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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_J03
         (906 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0568 - 4192514-4192606,4192694-4192753,4192837-4192932,419...   130   1e-30
07_03_1256 - 25237465-25237590,25237833-25237918,25238025-252380...   101   1e-21
11_06_0394 - 23084485-23084577,23084677-23084802,23085134-230852...    82   7e-16
03_03_0187 + 15253000-15253207,15253281-15253370,15254338-152544...    79   6e-15
02_05_0057 + 25472872-25472912,25473012-25473157,25474008-254740...    79   6e-15
08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323     70   3e-12
09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341     69   4e-12
05_05_0306 - 23977543-23977614,23977709-23977799,23978296-239783...    61   1e-09
06_01_0539 + 3869156-3869908                                           60   3e-09
06_01_0529 + 3831100-3831852                                           60   3e-09
06_01_0479 + 3419657-3420337                                           60   3e-09
01_06_1091 + 34464923-34465026,34465124-34465163,34465245-344653...    49   4e-06
02_01_0268 + 1784781-1785056,1787314-1787394,1787395-1787856           43   4e-04
12_01_0355 - 2704909-2705745                                           30   2.2  
08_01_0894 - 8797302-8797355,8798393-8799082,8799201-8799315,879...    29   5.1  
04_01_0097 - 998766-999383,999479-999861,1000021-1000398,1000486...    29   5.1  
09_03_0181 + 13149531-13149601,13150772-13151126,13152527-131526...    28   8.9  
06_03_0673 + 23394027-23394094,23394267-23394539,23394613-233949...    28   8.9  

>03_01_0568 -
           4192514-4192606,4192694-4192753,4192837-4192932,
           4193088-4193170,4193289-4193347,4193463-4193559,
           4194151-4194232,4194353-4194447,4194585-4194660
          Length = 246

 Score =  130 bits (315), Expect = 1e-30
 Identities = 69/166 (41%), Positives = 99/166 (59%)
 Frame = +1

Query: 235 GLTSVALRGTDAAVVAAQRKVPDRLLDPVSVTHLFALTDRIGCVMTGMIADSRSQVQRAR 414
           G+TS+ +RG D+  V  Q+KVPD+LLD  SVTHLF +T  IG + TG+ AD+RS V +AR
Sbjct: 36  GVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYIGLLATGLTADARSLVYQAR 95

Query: 415 YEAANWQYKYGSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYDDEAGALCVQNR 594
            EAA +++K+G E+PV +L + IAD +QVYTQ+A MRPLG   M++ YD+E  A   +  
Sbjct: 96  NEAAEFRFKWGYEMPVDVLAKWIADKAQVYTQHAYMRPLGVVAMVLGYDEEKNAQLFKCD 155

Query: 595 PXXXXXXXXXXXXXXXXXXMETLISKRN*KKRSDLSTDDAIQLAIS 732
           P                      + K+  K     S ++ +Q+AIS
Sbjct: 156 PAGHFFGHKATSAGLKEQEAINFLEKKM-KDDPQFSYEETVQIAIS 200



 Score = 61.7 bits (143), Expect = 8e-10
 Identities = 27/42 (64%), Positives = 32/42 (76%)
 Frame = +3

Query: 129 MARESSAGFDRHITIFSPEGRLYQVEYALKAINQGWVDICGI 254
           M+R + AG+DRHITIFSPEGRLYQVEYA KA+    V   G+
Sbjct: 1   MSRGTGAGYDRHITIFSPEGRLYQVEYAFKAVKSAGVTSIGV 42



 Score = 34.7 bits (76), Expect = 0.10
 Identities = 18/33 (54%), Positives = 21/33 (63%)
 Frame = +2

Query: 737 LXQVLSVDFKSSEIEIGVVSXDILRFRVLTELE 835
           L  VL  DFK++EIE+GVV  D   FR LT  E
Sbjct: 202 LQSVLQEDFKATEIEVGVVRKDDRVFRALTTEE 234


>07_03_1256 -
           25237465-25237590,25237833-25237918,25238025-25238083,
           25238516-25238612,25239582-25239663,25239752-25240096
          Length = 264

 Score =  101 bits (241), Expect = 1e-21
 Identities = 50/113 (44%), Positives = 75/113 (66%)
 Frame = +1

