Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_I24
(910 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1336 + 36396904-36397014,36397141-36397191,36397681-363977... 54 1e-07
05_05_0085 - 22265143-22265226,22265294-22265602,22266915-222671... 54 2e-07
01_06_1338 + 36411536-36411646,36411738-36411791,36411898-364119... 54 2e-07
10_01_0070 + 902999-903354,904354-904600,904718-904897,905087-90... 50 2e-06
10_01_0069 + 890634-890941,892146-892395,893146-893175,894956-89... 49 6e-06
04_01_0350 - 4610444-4610668,4612181-4612969 47 2e-05
01_06_1337 + 36404245-36404355,36404467-36404517,36405304-364053... 44 2e-04
10_01_0065 + 845447-846187,846969-847193 43 4e-04
04_04_0032 + 22291469-22291818,22292438-22292681,22292873-222930... 42 5e-04
04_04_0033 + 22295974-22296290,22296441-22296684,22296797-222969... 42 7e-04
04_04_0034 + 22298636-22298952,22299057-22299300,22299395-222995... 41 0.001
10_01_0066 + 848523-849269,849520-849741 41 0.002
03_02_0297 + 7196624-7196931,7198015-7198258,7198385-7198573,719... 37 0.019
05_05_0196 + 23152389-23152658,23153042-23153092,23153167-231532... 36 0.044
09_02_0012 + 2965797-2966714,2966756-2967011,2967051-2967147,296... 29 3.9
05_01_0291 - 2274587-2274676,2274871-2275076,2275638-2275719,227... 29 3.9
06_03_0705 - 23707987-23708295,23708532-23708573,23709772-237099... 28 8.9
04_03_0436 + 15918144-15918377,15918514-15918717,15918813-15918911 28 8.9
02_05_0286 - 27506925-27507278,27508439-27508812,27509041-275092... 28 8.9
02_01_0221 + 1447305-1447435,1448693-1449140 28 8.9
>01_06_1336 +
36396904-36397014,36397141-36397191,36397681-36397757,
36397876-36397963,36398616-36398891,36399002-36399250,
36400315-36400398
Length = 311
Score = 54.4 bits (125), Expect = 1e-07
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Frame = +2
Query: 377 LRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDG 556
L G +P + LGT P + + V A+ GYR ID A +Y NE +G A+K ++G
Sbjct: 7 LNTGAKIPSVGLGTWQSDPGVVGDAVYAAVKAGYRHIDCARMYKNENEVGIALKKLFEEG 66
Query: 557 XVRRDEL----SLWVNC 595
V+R++L LW +C
Sbjct: 67 VVKREDLFITSKLWCDC 83
>05_05_0085 -
22265143-22265226,22265294-22265602,22266915-22267187,
22267413-22267500,22267620-22267696,22267791-22267841,
22267967-22268077
Length = 330
Score = 54.0 bits (124), Expect = 2e-07
Identities = 27/67 (40%), Positives = 37/67 (55%)
Frame = +2
Query: 377 LRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDG 556
L G +P + LGT P + V A+ GYR ID A Y NEK IG A+K D+G
Sbjct: 7 LNTGAKIPSVGLGTWQAEPGVVGNAVYAAVKAGYRHIDCAQAYFNEKEIGVALKKVFDEG 66
Query: 557 XVRRDEL 577
V+R+++
Sbjct: 67 IVKREDI 73
>01_06_1338 +
36411536-36411646,36411738-36411791,36411898-36411974,
36412108-36412195,36412289-36412561,36412651-36412968
Length = 306
Score = 53.6 bits (123), Expect = 2e-07
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +2
Query: 377 LRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNE-KLIGKAIKNKIDD 553
L G +P + LGT + ++V A+ GYR ID A +Y NE ++IG A+K DD
Sbjct: 7 LNTGARIPSVGLGTYKAGTGVVADVVSAAVKAGYRHIDCAPLYKNEQEVIGGALKKLFDD 66
Query: 554 GXVRRDEL 577
G V+R++L
Sbjct: 67 GVVKREDL 74
>10_01_0070 +
902999-903354,904354-904600,904718-904897,905087-905332
Length = 342
Score = 50.4 bits (115), Expect = 2e-06
Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Frame = +2
Query: 377 LRDGTFMPVIALGTALLP------PRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIK 538
LR G MP++ +GTA P P + V AID GYR DTA YG E +G+A+
Sbjct: 21 LRSGKPMPLVGMGTASFPLDAPQLPATVRDAVLRAIDAGYRHFDTAAAYGTEAPLGEAVL 80
Query: 539 NKIDDGXV-RRDEL----SLWVN 592
+ G V RD+L LW++
Sbjct: 81 EAVRAGMVASRDDLYITSKLWIS 103
>10_01_0069 +
