Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_I21
         (945 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070697-1|AAL48168.1|   79|Drosophila melanogaster RH34416p pro...    59   1e-08
AE014134-1237|AAF52481.1|   79|Drosophila melanogaster CG13779-P...    59   1e-08
BT003557-1|AAO39561.1|  322|Drosophila melanogaster LP07855p pro...    33   0.75 
AE014297-2230|AAF55332.2|  271|Drosophila melanogaster CG14889-P...    33   0.75 
L07065-1|AAA16186.1| 1283|Drosophila melanogaster P-glycoprotein...    29   9.3  

>AY070697-1|AAL48168.1|   79|Drosophila melanogaster RH34416p
           protein.
          Length = 79

 Score = 58.8 bits (136), Expect = 1e-08
 Identities = 26/57 (45%), Positives = 37/57 (64%)
 Frame = +1

Query: 166 DLGXXXXXXXXXXXPAENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLK 336
           DLG           PAE++   D D+E+++VWEDNW+DD ++DDF+QQL+  LE  K
Sbjct: 21  DLGLLEEDDEFEEFPAEDFRVGD-DEEELNVWEDNWDDDNVEDDFSQQLKAHLESKK 76


>AE014134-1237|AAF52481.1|   79|Drosophila melanogaster CG13779-PA
           protein.
          Length = 79

 Score = 58.8 bits (136), Expect = 1e-08
 Identities = 26/57 (45%), Positives = 37/57 (64%)
 Frame = +1

Query: 166 DLGXXXXXXXXXXXPAENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLK 336
           DLG           PAE++   D D+E+++VWEDNW+DD ++DDF+QQL+  LE  K
Sbjct: 21  DLGLLEEDDEFEEFPAEDFRVGD-DEEELNVWEDNWDDDNVEDDFSQQLKAHLESKK 76


>BT003557-1|AAO39561.1|  322|Drosophila melanogaster LP07855p
           protein.
          Length = 322

 Score = 32.7 bits (71), Expect = 0.75
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +3

Query: 480 PGXGGXPXXGGFXGPPXLKXXXGXLGPP 563
           PG  G P   G+ GPP  K   G +GPP
Sbjct: 72  PGIEGPPGLPGYQGPPGEKGDRGDIGPP 99


>AE014297-2230|AAF55332.2|  271|Drosophila melanogaster CG14889-PA
           protein.
          Length = 271

 Score = 32.7 bits (71), Expect = 0.75
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +3

Query: 480 PGXGGXPXXGGFXGPPXLKXXXGXLGPP 563
           PG  G P   G+ GPP  K   G +GPP
Sbjct: 121 PGIEGPPGLPGYQGPPGEKGDRGDIGPP 148


>L07065-1|AAA16186.1| 1283|Drosophila melanogaster
           P-glycoprotein/multidrug resistanceprotein protein.
          Length = 1283

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 11/42 (26%), Positives = 29/42 (69%)
 Frame = +1

Query: 214 ENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKD 339
           +N+  +D D+E++ V  ++ ++DV+  D  +  +++++K+KD
Sbjct: 655 KNFDIKDEDEEEIKVLSEDEDEDVMVTD-EKNKKKKMKKVKD 695


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,831,256
Number of Sequences: 53049
Number of extensions: 610389
Number of successful extensions: 2046
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1904
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4689737487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)