Query: 235 GLTSVALRGTDAAVVAAQRKVPDRLLDPVSVTHLFALTDRIGCVMTGMIADSRSQVQRAR 414
           G+TSV +RG D+  V   RK  D+L DP ++T+LFA+TDRIG + TGM  D R+  Q AR
Sbjct: 95  GITSVGVRGDDSVYVLTHRK-EDKLHDPTTITNLFAITDRIGLLATGMPGDGRAIAQEAR 153

Query: 415 YEAANWQYKYGSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYDDEAG 573
             AA +++K+G ++   +L + IAD +Q+ TQ+A++RP G   M+   D+E G
Sbjct: 154 NAAAEFRFKWGYKMSPCMLAQWIADRAQIRTQHAQIRPYGVVSMIFGIDEEKG 206



 Score = 29.9 bits (64), Expect = 2.9
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = +3

Query: 147 AGFDRHITIFSPEGRLYQV 203
           A ++R IT+FSPEGRL Q+
Sbjct: 21  ADYERFITLFSPEGRLCQL 39


>11_06_0394 -
           23084485-23084577,23084677-23084802,23085134-23085236,
           23085895-23085953,23086418-23086519,23086601-23086714,
           23087666-23087746,23088073-23088154,23088504-23088556
          Length = 270

 Score = 81.8 bits (193), Expect = 7e-16
 Identities = 38/120 (31%), Positives = 70/120 (58%), Gaps = 3/120 (2%)
 Frame = +1

Query: 229 RVGLTSVALRGTDAAVVAAQRKVPDRLLDPVSVTHLFALTDRIGCVMTGMIADSRSQVQR 408
           ++G T++ L+  D  V+A +++V   LL+P SV  +  + + IGC M+G+IAD+R+ V+ 
Sbjct: 45  KLGSTAIGLKTKDGVVLAVEKRVTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEH 104

Query: 409 ARYEAANWQYKYGSEIPVHILCRRIADISQVYTQNAE---MRPLGCSMMLIAYDDEAGAL 579
           AR E  N ++ YG  + V    + I D++  + +  E    RP G S+++  +D+   +L
Sbjct: 105 ARVETQNHRFSYGEPMTVESTTQAICDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSL 164



 Score = 41.9 bits (94), Expect = 7e-04
 Identities = 17/27 (62%), Positives = 22/27 (81%)
 Frame = +3

Query: 153 FDRHITIFSPEGRLYQVEYALKAINQG 233
           +DR +  FSPEGRL+QVEYA++AI  G
Sbjct: 21  YDRGVNTFSPEGRLFQVEYAIEAIKLG 47


>03_03_0187 +
           15253000-15253207,15253281-15253370,15254338-15254402,
           15254489-15254535,15255195-15255270,15255432-15255499,
           15255793-15255862,15256024-15256109,15256328-15256390,
           15256472-15256537,15256938-15256986
          Length = 295

 Score = 78.6 bits (185), Expect = 6e-15
 Identities = 50/155 (32%), Positives = 74/155 (47%)
 Frame = +1

Query: 265 DAAVVAAQRKVPDRLLDPVSVTHLFALTDRIGCVMTGMIADSRSQVQRARYEAANWQYKY 444
           +  V+A ++K+P  L+D  SV  + +LT  IG V +GM  D R  V+++R +A  +   Y
Sbjct: 102 NGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLY 161

Query: 445 GSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYDDEAGALCVQNRPXXXXXXXXX 624
              IPV  L R  A + Q +TQ+  +RP G S+++  YDD  G    Q  P         
Sbjct: 162 KETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDN-GPQLYQVDPSGSYFSWKA 220

Query: 625 XXXXXXXXXMETLISKRN*KKRSDLSTDDAIQLAI 729
                     +T + KR      D+  DDAI  AI
Sbjct: 221 SAMGKNVSNAKTFLEKR---YTEDMELDDAIHTAI 252


>02_05_0057 +
           25472872-25472912,25473012-25473157,25474008-25474072,
           25474182-25474228,25474922-25474997,25475176-25475243,
           25475862-25475931,25476178-25476263,25476418-25476480,
           25476556-25476621,25476740-25476788
          Length = 258