890634-890941,892146-892395,893146-893175,894956-895135,
895418-895669
Length = 339
Score = 48.8 bits (111), Expect = 6e-06
Identities = 36/94 (38%), Positives = 46/94 (48%), Gaps = 14/94 (14%)
Frame = +2
Query: 377 LRDGTFMPVIALGTALLP-----PRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKN 541
L G MP + +GTA P P ++V AI+ GYR DTA +Y E ++G A+
Sbjct: 6 LSSGKPMPRVGMGTASFPLGATDPSTVKDVVLRAIEAGYRHFDTAAVYQTEAILGDAVAE 65
Query: 542 KIDDGXV-RRDEL----SLWVNCG----VLPSXR 616
+ G V RDEL LWV VLPS R
Sbjct: 66 AVRAGLVASRDELYITSKLWVAHAHPGHVLPSLR 99
>04_01_0350 - 4610444-4610668,4612181-4612969
Length = 337
Score = 47.2 bits (107), Expect = 2e-05
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 362 VATLKLRDGTFMPVIALGT-ALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIK 538
V + L G MPV+ GT + PP + A+ +GYR +DTA +YG E +G A+
Sbjct: 20 VPCVTLNSGHAMPVLGFGTGSSTPPADLAATIAHAVRLGYRHLDTAAVYGTEGAVGAAVA 79
Query: 539 NKIDDGXV-RRDEL 577
+ G V R EL
Sbjct: 80 EAVRCGAVASRGEL 93
>01_06_1337 +
36404245-36404355,36404467-36404517,36405304-36405337,
36405428-36405485,36405499-36405586,36406110-36406385,
36406505-36406753,36407558-36407641
Length = 316
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/59 (37%), Positives = 30/59 (50%)
Frame = +2
Query: 377 LRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDD 553
L G +P + LGT P + V A+ GYR ID A Y NEK +G A+K ++
Sbjct: 7 LNTGAKIPSVGLGTWQSDPGVVGNAVYAAVKAGYRHIDCASAYNNEKEVGLALKKLFEE 65
>10_01_0065 + 845447-846187,846969-847193
Length = 321
Score = 42.7 bits (96), Expect = 4e-04
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +2
Query: 395 MPVIALGTALLP---PRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGXV 562
MP + +GTA P TT + AI++GYR DTA IY E +G+A+ + G +
Sbjct: 16 MPRVGMGTAAFPFTSSEDTTAAMLRAIELGYRHFDTARIYATEGCVGEAVAEAVRRGLI 74
>04_04_0032 +
22291469-22291818,22292438-22292681,22292873-22293052,
22293843-22294070
Length = 333
Score = 42.3 bits (95), Expect = 5e-04
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Frame = +2
Query: 386 GTFMPVIALGTALLPP---RLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDG 556
G +P + LGTA L + A+++GYR IDTA +YG+E+++G+A+ G
Sbjct: 25 GRAVPAVGLGTASLRSVGEESFRGALLAALEVGYRHIDTASVYGSERVVGEAVAGAARRG 84
Query: 557 XVR-RDEL----SLW-VNCG---VLPSXRSGGXXLQ 637
+ R+E+ +W C VLPS R LQ
Sbjct: 85 VIACREEVFVTTKVWCTQCHPDLVLPSLRESLQNLQ 120
>04_04_0033 +
22295974-22296290,22296441-22296684,22296797-22296976,
22297749-22297979
Length = 323
Score = 41.9 bits (94), Expect = 7e-04
Identities = 35/102 (34%), Positives = 47/102 (46%), Gaps = 11/102 (10%)
Frame = +2
Query: 365 ATLKLRDGTFMPVIALGTALLP--PRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIK 538
A L+ D MP + +G A P P T + V A++ G+R DTA +Y E +G+AI
Sbjct: 8 AVLRHGDARPMPAVGMGVAEYPSTPERTRDAVLAALEAGFRHFDTASLYRTEAPLGEAIA 67
Query: 539 NKIDDGXV-RRDE----LSLW-VNCG---VLPSXRSGGXXLQ 637
G + R+E LW C VLPS R LQ
Sbjct: 68 EATRRGLLASREEAFVTTKLWCTQCHPDLVLPSLRESLRNLQ 109
>04_04_0034 +
22298636-22298952,22299057-22299300,22299395-22299574,
22300819-22300842,22301055-22301285
Length = 331
Score = 41.1 bits (92), Expect = 0.001
Identities = 38/108 (35%), Positives = 51/108 (47%), Gaps = 12/108 (11%)
Frame = +2
Query: 350 SVKEVATLKLRDGTFMPVIALGTA---LLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKL 520
+V EVA L+ G MP + +GTA P A+++G+R DTA +YG E
Sbjct: 3 AVPEVA-LRHGAGRPMPAVGVGTADSAATSPETKRGAALAALEVGFRHFDTAALYGTEAP 61
Query: 521 IGKAIKNKIDDGXV-RRDEL----SLW-VNCG---VLPSXRSGGXXLQ 637
+G+AI G V R+E+ LW C VLPS R LQ
Sbjct: 62 LGEAIAEATRRGLVASREEVFVTTKLWCTQCHPGLVLPSLRESLRNLQ 109
>10_01_0066 + 848523-849269,849520-849741
Length = 322
Score = 40.7 bits (91), Expect = 0.002
