Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_I24
(910 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyc... 56 7e-09
SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomy... 54 3e-08
SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism... 48 2e-06
SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyc... 42 2e-04
SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde reduc... 33 0.042
SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual 31 0.30
SPCC965.06 |||potassium channel subunit |Schizosaccharomyces pom... 29 0.69
SPAC1565.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 0.69
SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pomb... 28 1.6
SPBC20F10.10 |||cyclin pho85 family|Schizosaccharomyces pombe|ch... 28 2.1
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 28 2.1
SPBP22H7.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 2.8
SPAC637.10c |rpn10|pus1|19S proteasome regulatory subunit Rpn10|... 27 3.7
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|... 27 3.7
SPAC186.01 |||DIPSY family|Schizosaccharomyces pombe|chr 1|||Manual 27 4.9
SPAC3C7.06c |pit1||serine/threonine protein kinase Pit1|Schizosa... 26 8.5
>SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 56.0 bits (129), Expect = 7e-09
Identities = 30/78 (38%), Positives = 43/78 (55%)
Frame = +2
Query: 350 SVKEVATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGK 529
S E T+ L +G +P I G +L +V A+D GYR IDTA +YGNE + GK
Sbjct: 4 SQTESTTVTLTNGMVIPRIGFGAFMLKYNECYGLVTQALDSGYRHIDTAAVYGNEDICGK 63
Query: 530 AIKNKIDDGXVRRDELSL 583
AI + + V+R ++ L
Sbjct: 64 AIVDWCEKNNVKRTDIFL 81
>SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 321
Score = 54.0 bits (124), Expect = 3e-08
Identities = 31/71 (43%), Positives = 40/71 (56%)
Frame = +2
Query: 377 LRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDG 556
L DG+ +P + LGT P T V+TA+ GYR ID A IYGNE +G IK + G
Sbjct: 18 LADGSKIPGLGLGTWRSEPNQTKNAVKTALQYGYRHIDAAAIYGNEDEVGDGIK---ESG 74
Query: 557 XVRRDELSLWV 589
R+D +WV
Sbjct: 75 VPRKD---IWV 82
>SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 48.0 bits (109), Expect = 2e-06
Identities = 32/75 (42%), Positives = 40/75 (53%)
Frame = +2
Query: 365 ATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNK 544
A L +G +P I LGT T V A+ GYR IDTA+IYGNEK IG+ I+
Sbjct: 13 AYFTLPNGDKIPSIGLGTWRSGKDETKNAVCAALKAGYRHIDTAHIYGNEKEIGEGIR-- 70
Query: 545 IDDGXVRRDELSLWV 589
+ G R D +WV
Sbjct: 71 -ESGVPRTD---IWV 81
>SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 275
Score = 41.5 bits (93), Expect = 2e-04
Identities = 27/98 (27%), Positives = 46/98 (46%)
Frame = +2
Query: 371 LKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKID 550
+KL +G P A G+ ++ + V A+ GYR ID+A +Y NE G+AI ++
Sbjct: 6 VKLNNGLKCPQFAYGSYMVNRTKCFDSVYAALQCGYRHIDSAQMYHNEADCGRAILKFME 65
Query: 551 DGXVRRDELSLWVNCGVLPSXRSGGXXLQDSPGRPGLG 664
+ +R+++ L +S + S GLG
Sbjct: 66 ETGTKREDIWFTSKLNDLSGYKSTLSSIDASVKACGLG 103
>SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde
reductase AKR3C2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 284
Score = 33.5 bits (73), Expect = 0.042
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Frame = +2
Query: 395 MPVIALGTALLPP------RLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIK 538
+P +GTAL R + V+ A+ G+ ID A +YGNE+ +G A+K
Sbjct: 12 VPAYGVGTALFKKEKGEINRTIVDSVKNALAAGFIHIDCAEVYGNEEEVGVALK 65
>SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual
Length = 815
Score = 30.7 bits (66), Expect = 0.30
Identities = 18/58 (31%), Positives = 34/58 (58%)
Frame = -2
Query: 339 LASFSSAILVLYCSSVRSPVSRFCLPLSKRRCPLPGDSILTEVIFLNTKKHNMNQIIF 166
++SFS+ + +LY + +S VS +PL + L G S+LT +I++ K+ Q ++
Sbjct: 49 ISSFSTHLNILYFNLSKSMVSFAQVPL-EEYLNLLGHSLLTSIIYVMLKRRFYEQSVY 105
