Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_I21
(945 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006714-3|AAK29724.3| 82|Caenorhabditis elegans Hypothetical ... 50 3e-06
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.52
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.52
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.52
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 8.5
>AC006714-3|AAK29724.3| 82|Caenorhabditis elegans Hypothetical
protein Y119D3B.15 protein.
Length = 82
Score = 49.6 bits (113), Expect = 3e-06
Identities = 16/42 (38%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = +1
Query: 208 PAENWGTE-DADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEK 330
P + W + +++DV+VWEDNW+D+ + +F++QL+++L K
Sbjct: 35 PVQEWAERAEGEEDDVNVWEDNWDDETHESEFSKQLKEELRK 76
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.52
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = +2
Query: 734 PXXKXPPPPXGEGXFXXXXPXXXPPXXXXXXPXXXXXXXXXPPPXGGXXXXPP 892
P PPPP G PP P PPP GG PP
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 29.1 bits (62), Expect = 4.8
Identities = 22/85 (25%), Positives = 22/85 (25%), Gaps = 3/85 (3%)
Frame = +2
Query: 656 KXXXXPPXXXXFFFSXXXGGGWGXXFPXXKXPPPPXGEGXFXXXXPXXXPP---XXXXXX 826
K PP GG P PPPP G P PP
Sbjct: 682 KIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGG 741
Query: 827 PXXXXXXXXXPPPXGGXXXXPPXXG 901
P PP GG PP G
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPG 766
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.52
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = +2
Query: 734 PXXKXPPPPXGEGXFXXXXPXXXPPXXXXXXPXXXXXXXXXPPPXGGXXXXPP 892
P PPPP G PP P PPP GG PP
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 29.1 bits (62), Expect = 4.8
Identities = 22/85 (25%), Positives = 22/85 (25%), Gaps = 3/85 (3%)
Frame = +2
Query: 656 KXXXXPPXXXXFFFSXXXGGGWGXXFPXXKXPPPPXGEGXFXXXXPXXXPP---XXXXXX 826
K PP GG P PPPP G P PP
Sbjct: 682 KIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGG 741
Query: 827 PXXXXXXXXXPPPXGGXXXXPPXXG 901
P PP GG PP G
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPG 766
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.52
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = +2
Query: 734 PXXKXPPPPXGEGXFXXXXPXXXPPXXXXXXPXXXXXXXXXPPPXGGXXXXPP 892
P PPPP G PP P PPP GG PP
Sbjct: 304 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 356
Score = 29.1 bits (62), Expect = 4.8
Identities = 22/85 (25%), Positives = 22/85 (25%), Gaps = 3/85 (3%)
Frame = +2
Query: 656 KXXXXPPXXXXFFFSXXXGGGWGXXFPXXKXPPPPXGEGXFXXXXPXXXPP---XXXXXX 826
K PP GG P PPPP G P PP
Sbjct: 265 KIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGG 324
Query: 827 PXXXXXXXXXPPPXGGXXXXPPXXG 901
P PP GG PP G
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPPG 349
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/61 (26%), Positives = 17/61 (27%)
Frame = -1
Query: 891 GGXXXXPPXGGGKXXXXXXXXGXXXXXXGGXXXGXXXXNXPSPXGGGGFXXXGKXXPHPP 712
GG GG G GG G GGGG+ P PP
Sbjct: 247 GGSSGGGYSSGGSSGGGYSTGGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPP 306
Query: 711 P 709
P
Sbjct: 307 P 307
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/61 (26%), Positives = 17/61 (27%)
Frame = -1
Query: 891 GGXXXXPPXGGGKXXXXXXXXGXXXXXXGGXXXGXXXXNXPSPXGGGGFXXXGKXXPHPP 712
GG GG G GG G GGGG+ P PP
Sbjct: 247 GGSSGGGYSSGGSSGGGYSTGGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPP 306
Query: 711 P 709
P
Sbjct: 307 P 307
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,261,327
Number of Sequences: 27780
Number of extensions: 280179
Number of successful extensions: 1699
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1579
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2444174194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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