Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_I24
         (910 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80844-1|AAB37976.1|  317|Caenorhabditis elegans Hypothetical pr...    71   9e-13
AL110482-2|CAB60335.1|  316|Caenorhabditis elegans Hypothetical ...    66   2e-11
AL110482-1|CAB54385.1|  316|Caenorhabditis elegans Hypothetical ...    66   2e-11
U80844-2|AAB37972.1|  134|Caenorhabditis elegans Hypothetical pr...    54   1e-07
U55368-5|AAA97992.2|  333|Caenorhabditis elegans Hypothetical pr...    54   1e-07
AL110482-3|CAB60336.1|  339|Caenorhabditis elegans Hypothetical ...    54   1e-07
Z75553-1|CAA99947.2|  320|Caenorhabditis elegans Hypothetical pr...    50   2e-06
Z81088-3|CAB03128.1|  283|Caenorhabditis elegans Hypothetical pr...    48   7e-06
U21324-6|AAA62562.1|  287|Caenorhabditis elegans Hypothetical pr...    47   2e-05
Z71181-2|CAA94895.1|  301|Caenorhabditis elegans Hypothetical pr...    46   4e-05
U50068-4|AAB37733.1|  287|Caenorhabditis elegans Hypothetical pr...    44   1e-04
Z81088-2|CAB03127.1|  297|Caenorhabditis elegans Hypothetical pr...    42   5e-04
U21308-3|AAB93322.2|  321|Caenorhabditis elegans Hypothetical pr...    42   6e-04
U00033-13|AAC48300.1|  439|Caenorhabditis elegans Mechanosensory...    31   1.1  

>U80844-1|AAB37976.1|  317|Caenorhabditis elegans Hypothetical
           protein C07D8.6 protein.
          Length = 317

 Score = 71.3 bits (167), Expect = 9e-13
 Identities = 35/71 (49%), Positives = 47/71 (66%)
 Frame = +2

Query: 365 ATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNK 544
           A++KL +G  MPVI LGT    P      V+TA+  GYR IDTA +Y NE+ IG AIK  
Sbjct: 6   ASIKLSNGVEMPVIGLGTWQSSPAEVITAVKTAVKAGYRLIDTASVYQNEEAIGTAIKEL 65

Query: 545 IDDGXVRRDEL 577
           +++G V+R+EL
Sbjct: 66  LEEGVVKREEL 76


>AL110482-2|CAB60335.1|  316|Caenorhabditis elegans Hypothetical
           protein Y39G8B.1b protein.
          Length = 316

 Score = 66.5 bits (155), Expect = 2e-11
 Identities = 31/72 (43%), Positives = 46/72 (63%)
 Frame = +2

Query: 362 VATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKN 541
           V +LKL  G  +P I LGT    P      ++TA+  GYR ID A++Y N+K +G+A+K 
Sbjct: 2   VQSLKLNSGYSIPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKE 61

Query: 542 KIDDGXVRRDEL 577
            +D+G V+R+EL
Sbjct: 62  ILDEGKVKREEL 73


>AL110482-1|CAB54385.1|  316|Caenorhabditis elegans Hypothetical
           protein Y39G8B.1a protein.
          Length = 316

 Score = 66.5 bits (155), Expect = 2e-11
 Identities = 31/72 (43%), Positives = 46/72 (63%)
 Frame = +2

Query: 362 VATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKN 541
           V +LKL  G  +P I LGT    P      ++TA+  GYR ID A++Y N+K +G+A+K 
Sbjct: 2   VQSLKLNSGYSIPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKE 61

Query: 542 KIDDGXVRRDEL 577
            +D+G V+R+EL
Sbjct: 62  ILDEGKVKREEL 73


>U80844-2|AAB37972.1|  134|Caenorhabditis elegans Hypothetical
           protein C07D8.5 protein.
          Length = 134

 Score = 54.4 bits (125), Expect = 1e-07
 Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 1/106 (0%)
 Frame = +2

Query: 263 GKQKRDTGDLTDEQYKTRIAE-LNEAKLKGSVKEVATLKLRDGTFMPVIALGTALLPPRL 439
           G+     G+ +D+ +   +   L ++ LK S  + + L L +   MP + LGT       
Sbjct: 12  GRSSNSDGNASDDGHPPALTPILLKSYLKNSDAK-SHLTLSNAHSMPAVGLGTWQSNAED 70

Query: 440 TTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGXVRRDEL 577
               V+ A+  GY  IDTA  Y NE+ IG AIK  I +G V+R++L
Sbjct: 71  VISAVKAAVKNGYSLIDTASGYNNEEFIGTAIKEVIAEGVVKREDL 116


>U55368-5|AAA97992.2|  333|Caenorhabditis elegans Hypothetical
           protein T08H10.1 protein.
          Length = 333

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
 Frame = +2

Query: 362 VATLKLRDGTFMPVIALGTALLPPRLT-TEIVETAIDMGYRAIDTAYIYGNEKLIGKAIK 538
           V ++ L  G  +P+  LGT  +      T  +  A+D GYR IDTA++Y NE +IGK + 
Sbjct: 3   VDSIPLNTGAQLPLFGLGTWQVKDEAELTVALRAALDAGYRLIDTAHLYQNEHIIGKVLH 62

Query: 539 NKIDDGXVRRDEL 577
             I  G ++R+++
Sbjct: 63  EYISSGKLKREDI 75


>AL110482-3|CAB60336.1|  339|Caenorhabditis elegans Hypothetical
           protein Y39G8B.2 protein.
          Length = 339

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 30/72 (41%), Positives = 40/72 (55%)
 Frame = +2

