Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_I16
         (919 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...   102   2e-23
Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protei...    25   3.2  
AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismuta...    25   3.2  
AF457548-1|AAL68778.1|  178|Anopheles gambiae antigen 5-related ...    25   3.2  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score =  102 bits (244), Expect = 2e-23
 Identities = 63/172 (36%), Positives = 90/172 (52%), Gaps = 1/172 (0%)
 Frame = +3

Query: 282 ASSACGRRGPENLCDPPLDQSPELACRVCDAARPDRRHPSLYLTDLNNPNNITCWRSAAL 461
           A++ CG     + C      S   +C VC A +    H   +LTD ++PNN T W+S  +
Sbjct: 65  ATNTCGDETDTDFC-VQTGYSNRKSCDVCHAGQ----HSPQFLTDFHDPNNPTWWQSETM 119

Query: 462 MPASYDSPPDNVSLTLSLGKKYELTYISLQFCPKSARPDSVAIYKSADYGLNWQPFQFYS 641
                   P+ V+LTL LGK +++TYI + F   S RP+S AIYK       W P+Q+YS
Sbjct: 120 FEGV--QYPNQVNLTLGLGKSFDITYIRIVF--HSPRPESFAIYKRVTPNGPWIPYQYYS 175

Query: 642 SQCRRVYGRPNKATVTAANEQEARCSDTHRLAGDS-AGXARLAFSTLEGRPA 794
           + CR  YG P+  +V    E E+R   T   +  S      +AFS+LEGRP+
Sbjct: 176 ATCRDTYGLPDSLSV-MNGEDESRALCTSEYSDISPLRDGNIAFSSLEGRPS 226



 Score = 31.5 bits (68), Expect = 0.037
 Identities = 13/24 (54%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
 Frame = +2

Query: 197 PPDPCYEE-SRPRRCIPDFVNAAF 265
           PP  C +   RP+RCIP+F NAA+
Sbjct: 36  PPLECVDPYGRPQRCIPEFENAAY 59



 Score = 23.4 bits (48), Expect = 9.8
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +2

Query: 782 GSTSAGNFXLSPVLQDWVTAT 844
           G  SA NF     LQ WVTAT
Sbjct: 223 GRPSAINFDHHLELQQWVTAT 243


>Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protein
           precursor protein.
          Length = 260

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
 Frame = +3

Query: 282 ASSACGRRGPENLCDPPLDQSPELACRVCDAARPDRRHPSL--YLTDLNNPN 431
           +S  C R GP   C+PP   S    C+    AR     P+L  Y+ D +N N
Sbjct: 26  SSDLCPRGGPHVGCNPP-SSSGGPTCQGKQKARKVLLTPALQAYIMDEHNLN 76


>AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismutase
           2 protein.
          Length = 211

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +3

Query: 669 PNKATVTAANEQEARCSDTHRLAGDSAGXARLAFS 773
           P+K +  A N+Q     D   +A D  G A+ ++S
Sbjct: 85  PDKVSHGAPNDQVRHVGDLGNIAADENGIAKTSYS 119


>AF457548-1|AAL68778.1|  178|Anopheles gambiae antigen 5-related 1
           protein protein.
          Length = 178

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
 Frame = +3

Query: 282 ASSACGRRGPENLCDPPLDQSPELACRVCDAARPDRRHPSL--YLTDLNNPN 431
           +S  C R GP   C+PP   S    C+    AR     P+L  Y+ D +N N
Sbjct: 26  SSDLCPRGGPHVGCNPP-SSSGGPTCQGKQKARKVLLTPALQAYIMDEHNLN 76


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 841,970
Number of Sequences: 2352
Number of extensions: 16794
Number of successful extensions: 83
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 80
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 99641691
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)