BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_J03
(906 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0568 - 4192514-4192606,4192694-4192753,4192837-4192932,419... 130 1e-30
07_03_1256 - 25237465-25237590,25237833-25237918,25238025-252380... 101 1e-21
11_06_0394 - 23084485-23084577,23084677-23084802,23085134-230852... 82 7e-16
03_03_0187 + 15253000-15253207,15253281-15253370,15254338-152544... 79 6e-15
02_05_0057 + 25472872-25472912,25473012-25473157,25474008-254740... 79 6e-15
08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323 70 3e-12
09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341 69 4e-12
05_05_0306 - 23977543-23977614,23977709-23977799,23978296-239783... 61 1e-09
06_01_0539 + 3869156-3869908 60 3e-09
06_01_0529 + 3831100-3831852 60 3e-09
06_01_0479 + 3419657-3420337 60 3e-09
01_06_1091 + 34464923-34465026,34465124-34465163,34465245-344653... 49 4e-06
02_01_0268 + 1784781-1785056,1787314-1787394,1787395-1787856 43 4e-04
12_01_0355 - 2704909-2705745 30 2.2
08_01_0894 - 8797302-8797355,8798393-8799082,8799201-8799315,879... 29 5.1
04_01_0097 - 998766-999383,999479-999861,1000021-1000398,1000486... 29 5.1
09_03_0181 + 13149531-13149601,13150772-13151126,13152527-131526... 28 8.9
06_03_0673 + 23394027-23394094,23394267-23394539,23394613-233949... 28 8.9
>03_01_0568 -
4192514-4192606,4192694-4192753,4192837-4192932,
4193088-4193170,4193289-4193347,4193463-4193559,
4194151-4194232,4194353-4194447,4194585-4194660
Length = 246
Score = 130 bits (315), Expect = 1e-30
Identities = 69/166 (41%), Positives = 99/166 (59%)
Frame = +1
Query: 235 GLTSVALRGTDAAVVAAQRKVPDRLLDPVSVTHLFALTDRIGCVMTGMIADSRSQVQRAR 414
G+TS+ +RG D+ V Q+KVPD+LLD SVTHLF +T IG + TG+ AD+RS V +AR
Sbjct: 36 GVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYIGLLATGLTADARSLVYQAR 95
Query: 415 YEAANWQYKYGSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYDDEAGALCVQNR 594
EAA +++K+G E+PV +L + IAD +QVYTQ+A MRPLG M++ YD+E A +
Sbjct: 96 NEAAEFRFKWGYEMPVDVLAKWIADKAQVYTQHAYMRPLGVVAMVLGYDEEKNAQLFKCD 155
Query: 595 PXXXXXXXXXXXXXXXXXXMETLISKRN*KKRSDLSTDDAIQLAIS 732
P + K+ K S ++ +Q+AIS
Sbjct: 156 PAGHFFGHKATSAGLKEQEAINFLEKKM-KDDPQFSYEETVQIAIS 200
Score = 61.7 bits (143), Expect = 8e-10
Identities = 27/42 (64%), Positives = 32/42 (76%)
Frame = +3
Query: 129 MARESSAGFDRHITIFSPEGRLYQVEYALKAINQGWVDICGI 254
M+R + AG+DRHITIFSPEGRLYQVEYA KA+ V G+
Sbjct: 1 MSRGTGAGYDRHITIFSPEGRLYQVEYAFKAVKSAGVTSIGV 42
Score = 34.7 bits (76), Expect = 0.10
Identities = 18/33 (54%), Positives = 21/33 (63%)
Frame = +2
Query: 737 LXQVLSVDFKSSEIEIGVVSXDILRFRVLTELE 835
L VL DFK++EIE+GVV D FR LT E
Sbjct: 202 LQSVLQEDFKATEIEVGVVRKDDRVFRALTTEE 234
>07_03_1256 -
25237465-25237590,25237833-25237918,25238025-25238083,
25238516-25238612,25239582-25239663,25239752-25240096
Length = 264
Score = 101 bits (241), Expect = 1e-21
Identities = 50/113 (44%), Positives = 75/113 (66%)
