Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_J04
(897 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061090-1|AAL28638.1| 90|Drosophila melanogaster LD07775p pro... 178 7e-45
AF218862-1|AAF31702.1| 90|Drosophila melanogaster Smt3 protein. 178 7e-45
AF053083-1|AAD19219.1| 90|Drosophila melanogaster ubiquitin-li... 178 7e-45
AE014134-1209|AAF52470.1| 90|Drosophila melanogaster CG4494-PA... 178 7e-45
AE014134-2678|AAF53505.2| 2190|Drosophila melanogaster CG12455-P... 35 0.13
AY075378-1|AAL68219.1| 163|Drosophila melanogaster LD08233p pro... 30 4.9
AY118950-1|AAM50810.1| 422|Drosophila melanogaster LD33701p pro... 29 8.6
AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends l... 29 8.6
AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP mot... 29 8.6
AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends p... 29 8.6
AE014297-3299|AAF56116.2| 424|Drosophila melanogaster CG4449-PA... 29 8.6
AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,... 29 8.6
AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,... 29 8.6
AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,... 29 8.6
>AY061090-1|AAL28638.1| 90|Drosophila melanogaster LD07775p
protein.
Length = 90
Score = 178 bits (434), Expect = 7e-45
Identities = 84/88 (95%), Positives = 86/88 (97%), Gaps = 1/88 (1%)
Frame = +3
Query: 168 MADEKKG-ENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 344
M+DEKKG E EHINLKVLGQDNA+VQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ
Sbjct: 1 MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 60
Query: 345 PINENDTPTSLEMEEGDTIEVYQQQTGG 428
PINENDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 61 PINENDTPTSLEMEEGDTIEVYQQQTGG 88
>AF218862-1|AAF31702.1| 90|Drosophila melanogaster Smt3 protein.
Length = 90
Score = 178 bits (434), Expect = 7e-45
Identities = 84/88 (95%), Positives = 86/88 (97%), Gaps = 1/88 (1%)
Frame = +3
Query: 168 MADEKKG-ENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 344
M+DEKKG E EHINLKVLGQDNA+VQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ
Sbjct: 1 MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 60
Query: 345 PINENDTPTSLEMEEGDTIEVYQQQTGG 428
PINENDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 61 PINENDTPTSLEMEEGDTIEVYQQQTGG 88
>AF053083-1|AAD19219.1| 90|Drosophila melanogaster ubiquitin-like
protein SMT3 protein.
Length = 90
Score = 178 bits (434), Expect = 7e-45
Identities = 84/88 (95%), Positives = 86/88 (97%), Gaps = 1/88 (1%)
Frame = +3
Query: 168 MADEKKG-ENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 344
M+DEKKG E EHINLKVLGQDNA+VQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ
Sbjct: 1 MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 60
Query: 345 PINENDTPTSLEMEEGDTIEVYQQQTGG 428
PINENDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 61 PINENDTPTSLEMEEGDTIEVYQQQTGG 88
>AE014134-1209|AAF52470.1| 90|Drosophila melanogaster CG4494-PA
protein.
Length = 90
Score = 178 bits (434), Expect = 7e-45
Identities = 84/88 (95%), Positives = 86/88 (97%), Gaps = 1/88 (1%)
Frame = +3
Query: 168 MADEKKG-ENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 344
M+DEKKG E EHINLKVLGQDNA+VQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ
Sbjct: 1 MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 60
Query: 345 PINENDTPTSLEMEEGDTIEVYQQQTGG 428
PINENDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 61 PINENDTPTSLEMEEGDTIEVYQQQTGG 88
>AE014134-2678|AAF53505.2| 2190|Drosophila melanogaster CG12455-PA,
isoform A protein.
Length = 2190
Score = 35.1 bits (77), Expect = 0.13
Identities = 20/83 (24%), Positives = 39/83 (46%)
Frame = -3
Query: 706 STKHITMEIVEVTYSIWYTYNLPYHKLFETHNALRSSAMLLCVTKLLPNTFTDTNDVSLK 527
S KH+ + ++ YS+ N+ T + SS + T + +TF+ T +++
Sbjct: 1727 SLKHLIKILSDLVYSLNDKNNIKSTSQLTTESTFNSSINITNSTTVASSTFSTTESMAIH 1786
Query: 526 LT*G*SLRRVHLIDFDPLEMVNP 458
T S R + + F+ +E +NP
Sbjct: 1787 STPYLSTREITVFQFNDVENINP 1809
>AY075378-1|AAL68219.1| 163|Drosophila melanogaster LD08233p
protein.
Length = 163
Score = 29.9 bits (64), Expect = 4.9
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = -2
Query: 197 FVFSLLFISHFEINVVLETINTKL*IDKLIWYLFSQTNA*MTACAMA 57
F+ + L HFE+ VL + K++W+L ++N + A +A
Sbjct: 88 FIVAALCFYHFELVFVLRVTSRGSSTSKVLWFLIGESNRTLAALVLA 134
>AY118950-1|AAM50810.1| 422|Drosophila melanogaster LD33701p
protein.