Query: 368 TLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKI 547
           T+ L  G  MPVI  GT  LP  L  E V  A++ GYR ID+A  + N++ +   IK+  
Sbjct: 6   TVTLNSGYEMPVIGYGTWQLPKNLAAERVRDALEAGYRHIDSALSFKNQEEVAAGIKDWC 65

Query: 548 DDGXVRRDELSL 583
               VRR+EL L
Sbjct: 66  KIRKVRREELFL 77


>Z75553-1|CAA99947.2|  320|Caenorhabditis elegans Hypothetical
           protein ZC443.1 protein.
          Length = 320

 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 25/73 (34%), Positives = 39/73 (53%)
 Frame = +2

Query: 359 EVATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIK 538
           +V    L +G  MP I LGT  +       ++  A+  GYR IDTA +Y NE  IG A+ 
Sbjct: 4   KVPIFTLSNGVLMPSIGLGTWQMTGEEGKTVIRNAVLAGYRHIDTATLYQNEHQIGDALA 63

Query: 539 NKIDDGXVRRDEL 577
               +G ++R+++
Sbjct: 64  ELFAEGILKREDI 76


>Z81088-3|CAB03128.1|  283|Caenorhabditis elegans Hypothetical
           protein F53F1.3 protein.
          Length = 283

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 23/70 (32%), Positives = 40/70 (57%)
 Frame = +2

Query: 368 TLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKI 547
           ++KL  G   P+I LGT  +       +++ A+  GYR  DTA +Y NEK IG A++  +
Sbjct: 2   SIKLNTGYDCPLIGLGTYKIIGDQVLPVLDAALTAGYRLFDTAKVYNNEKEIGDALEILL 61

Query: 548 DDGXVRRDEL 577
               ++R+++
Sbjct: 62  PKHNLKREDI 71


>U21324-6|AAA62562.1|  287|Caenorhabditis elegans Hypothetical
           protein C35D10.6 protein.
          Length = 287

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
 Frame = +2

Query: 395 MPVIALGT-ALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGXVRRD 571
           MP+I +GT  +    +  ++++     GYR IDTA +Y NE  IG+ ++  +    ++R+
Sbjct: 11  MPLIGIGTWQVQKEEILRQVIDAGFKEGYRFIDTAQVYNNEAKIGRILEKLLPANGLKRE 70

Query: 572 ELSLWVNCGVLPS 610
           +  +W+   + PS
Sbjct: 71  D--IWITSKLAPS 81


>Z71181-2|CAA94895.1|  301|Caenorhabditis elegans Hypothetical
           protein K07C5.2 protein.
          Length = 301

 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
 Frame = +2

Query: 374 KLRDGTFMPVIALGTALLPPRLTTEI-VETAIDMGYRAIDTAYIYGNEKLIGKAIKNKID 550
           K  DG  MP I LG + +  +   ++ +E A+  GYR  DTA +Y NE  +G ++K  + 
Sbjct: 13  KFSDGYEMPKIGLGISRIETQQDLDVSIEAALKSGYRQFDTANLYKNETFLGNSLKKYLP 72

Query: 551 DGXVRRDEL 577
              + R+++
Sbjct: 73  QFGLTREDV 81


>U50068-4|AAB37733.1|  287|Caenorhabditis elegans Hypothetical
           protein C01G5.5 protein.
          Length = 287

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 24/70 (34%), Positives = 39/70 (55%)
 Frame = +2

Query: 374 KLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDD 553
           KL++G  +P +ALGT           V+ A+ +GYR+ DTA  Y NEK +G A+K  +  
Sbjct: 3   KLKNGQEIPKLALGTYEAKGDQLFAAVDEALKVGYRSFDTAKYYENEKDLGLALKTLLPR 62

Query: 554 GXVRRDELSL 583
             +  +++ L
Sbjct: 63  HNICSEDIYL 72


>Z81088-2|CAB03127.1|  297|Caenorhabditis elegans Hypothetical
           protein F53F1.2 protein.
          Length = 297

 Score = 42.3 bits (95), Expect = 5e-04
 Identities = 22/70 (31%), Positives = 35/70 (50%)
 Frame = +2

Query: 374 KLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDD 553
           KL  G  +P +  GT  +        ++ A+  GYR  DTA  Y NEK +G+A+K  +  
Sbjct: 14  KLNSGYNIPFVGFGTYKVTGENVPPAIDAALTAGYRMFDTAKYYLNEKELGEALKILLPK 73

Query: 554 GXVRRDELSL 583
             + R ++ L
Sbjct: 74  HGLSRSDVFL 83


>U21308-3|AAB93322.2|  321|Caenorhabditis elegans Hypothetical
           protein ZK1290.5 protein.
          Length = 321

 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
 Frame = +2

Query: 362 VATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKN 541
           + T  L +   MP+I LGT          ++ +    GYR IDTA  YG EK +G A+KN
Sbjct: 2   IPTTVLSNNVEMPLIGLGTTHSGGYYHDAVLHSIKKCGYRLIDTAKRYGVEKQLGIAVKN 61

Query: 542 KIDDGXVRRDEL----SLW-VNCG 598
                 V R+E+     LW V+CG
Sbjct: 62  ----CSVPREEMFLSTKLWPVDCG 81


>U00033-13|AAC48300.1|  439|Caenorhabditis elegans Mechanosensory
           abnormality protein14 protein.
          Length = 439

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
 Frame = +2

Query: 446 EIVETAIDMGYRAIDTAYIYG---NEKLIGKAI 535
           +IVETAI  G   IDT Y Y    +E ++GKA+
Sbjct: 118 KIVETAIKQGINYIDTGYWYSQSRSESILGKAL 150


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,735,656
Number of Sequences: 27780
Number of extensions: 410272
Number of successful extensions: 1201
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1199
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)