Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_I09
         (850 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   1.2  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   2.5  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   6.7  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 22.6 bits (46), Expect(2) = 1.2
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = -3

Query: 644 GXXXPXXFXXXGGGGGGG 591
           G   P      GGGGGGG
Sbjct: 539 GPVGPAGVGGGGGGGGGG 556



 Score = 21.8 bits (44), Expect(2) = 1.2
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -3

Query: 611 GGGGGGGXXFXG 576
           GGGGGGG    G
Sbjct: 552 GGGGGGGGGVIG 563


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +3

Query: 780 PXRXGFLXGXGXPPPP 827
           P R  F  G G PPPP
Sbjct: 771 PSRSAFADGIGSPPPP 786



 Score = 25.0 bits (52), Expect = 2.9
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +1

Query: 592 PPPPPPPXXKXXXGXXXPP 648
           PPPPPPP      G    P
Sbjct: 784 PPPPPPPPSSLSPGGVPRP 802



 Score = 23.8 bits (49), Expect = 6.7
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +1

Query: 592 PPPPPPP 612
           PPPPPPP
Sbjct: 783 PPPPPPP 789



 Score = 22.6 bits (46), Expect(2) = 2.5
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -2

Query: 687 GXGGPPPPP 661
           G G PPPPP
Sbjct: 779 GIGSPPPPP 787



 Score = 20.6 bits (41), Expect(2) = 2.5
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -2

Query: 675 PPPPPXXXXGGG 640
           PPPPP     GG
Sbjct: 787 PPPPPSSLSPGG 798


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +1

Query: 592 PPPPPPP 612
           PPPPPPP
Sbjct: 530 PPPPPPP 536


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 510,552
Number of Sequences: 2352
Number of extensions: 8586
Number of successful extensions: 164
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 101
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90132318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)