>SPCC965.06 |||potassium channel subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 344
Score = 29.5 bits (63), Expect = 0.69
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +2
Query: 440 TTEIVETAIDMGYRAIDTAYIYGN---EKLIGKAIK 538
T ++ A D+G DTA IY N E ++GKAIK
Sbjct: 46 TKNCLKQAWDLGINTFDTAEIYSNGNSETVMGKAIK 81
>SPAC1565.05 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 773
Score = 29.5 bits (63), Expect = 0.69
Identities = 20/78 (25%), Positives = 37/78 (47%)
Frame = +2
Query: 344 KGSVKEVATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLI 523
K S+K++ G ++ G A++P L +++ A +G R + G +LI
Sbjct: 366 KSSLKKMNQNSQLTGYIAVLLKKGLAIVPYTLPIKML-LADAVGKRTSKIGKLRGTNELI 424
Query: 524 GKAIKNKIDDGXVRRDEL 577
G+ + K +G RD+L
Sbjct: 425 GEGVLTKSKNGPSMRDQL 442
>SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2386
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -2
Query: 396 MNVPSRSFKVAT-SFTLPFSLASFSSAILVLYCSSVRSPVSRFCL 265
MN+ F + T ++TLPF + + + A++V +S V+ CL
Sbjct: 726 MNISEGDFLIRTQAYTLPFLVLTKNKALIVRIAELSQSDVATLCL 770
>SPBC20F10.10 |||cyclin pho85 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 243
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = -2
Query: 351 LPFSLASFSSAILVLYCSSVRSPVSRFCLPLSKRRCPLPGDSILTEVIFLNTKKHNMNQI 172
+P S S + L+ +V S + L + CP D L+ +I+L+ H+ +
Sbjct: 58 IPLSPTSLKNPCLIFSAKNVPSISIQAYLTRILKYCPATNDVFLSVLIYLDRIVHHFHFT 117
Query: 171 IFI 163
+FI
Sbjct: 118 VFI 120
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 27.9 bits (59), Expect = 2.1
Identities = 19/50 (38%), Positives = 20/50 (40%)
Frame = +2
Query: 632 LQDSPGRPGLGVFRPLPHPNPIXLXERHXFFPGKFPPVIPYSGVRLLGPP 781
L SP P V P P P PI + G PP P GV GPP
Sbjct: 728 LLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGP-PPPPPPPGVAGAGPP 776
>SPBP22H7.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 255
Score = 27.5 bits (58), Expect = 2.8
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -2
Query: 390 VPSRSFKVATSFTLPFSLASFSSAILV 310
+PS+ F++ T F PF+ FS +++V
Sbjct: 177 LPSQRFEIVTGFLSPFNKLYFSKSLIV 203
>SPAC637.10c |rpn10|pus1|19S proteasome regulatory subunit
Rpn10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 243
Score = 27.1 bits (57), Expect = 3.7
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = -3
Query: 806 VRGFPRPNXGVQVVELPSMGSPEEIFREKXGAFXSXKSDLDEEEVEKLQAQVAQGNPAGX 627
VRG + G+Q+ +L +I R++ AF DE+ + +L ++ + N A
Sbjct: 81 VRGNAKFGDGIQIAQLALKHRENKIQRQRIVAFVGSPIVEDEKNLIRLAKRMKKNNVAID 140
Query: 626 XHQIGAME 603
IG ++
Sbjct: 141 IIHIGELQ 148
>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1752
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = -2
Query: 828 GFLGQPXGTGFSKAEXGGPSSRT--PEYGITGGNFPGK 721
GF+G P FS GG R +YG+ G P K
Sbjct: 1495 GFVGSPDAAAFSPLVQGGSEGREGFGDYGLLGAASPYK 1532
>SPAC186.01 |||DIPSY family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 26.6 bits (56), Expect = 4.9
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -2
Query: 468 SIAVSTISVVNRGGSKAVPKAMTGMNVPSRSFKVA--TSFTLPFSLASFSS 322
SI STI+ GS+ +TG N P + +V T+ T +L S SS
Sbjct: 99 SIITSTITTTITSGSQLYTTTITGQNTPVDTVEVVIPTAGTFTTTLTSGSS 149
>SPAC3C7.06c |pit1||serine/threonine protein kinase
Pit1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 650
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = -2
Query: 357 FTLPFSLASFSSAILVLYCSSVRSPVSRFCLPLSKRRCPLPGDSILTE 214
F+ P++LA S +L + P + CL L R P D++ ++
Sbjct: 301 FSPPWNLAFASMLSQLLKWDPAKRPTAEMCLDLEFCRVSAPADAVASK 348
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,346,209
Number of Sequences: 5004
Number of extensions: 66751
Number of successful extensions: 220
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 220
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 460503700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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