Length = 422
Score = 29.1 bits (62), Expect = 8.6
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +3
Query: 315 QVVRFRFDGQPINENDTPTSLEMEEGDTIEV 407
+ ++ FDG ++ NDTP + +ME + I++
Sbjct: 388 RTIKLFFDGDLLDPNDTPNNQDMEGNEVIDL 418
>AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends long
isoform protein.
Length = 5554
Score = 29.1 bits (62), Expect = 8.6
Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = +3
Query: 150 NHINLKMADEKKGENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQV-VR 326
+H + + +K E + Q N I Q K T + + D AG +++ +
Sbjct: 2915 SHADRERHRREKREKKRREKSQREQQNQIHQKSSKVETKVDDDNSVDMDEAGRALEAQLM 2974
Query: 327 FRFDGQPINENDTPTSLEMEEGDTIEVYQ 413
FD +PI+E TP++ D +V++
Sbjct: 2975 SDFDTKPISEEATPSTAATYRSDMTDVFR 3003
>AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP motif
protein long isoformprotein.
Length = 5533
Score = 29.1 bits (62), Expect = 8.6
Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = +3
Query: 150 NHINLKMADEKKGENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQV-VR 326
+H + + +K E + Q N I Q K T + + D AG +++ +
Sbjct: 2921 SHADRERHRREKREKKRREKSQREQQNQIHQKSSKVETKVDDDNSVDMDEAGRALEAQLM 2980
Query: 327 FRFDGQPINENDTPTSLEMEEGDTIEVYQ 413
FD +PI+E TP++ D +V++
Sbjct: 2981 SDFDTKPISEEATPSTAATYRSDMTDVFR 3009
>AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends
protein.
Length = 5476
Score = 29.1 bits (62), Expect = 8.6
Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = +3
Query: 150 NHINLKMADEKKGENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQV-VR 326
+H + + +K E + Q N I Q K T + + D AG +++ +
Sbjct: 2864 SHADRERHRREKREKKRREKSQREQQNQIHQKSSKVETKVDDDNSVDMDEAGRALEAQLM 2923
Query: 327 FRFDGQPINENDTPTSLEMEEGDTIEVYQ 413
FD +PI+E TP++ D +V++
Sbjct: 2924 SDFDTKPISEEATPSTAATYRSDMTDVFR 2952
>AE014297-3299|AAF56116.2| 424|Drosophila melanogaster CG4449-PA
protein.
Length = 424
Score = 29.1 bits (62), Expect = 8.6
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +3
Query: 315 QVVRFRFDGQPINENDTPTSLEMEEGDTIEV 407
+ ++ FDG ++ NDTP + +ME + I++
Sbjct: 390 RTIKLFFDGDLLDPNDTPNNQDMEGNEVIDL 420
>AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,
isoform C protein.
Length = 5476
Score = 29.1 bits (62), Expect = 8.6
Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = +3
Query: 150 NHINLKMADEKKGENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQV-VR 326
+H + + +K E + Q N I Q K T + + D AG +++ +
Sbjct: 2864 SHADRERHRREKREKKRREKSQREQQNQIHQKSSKVETKVDDDNSVDMDEAGRALEAQLM 2923
Query: 327 FRFDGQPINENDTPTSLEMEEGDTIEVYQ 413
FD +PI+E TP++ D +V++
Sbjct: 2924 SDFDTKPISEEATPSTAATYRSDMTDVFR 2952
>AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,
isoform B protein.
Length = 5533
Score = 29.1 bits (62), Expect = 8.6
Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = +3
Query: 150 NHINLKMADEKKGENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQV-VR 326
+H + + +K E + Q N I Q K T + + D AG +++ +
Sbjct: 2921 SHADRERHRREKREKKRREKSQREQQNQIHQKSSKVETKVDDDNSVDMDEAGRALEAQLM 2980
Query: 327 FRFDGQPINENDTPTSLEMEEGDTIEVYQ 413
FD +PI+E TP++ D +V++
Sbjct: 2981 SDFDTKPISEEATPSTAATYRSDMTDVFR 3009
>AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,
isoform A protein.
Length = 5560
Score = 29.1 bits (62), Expect = 8.6
Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = +3
Query: 150 NHINLKMADEKKGENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQV-VR 326
+H + + +K E + Q N I Q K T + + D AG +++ +
Sbjct: 2921 SHADRERHRREKREKKRREKSQREQQNQIHQKSSKVETKVDDDNSVDMDEAGRALEAQLM 2980
Query: 327 FRFDGQPINENDTPTSLEMEEGDTIEVYQ 413
FD +PI+E TP++ D +V++
Sbjct: 2981 SDFDTKPISEEATPSTAATYRSDMTDVFR 3009
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,083,013
Number of Sequences: 53049
Number of extensions: 715829
Number of successful extensions: 1584
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1584
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4362070239
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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