Frame = +1
Query: 235 GLTSVALRGTDAAVVAAQRKVPDRLLDPVSVTHLFALTDRIGCVMTGMIADSRSQVQRAR 414
G+TSV +RG D+ V RK D+L DP ++T+LFA+TDRIG + TGM D R+ Q AR
Sbjct: 95 GITSVGVRGDDSVYVLTHRK-EDKLHDPTTITNLFAITDRIGLLATGMPGDGRAIAQEAR 153
Query: 415 YEAANWQYKYGSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYDDEAG 573
AA +++K+G ++ +L + IAD +Q+ TQ+A++RP G M+ D+E G
Sbjct: 154 NAAAEFRFKWGYKMSPCMLAQWIADRAQIRTQHAQIRPYGVVSMIFGIDEEKG 206
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +3
Query: 147 AGFDRHITIFSPEGRLYQV 203
A ++R IT+FSPEGRL Q+
Sbjct: 21 ADYERFITLFSPEGRLCQL 39
>11_06_0394 -
23084485-23084577,23084677-23084802,23085134-23085236,
23085895-23085953,23086418-23086519,23086601-23086714,
23087666-23087746,23088073-23088154,23088504-23088556
Length = 270
Score = 81.8 bits (193), Expect = 7e-16
Identities = 38/120 (31%), Positives = 70/120 (58%), Gaps = 3/120 (2%)
Frame = +1
Query: 229 RVGLTSVALRGTDAAVVAAQRKVPDRLLDPVSVTHLFALTDRIGCVMTGMIADSRSQVQR 408
++G T++ L+ D V+A +++V LL+P SV + + + IGC M+G+IAD+R+ V+
Sbjct: 45 KLGSTAIGLKTKDGVVLAVEKRVTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEH 104
Query: 409 ARYEAANWQYKYGSEIPVHILCRRIADISQVYTQNAE---MRPLGCSMMLIAYDDEAGAL 579
AR E N ++ YG + V + I D++ + + E RP G S+++ +D+ +L
Sbjct: 105 ARVETQNHRFSYGEPMTVESTTQAICDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSL 164
Score = 41.9 bits (94), Expect = 7e-04
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = +3
Query: 153 FDRHITIFSPEGRLYQVEYALKAINQG 233
+DR + FSPEGRL+QVEYA++AI G
Sbjct: 21 YDRGVNTFSPEGRLFQVEYAIEAIKLG 47
>03_03_0187 +
15253000-15253207,15253281-15253370,15254338-15254402,
15254489-15254535,15255195-15255270,15255432-15255499,
15255793-15255862,15256024-15256109,15256328-15256390,
15256472-15256537,15256938-15256986
Length = 295
Score = 78.6 bits (185), Expect = 6e-15
Identities = 50/155 (32%), Positives = 74/155 (47%)
Frame = +1
Query: 265 DAAVVAAQRKVPDRLLDPVSVTHLFALTDRIGCVMTGMIADSRSQVQRARYEAANWQYKY 444
+ V+A ++K+P L+D SV + +LT IG V +GM D R V+++R +A + Y
Sbjct: 102 NGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLY 161
Query: 445 GSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYDDEAGALCVQNRPXXXXXXXXX 624
IPV L R A + Q +TQ+ +RP G S+++ YDD G Q P
Sbjct: 162 KETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDN-GPQLYQVDPSGSYFSWKA 220
Query: 625 XXXXXXXXXMETLISKRN*KKRSDLSTDDAIQLAI 729
+T + KR D+ DDAI AI
Sbjct: 221 SAMGKNVSNAKTFLEKR---YTEDMELDDAIHTAI 252
>02_05_0057 +
25472872-25472912,25473012-25473157,25474008-25474072,
25474182-25474228,25474922-25474997,25475176-25475243,
25475862-25475931,25476178-25476263,25476418-25476480,
25476556-25476621,25476740-25476788
Length = 258
Score = 78.6 bits (185), Expect = 6e-15
Identities = 50/155 (32%), Positives = 74/155 (47%)
Frame = +1
Query: 265 DAAVVAAQRKVPDRLLDPVSVTHLFALTDRIGCVMTGMIADSRSQVQRARYEAANWQYKY 444
+ V+A ++K+P L+D SV + +LT IG V +GM D R V+++R +A + Y