 Score = 78.6 bits (185), Expect = 6e-15
 Identities = 50/155 (32%), Positives = 74/155 (47%)
 Frame = +1

Query: 265 DAAVVAAQRKVPDRLLDPVSVTHLFALTDRIGCVMTGMIADSRSQVQRARYEAANWQYKY 444
           +  V+A ++K+P  L+D  SV  + +LT  IG V +GM  D R  V+++R +A  +   Y
Sbjct: 65  NGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLY 124

Query: 445 GSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYDDEAGALCVQNRPXXXXXXXXX 624
              IPV  L R  A + Q +TQ+  +RP G S+++  YDD  G    Q  P         
Sbjct: 125 KETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDN-GPQLYQVDPSGSYFSWKA 183

Query: 625 XXXXXXXXXMETLISKRN*KKRSDLSTDDAIQLAI 729
                     +T + KR      D+  DDAI  AI
Sbjct: 184 SAMGKNVSNAKTFLEKR---YTEDMELDDAIHTAI 215



 Score = 31.9 bits (69), Expect = 0.72
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +3

Query: 165 ITIFSPEGRLYQVEYALKAINQG 233
           +T FSP G+L Q+E+AL A+  G
Sbjct: 10  LTTFSPSGKLVQIEHALTAVGSG 32


>08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323
          Length = 319

 Score = 69.7 bits (163), Expect = 3e-12
 Identities = 35/111 (31%), Positives = 58/111 (52%)
 Frame = +1

Query: 229 RVGLTSVALRGTDAAVVAAQRKVPDRLLDPVSVTHLFALTDRIGCVMTGMIADSRSQVQR 408
           R G  +V +RGTD  V+  ++K   +L D  S+  + +L   I     G+ AD+R  + R
Sbjct: 98  RKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSMRKIASLDTHIALACAGLKADARVLINR 157

Query: 409 ARYEAANWQYKYGSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYD 561
           AR E  + +      + V  + R IA + Q YTQ+  +RP G S +++ +D
Sbjct: 158 ARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFD 208



 Score = 45.2 bits (102), Expect = 7e-05
 Identities = 18/29 (62%), Positives = 25/29 (86%)
 Frame = +3

Query: 147 AGFDRHITIFSPEGRLYQVEYALKAINQG 233
           A +DR IT+FSP+G L+QVEYAL+A+ +G
Sbjct: 72  ARYDRAITVFSPDGHLFQVEYALEAVRKG 100


>09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341
          Length = 249

 Score = 69.3 bits (162), Expect = 4e-12
 Identities = 35/111 (31%), Positives = 58/111 (52%)
 Frame = +1

Query: 229 RVGLTSVALRGTDAAVVAAQRKVPDRLLDPVSVTHLFALTDRIGCVMTGMIADSRSQVQR 408
           R G  +V +RG+D  V+  ++K   +L D  SV  + +L   I     G+ AD+R  + R
Sbjct: 28  RKGNAAVGVRGSDTVVLGVEKKSTPKLQDSRSVRKIASLDTHIALACAGLKADARVLINR 87

Query: 409 ARYEAANWQYKYGSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYD 561
           AR E  + +      + V  + R IA + Q YTQ+  +RP G S +++ +D
Sbjct: 88  ARVECQSHRLTVEDAVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFD 138



 Score = 45.2 bits (102), Expect = 7e-05
 Identities = 18/29 (62%), Positives = 25/29 (86%)
 Frame = +3

Query: 147 AGFDRHITIFSPEGRLYQVEYALKAINQG 233
           A +DR IT+FSP+G L+QVEYAL+A+ +G
Sbjct: 2   ARYDRAITVFSPDGHLFQVEYALEAVRKG 30


>05_05_0306 -
           23977543-23977614,23977709-23977799,23978296-23978361,
           23978399-23978479,23979130-23979176,23979408-23979492,
           23979570-23979656,23979728-23979801,23980083-23980166,
           23980259-23980298,23980386-23980489
          Length = 276

 Score = 60.9 bits (141), Expect = 1e-09
 Identities = 34/113 (30%), Positives = 57/113 (50%)
 Frame = +1

