPVAMYLAACGVGCLGIVDGDRVE 132
>01_06_1260 - 35820781-35821161,35821163-35821420,35821524-35821976
Length = 363
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -2
Query: 705 GPWAGGLPVVGHPNGLRSESRSTYSCSMPNHGSWSLQRSYASWHL 571
G +GGLP G S S +YS S+P+ ++QRS +S L
Sbjct: 46 GNVSGGLPHFGGAVSSSSSSPPSYSSSLPSSYYNNIQRSISSHSL 90
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,007,318
Number of Sequences: 37544
Number of extensions: 536002
Number of successful extensions: 1526
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1512
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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