Sbjct: 65 NGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLY 124
Query: 445 GSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYDDEAGALCVQNRPXXXXXXXXX 624
IPV L R A + Q +TQ+ +RP G S+++ YDD G Q P
Sbjct: 125 KETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDN-GPQLYQVDPSGSYFSWKA 183
Query: 625 XXXXXXXXXMETLISKRN*KKRSDLSTDDAIQLAI 729
+T + KR D+ DDAI AI
Sbjct: 184 SAMGKNVSNAKTFLEKR---YTEDMELDDAIHTAI 215
Score = 31.9 bits (69), Expect = 0.72
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 165 ITIFSPEGRLYQVEYALKAINQG 233
+T FSP G+L Q+E+AL A+ G
Sbjct: 10 LTTFSPSGKLVQIEHALTAVGSG 32
>08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323
Length = 319
Score = 69.7 bits (163), Expect = 3e-12
Identities = 35/111 (31%), Positives = 58/111 (52%)
Frame = +1
Query: 229 RVGLTSVALRGTDAAVVAAQRKVPDRLLDPVSVTHLFALTDRIGCVMTGMIADSRSQVQR 408
R G +V +RGTD V+ ++K +L D S+ + +L I G+ AD+R + R
Sbjct: 98 RKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSMRKIASLDTHIALACAGLKADARVLINR 157
Query: 409 ARYEAANWQYKYGSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYD 561
AR E + + + V + R IA + Q YTQ+ +RP G S +++ +D
Sbjct: 158 ARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFD 208
Score = 45.2 bits (102), Expect = 7e-05
Identities = 18/29 (62%), Positives = 25/29 (86%)
Frame = +3
Query: 147 AGFDRHITIFSPEGRLYQVEYALKAINQG 233
A +DR IT+FSP+G L+QVEYAL+A+ +G
Sbjct: 72 ARYDRAITVFSPDGHLFQVEYALEAVRKG 100
>09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341
Length = 249
Score = 69.3 bits (162), Expect = 4e-12
Identities = 35/111 (31%), Positives = 58/111 (52%)
Frame = +1
Query: 229 RVGLTSVALRGTDAAVVAAQRKVPDRLLDPVSVTHLFALTDRIGCVMTGMIADSRSQVQR 408
R G +V +RG+D V+ ++K +L D SV + +L I G+ AD+R + R
Sbjct: 28 RKGNAAVGVRGSDTVVLGVEKKSTPKLQDSRSVRKIASLDTHIALACAGLKADARVLINR 87
Query: 409 ARYEAANWQYKYGSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYD 561
AR E + + + V + R IA + Q YTQ+ +RP G S +++ +D
Sbjct: 88 ARVECQSHRLTVEDAVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFD 138
Score = 45.2 bits (102), Expect = 7e-05
Identities = 18/29 (62%), Positives = 25/29 (86%)
Frame = +3
Query: 147 AGFDRHITIFSPEGRLYQVEYALKAINQG 233
A +DR IT+FSP+G L+QVEYAL+A+ +G
Sbjct: 2 ARYDRAITVFSPDGHLFQVEYALEAVRKG 30
>05_05_0306 -
23977543-23977614,23977709-23977799,23978296-23978361,
23978399-23978479,23979130-23979176,23979408-23979492,
23979570-23979656,23979728-23979801,23980083-23980166,
23980259-23980298,23980386-23980489
Length = 276
Score = 60.9 bits (141), Expect = 1e-09
Identities = 34/113 (30%), Positives = 57/113 (50%)
Frame = +1
Query: 241 TSVALRGTDAAVVAAQRKVPDRLLDPVSVTHLFALTDRIGCVMTGMIADSRSQVQRARYE 420
T V ++ D V+ ++ V +++ S L ++ G + G+ AD R V RA+ E
Sbjct: 36 TVVGIKCKDGIVLGVEKLVTSKMILKGSNRRLHSVHRHSGLAVAGLAADGRQIVSRAKSE 95
Query: 421 AANWQYKYGSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYDDEAGAL 579
AA+++ YG +PV L R+A + T +RP GC ++L YD + L