Query: 241 TSVALRGTDAAVVAAQRKVPDRLLDPVSVTHLFALTDRIGCVMTGMIADSRSQVQRARYE 420
           T V ++  D  V+  ++ V  +++   S   L ++    G  + G+ AD R  V RA+ E
Sbjct: 36  TVVGIKCKDGIVLGVEKLVTSKMILKGSNRRLHSVHRHSGLAVAGLAADGRQIVSRAKSE 95

Query: 421 AANWQYKYGSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYDDEAGAL 579
           AA+++  YG  +PV  L  R+A    + T    +RP GC ++L  YD +   L
Sbjct: 96  AASYEKVYGEPMPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQL 148



 Score = 39.9 bits (89), Expect = 0.003
 Identities = 18/31 (58%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
 Frame = +3

Query: 150 GFDRHITIFSPEGRLYQVEYALKAI-NQGWV 239
           G+D  +T FSP+GR++QVEYA KA+ N G V
Sbjct: 7   GYDLSVTTFSPDGRVFQVEYAGKAVDNSGTV 37


>06_01_0539 + 3869156-3869908
          Length = 250

 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
 Frame = +1

Query: 241 TSVALRGTDAAVVAAQRKVPDRLLDPV-SVTHLFALTDRIGCVMTGMIADSRSQVQRARY 417
           +++ +   D  V+  ++KV  +LL    S   ++ +   + C + G+++D+   +  AR 
Sbjct: 33  SALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARL 92

Query: 418 EAANWQYKYGSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYDDEAG 573
            A  +   Y   IPV  L + + D  Q YTQ   +RP G S +   +D   G
Sbjct: 93  HAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHG 144



 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 19/27 (70%), Positives = 22/27 (81%)
 Frame = +3

Query: 144 SAGFDRHITIFSPEGRLYQVEYALKAI 224
           S  +D   TIFSPEGRLYQVEYA++AI
Sbjct: 2   SRRYDSRTTIFSPEGRLYQVEYAMEAI 28


>06_01_0529 + 3831100-3831852
          Length = 250

 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
 Frame = +1

Query: 241 TSVALRGTDAAVVAAQRKVPDRLLDPV-SVTHLFALTDRIGCVMTGMIADSRSQVQRARY 417
           +++ +   D  V+  ++KV  +LL    S   ++ +   + C + G+++D+   +  AR 
Sbjct: 33  SALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARL 92

Query: 418 EAANWQYKYGSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYDDEAG 573
            A  +   Y   IPV  L + + D  Q YTQ   +RP G S +   +D   G
Sbjct: 93  HAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHG 144



 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 19/27 (70%), Positives = 22/27 (81%)
 Frame = +3

Query: 144 SAGFDRHITIFSPEGRLYQVEYALKAI 224
           S  +D   TIFSPEGRLYQVEYA++AI
Sbjct: 2   SRRYDSRTTIFSPEGRLYQVEYAMEAI 28


>06_01_0479 + 3419657-3420337
          Length = 226

 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
 Frame = +1

Query: 241 TSVALRGTDAAVVAAQRKVPDRLLDPV-SVTHLFALTDRIGCVMTGMIADSRSQVQRARY 417
           +++ +   D  V+  ++KV  +LL    S   ++ +   + C + G+++D+   +  AR 
Sbjct: 9   SALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARL 68

Query: 418 EAANWQYKYGSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYDDEAG 573
            A  +   Y   IPV  L + + D  Q YTQ   +RP G S +   +D   G
Sbjct: 69  HAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHG 120


>01_06_1091 +
           34464923-34465026,34465124-34465163,34465245-34465328,
           34465457-34465480,34465582-34465655,34465726-34465812,
           34465922-34466006,34466215-34466261,34467048-34467113,
           34468307-34468397,34468477-34468548
          Length = 257

 Score = 49.2 bits (112), Expect = 4e-06
 Identities = 26/71 (36%), Positives = 38/71 (53%)
 Frame = +1

Query: 367 MTGMIADSRSQVQRARYEAANWQYKYGSEIPVHILCRRIADISQVYTQNAEMRPLGCSMM 546
           + G+ AD R  V RA+ EAA+++  YG  I V  L  R+A    + T    +RP GC ++
Sbjct: 86  VAGLAADGRQIVSRAKSEAASYEKVYGEPISVKELADRVASYVHLCTLYWWLRPFGCGVI 145