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = +2
Query: 395 MPVIALGTALLP---PRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGXV 562
MP I +GTA P TT + AI++GYR DTA +Y E + +A+ + G V
Sbjct: 18 MPRIGMGTAAFPFTSSEETTAALLRAIELGYRHFDTARLYATEGCVSEAVAEAVRRGLV 76
>03_02_0297 +
7196624-7196931,7198015-7198258,7198385-7198573,
7198650-7198874
Length = 321
Score = 37.1 bits (82), Expect = 0.019
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +2
Query: 386 GTFMPVIALGTALLPPRLTT--EIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGX 559
G MP + +GTA+ PR V AI+ GYR DTA Y E IG+A + G
Sbjct: 12 GFGMPRVGMGTAVQGPRPEPIRRAVLKAIEAGYRHFDTAAHYETEAPIGEAAAEAVRSGA 71
Query: 560 V 562
+
Sbjct: 72 I 72
>05_05_0196 +
23152389-23152658,23153042-23153092,23153167-23153240,
23153356-23153443,23153541-23153738,23153824-23153895,
23154034-23154093,23154194-23154370,23154975-23155064
Length = 359
Score = 35.9 bits (79), Expect = 0.044
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +2
Query: 404 IALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGXVRRD 571
+A+ + + ++ + GYR +DTA YG E+ +GK +K ++ G R+D
Sbjct: 69 VAMASKPILSVFANNLIVNHLQAGYRHVDTAAQYGIEQEVGKGLKAAMEAGINRKD 124
>09_02_0012 +
2965797-2966714,2966756-2967011,2967051-2967147,
2967175-2967634,2967804-2968117,2968220-2968235
Length = 686
Score = 29.5 bits (63), Expect = 3.9
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +2
Query: 218 VKMESPGSGQRRLDNGKQKRDTGDLTDEQYKTRIAELNEAKLKGSVKEVATLKLRD 385
V E PG G + D G +T + K R A L EA + +KE A K +D
Sbjct: 603 VYAEFPGGGNNDAQEPLLE-DAGKITCTRQKVRAASLEEAVFRTEIKEGAEGKAKD 657
>05_01_0291 -
2274587-2274676,2274871-2275076,2275638-2275719,
2275948-2276064,2276489-2276751,2277548-2277620,
2278324-2278427,2278613-2278706
Length = 342
Score = 29.5 bits (63), Expect = 3.9
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -3
Query: 833 PKVFWANXXVRGFPRPNXGVQVVELPSMGSPEEIFREKXGAFXSXK-SDLDEEEVEKLQ 660
P+++W + FP+ N V V + P +G E E G++ + K + L E++ K+Q
Sbjct: 124 PELYWGDQVPEQFPKSNVIVSVCDTPKVGDLVEWLSE--GSYWTAKVTKLLSEDMVKVQ 180
>06_03_0705 -
23707987-23708295,23708532-23708573,23709772-23709957,
23710112-23710222,23710337-23710408,23710499-23710747,
23711052-23711135,23711271-23711456,23711540-23711764
Length = 487
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -1
Query: 322 CDPGLILFVCEVSRVSLLFAVVQAPLPAPGRLHLDRS 212
C L+ F+ + L F V P PAP LH R+
Sbjct: 341 CSTSLVHFLIALQPTPLPFGVQLKPAPAPRELHTSRA 377
>04_03_0436 + 15918144-15918377,15918514-15918717,15918813-15918911
Length = 178
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = +2
Query: 449 IVETAIDMGYRAIDTAYIYG---NEKLIGKAIK 538
++ A+ G +DTA IYG NE L+GKA++
Sbjct: 49 LIHHAVAAGVTLLDTADIYGPHANEALLGKALQ 81
>02_05_0286 -
27506925-27507278,27508439-27508812,27509041-27509218,
27510878-27511105,27511215-27511316,27511415-27512131,
27512270-27512387,27512500-27512744,27512854-27513054,
27513920-27514324
Length = 973
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 237 GAGSGAWTTANRSETRETSQTNNIRPGSQN*TKLS*KG 350
G G+GA ++A + TR+T N+ R GS + +S G
Sbjct: 215 GGGAGAGSSAGGAMTRDTEAENDSRSGSDHLDAISAAG 252
>02_01_0221 + 1447305-1447435,1448693-1449140
Length = 192
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 651 RPGESCRXXPPDRXDGSTPQFTHNESSSRLT 559
+P R PP +GS+ QF H S+S+ T
Sbjct: 83 KPSAQIRPHPPGPPNGSSEQFRHLSSTSKST 113
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,937,342
Number of Sequences: 37544
Number of extensions: 505358
Number of successful extensions: 1499
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1496
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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