Sbjct: 96 AASYEKVYGEPMPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQL 148
Score = 39.9 bits (89), Expect = 0.003
Identities = 18/31 (58%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Frame = +3
Query: 150 GFDRHITIFSPEGRLYQVEYALKAI-NQGWV 239
G+D +T FSP+GR++QVEYA KA+ N G V
Sbjct: 7 GYDLSVTTFSPDGRVFQVEYAGKAVDNSGTV 37
>06_01_0539 + 3869156-3869908
Length = 250
Score = 59.7 bits (138), Expect = 3e-09
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Frame = +1
Query: 241 TSVALRGTDAAVVAAQRKVPDRLLDPV-SVTHLFALTDRIGCVMTGMIADSRSQVQRARY 417
+++ + D V+ ++KV +LL S ++ + + C + G+++D+ + AR
Sbjct: 33 SALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARL 92
Query: 418 EAANWQYKYGSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYDDEAG 573
A + Y IPV L + + D Q YTQ +RP G S + +D G
Sbjct: 93 HAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHG 144
Score = 43.2 bits (97), Expect = 3e-04
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = +3
Query: 144 SAGFDRHITIFSPEGRLYQVEYALKAI 224
S +D TIFSPEGRLYQVEYA++AI
Sbjct: 2 SRRYDSRTTIFSPEGRLYQVEYAMEAI 28
>06_01_0529 + 3831100-3831852
Length = 250
Score = 59.7 bits (138), Expect = 3e-09
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Frame = +1
Query: 241 TSVALRGTDAAVVAAQRKVPDRLLDPV-SVTHLFALTDRIGCVMTGMIADSRSQVQRARY 417
+++ + D V+ ++KV +LL S ++ + + C + G+++D+ + AR
Sbjct: 33 SALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARL 92
Query: 418 EAANWQYKYGSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYDDEAG 573
A + Y IPV L + + D Q YTQ +RP G S + +D G
Sbjct: 93 HAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHG 144
Score = 43.2 bits (97), Expect = 3e-04
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = +3
Query: 144 SAGFDRHITIFSPEGRLYQVEYALKAI 224
S +D TIFSPEGRLYQVEYA++AI
Sbjct: 2 SRRYDSRTTIFSPEGRLYQVEYAMEAI 28
>06_01_0479 + 3419657-3420337
Length = 226
Score = 59.7 bits (138), Expect = 3e-09
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Frame = +1
Query: 241 TSVALRGTDAAVVAAQRKVPDRLLDPV-SVTHLFALTDRIGCVMTGMIADSRSQVQRARY 417
+++ + D V+ ++KV +LL S ++ + + C + G+++D+ + AR
Sbjct: 9 SALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARL 68
Query: 418 EAANWQYKYGSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYDDEAG 573
A + Y IPV L + + D Q YTQ +RP G S + +D G
Sbjct: 69 HAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHG 120
>01_06_1091 +
34464923-34465026,34465124-34465163,34465245-34465328,
34465457-34465480,34465582-34465655,34465726-34465812,
34465922-34466006,34466215-34466261,34467048-34467113,
34468307-34468397,34468477-34468548
Length = 257
Score = 49.2 bits (112), Expect = 4e-06
Identities = 26/71 (36%), Positives = 38/71 (53%)
Frame = +1
Query: 367 MTGMIADSRSQVQRARYEAANWQYKYGSEIPVHILCRRIADISQVYTQNAEMRPLGCSMM 546
+ G+ AD R V RA+ EAA+++ YG I V L R+A + T +RP GC ++
Sbjct: 86 VAGLAADGRQIVSRAKSEAASYEKVYGEPISVKELADRVASYVHLCTLYWWLRPFGCGVI 145