Query: 547 LIAYDDEAGAL 579
           L  YD +   L
Sbjct: 146 LGGYDRDGPQL 156



 Score = 41.1 bits (92), Expect = 0.001
 Identities = 18/31 (58%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
 Frame = +3

Query: 150 GFDRHITIFSPEGRLYQVEYALKAI-NQGWV 239
           G+D  +T FSP+GR++QVEYA KA+ N G V
Sbjct: 7   GYDLSVTTFSPDGRVFQVEYATKAVDNSGTV 37


>02_01_0268 + 1784781-1785056,1787314-1787394,1787395-1787856
          Length = 272

 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 28/88 (31%), Positives = 39/88 (44%)
 Frame = +1

Query: 235 GLTSVALRGTDAAVVAAQRKVPDRLLDPVSVTHLFALTDRIGCVMTGMIADSRSQVQRAR 414
           G   V LR    AV+AA  K    L        +F + D  G  + G+ AD R   +  R
Sbjct: 7   GSACVGLRSRTHAVLAAANKAASELSS--HQRKVFRVADHAGVALAGLTADGRVLSRFLR 64

Query: 415 YEAANWQYKYGSEIPVHILCRRIADISQ 498
            E  N  + Y + +PV  L  R+AD +Q
Sbjct: 65  SECINHAFVYDAPLPVSRLALRLADKAQ 92


>12_01_0355 - 2704909-2705745
          Length = 278

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +3

Query: 519 DETSGLQYDADSVRR*SRGPVCTKQTPPATTAPIKAVAAGAK 644
           +ET G++ D D   R  RG      TPP    PI+++  G K
Sbjct: 155 EETDGVEED-DGAGREKRGTPTLAPTPPTFPPPIRSIGRGGK 195


>08_01_0894 -
           8797302-8797355,8798393-8799082,8799201-8799315,
           8799955-8800082
          Length = 328

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -1

Query: 804 ISLLTTPISISEDLKSTDNT*XRPGDGKLNRIIGA 700
           ++ L+ P  +S+D K  DNT   P   K N +IGA
Sbjct: 150 VAFLSAPAQLSQDTKKRDNTYHSPSKQK-NALIGA 183


>04_01_0097 -
           998766-999383,999479-999861,1000021-1000398,
           1000486-1000711,1000799-1001323,1003032-1003164,
           1004353-1004435,1004645-1005349,1005483-1005556,
           1006290-1006392,1006485-1006727
          Length = 1156

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
 Frame = +1

Query: 253 LRGTDAAV--VAAQRKVPDRLLDPVSVTHLFALTDRIGCVMTGMIADSRSQVQRARYEAA 426
           LR T A V  + A+R   D L   V + H F +  R+G + + +    ++   R RYEAA
Sbjct: 40  LRKTQAQVEELVAER---DHLAAFVKIQHDF-MVSRVGRLQSSLQQARKADAIRKRYEAA 95

Query: 427 NWQYKYGSEIPVHILCRRIADISQ 498
           N +   G +       ++IA++++
Sbjct: 96  NMEILIGDKEREARSYQKIAELTE 119


>09_03_0181 +
           13149531-13149601,13150772-13151126,13152527-13152634,
           13152698-13152775,13154828-13154915,13156777-13157177
          Length = 366

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -3

Query: 499 LERYQLCVCIRYAQVSQTHTCTASWQPR 416
           ++++ L  C+ YA +    TC+ SW+ R
Sbjct: 231 IDQHNLAECLDYANMQVAGTCSCSWKHR 258


>06_03_0673 +
           23394027-23394094,23394267-23394539,23394613-23394958,
           23395031-23395168,23395260-23395385,23395464-23395652,
           23395723-23396202,23396274-23397236
          Length = 860

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -3

Query: 619 IGAVVAGGVCFVHTGPRLHRRTLSASYCNP 530
           IG +  GGV    TG R+H R  S++YC+P
Sbjct: 541 IGWMYGGGVA---TGFRMHARGWSSAYCSP 567


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,814,239
Number of Sequences: 37544
Number of extensions: 390910
Number of successful extensions: 1031
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1029
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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