Query: 547 LIAYDDEAGAL 579
L YD + L
Sbjct: 146 LGGYDRDGPQL 156
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/31 (58%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Frame = +3
Query: 150 GFDRHITIFSPEGRLYQVEYALKAI-NQGWV 239
G+D +T FSP+GR++QVEYA KA+ N G V
Sbjct: 7 GYDLSVTTFSPDGRVFQVEYATKAVDNSGTV 37
>02_01_0268 + 1784781-1785056,1787314-1787394,1787395-1787856
Length = 272
Score = 42.7 bits (96), Expect = 4e-04
Identities = 28/88 (31%), Positives = 39/88 (44%)
Frame = +1
Query: 235 GLTSVALRGTDAAVVAAQRKVPDRLLDPVSVTHLFALTDRIGCVMTGMIADSRSQVQRAR 414
G V LR AV+AA K L +F + D G + G+ AD R + R
Sbjct: 7 GSACVGLRSRTHAVLAAANKAASELSS--HQRKVFRVADHAGVALAGLTADGRVLSRFLR 64
Query: 415 YEAANWQYKYGSEIPVHILCRRIADISQ 498
E N + Y + +PV L R+AD +Q
Sbjct: 65 SECINHAFVYDAPLPVSRLALRLADKAQ 92
>12_01_0355 - 2704909-2705745
Length = 278
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 519 DETSGLQYDADSVRR*SRGPVCTKQTPPATTAPIKAVAAGAK 644
+ET G++ D D R RG TPP PI+++ G K
Sbjct: 155 EETDGVEED-DGAGREKRGTPTLAPTPPTFPPPIRSIGRGGK 195
>08_01_0894 -
8797302-8797355,8798393-8799082,8799201-8799315,
8799955-8800082
Length = 328
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -1
Query: 804 ISLLTTPISISEDLKSTDNT*XRPGDGKLNRIIGA 700
++ L+ P +S+D K DNT P K N +IGA
Sbjct: 150 VAFLSAPAQLSQDTKKRDNTYHSPSKQK-NALIGA 183
>04_01_0097 -
998766-999383,999479-999861,1000021-1000398,
1000486-1000711,1000799-1001323,1003032-1003164,
1004353-1004435,1004645-1005349,1005483-1005556,
1006290-1006392,1006485-1006727
Length = 1156
Score = 29.1 bits (62), Expect = 5.1
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Frame = +1
Query: 253 LRGTDAAV--VAAQRKVPDRLLDPVSVTHLFALTDRIGCVMTGMIADSRSQVQRARYEAA 426
LR T A V + A+R D L V + H F + R+G + + + ++ R RYEAA
Sbjct: 40 LRKTQAQVEELVAER---DHLAAFVKIQHDF-MVSRVGRLQSSLQQARKADAIRKRYEAA 95
Query: 427 NWQYKYGSEIPVHILCRRIADISQ 498
N + G + ++IA++++
Sbjct: 96 NMEILIGDKEREARSYQKIAELTE 119
>09_03_0181 +
13149531-13149601,13150772-13151126,13152527-13152634,
13152698-13152775,13154828-13154915,13156777-13157177
Length = 366
Score = 28.3 bits (60), Expect = 8.9
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = -3
Query: 499 LERYQLCVCIRYAQVSQTHTCTASWQPR 416
++++ L C+ YA + TC+ SW+ R
Sbjct: 231 IDQHNLAECLDYANMQVAGTCSCSWKHR 258
>06_03_0673 +
23394027-23394094,23394267-23394539,23394613-23394958,
23395031-23395168,23395260-23395385,23395464-23395652,
23395723-23396202,23396274-23397236
Length = 860
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3
Query: 619 IGAVVAGGVCFVHTGPRLHRRTLSASYCNP 530
IG + GGV TG R+H R S++YC+P
Sbjct: 541 IGWMYGGGVA---TGFRMHARGWSSAYCSP 567
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,814,239
Number of Sequences: 37544
Number of extensions: 390910
Number of successful extensions: 1031
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1029
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -