Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_I08
(825 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 31 0.76
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 0.76
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 25 2.0
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 30 2.3
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.3
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.3
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.3
Z81142-5|CAB03507.1| 319|Caenorhabditis elegans Hypothetical pr... 29 3.1
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 3.1
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 3.1
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 29 3.1
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 29 3.1
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.0
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.0
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 4.0
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 4.0
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 4.0
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 26 4.7
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 26 4.8
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 27 4.8
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 26 4.9
U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific... 27 5.0
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 5.3
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 5.3
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 24 6.8
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 28 9.3
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 28 9.3
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z81125-3|CAB03384.1| 790|Caenorhabditis elegans Hypothetical pr... 25 9.8
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 31.5 bits (68), Expect = 0.76
Identities = 23/68 (33%), Positives = 23/68 (33%), Gaps = 5/68 (7%)
Frame = +3
Query: 615 GGPXXF---FXXXPXXGXFXPPPPPPXXFXGGGXXFXPXKXXGXXPXXXXXXXPP--XXX 779
GGP F F P G F P PP GGG P G P PP
Sbjct: 131 GGPPPFGQPFQQAPQ-GMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQ 189
Query: 780 XNPPXXGG 803
PP GG
Sbjct: 190 GGPPGHGG 197
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 31.5 bits (68), Expect = 0.76
Identities = 23/68 (33%), Positives = 23/68 (33%), Gaps = 5/68 (7%)
Frame = +3
Query: 615 GGPXXF---FXXXPXXGXFXPPPPPPXXFXGGGXXFXPXKXXGXXPXXXXXXXPP--XXX 779
GGP F F P G F P PP GGG P G P PP
Sbjct: 411 GGPPPFGQPFQQAPQ-GMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQ 469
Query: 780 XNPPXXGG 803
PP GG
Sbjct: 470 GGPPGHGG 477
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/65 (32%), Positives = 21/65 (32%), Gaps = 6/65 (9%)
Frame = +3
Query: 630 FFXXXPXXGXFXPPP------PPPXXFXGGGXXFXPXKXXGXXPXXXXXXXPPXXXXNPP 791
FF P F PPP PPP GG P G P PP PP
Sbjct: 63 FFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPP---PP 119
Query: 792 XXGGG 806
G G
Sbjct: 120 PSGLG 124
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
protein F07A11.4 protein.
Length = 1095
Score = 24.6 bits (51), Expect(2) = 2.0
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 665 PPPPPPXPXXXGGG 706
PPPPPP P G
Sbjct: 363 PPPPPPPPSAASNG 376
Score = 23.8 bits (49), Expect(2) = 2.0
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +2
Query: 644 PXXGXFXPPPPPPXP 688
P PPPPPP P
Sbjct: 353 PQPQSLVPPPPPPPP 367
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Frame = +2
Query: 665 PPPPPPXPXXXGGGXFXXXKIXXXPPXGXXXXXXPLXXXKPP-PXXGGXXXXG 820
PPPPPP P GGG + PP PP P GG G
Sbjct: 31 PPPPPPSPCGCGGG--GGLALPQLPPLSLPSLGGGGGCCPPPAPACGGGCGGG 81
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = +2
Query: 644 PXXGXFXPPPPPPXPXXXGGGXFXXXKIXXXPPXGXXXXXXPLXXXKPPP 793
P G PPPPPP P GG PP G P+ PP
Sbjct: 763 PPPGGCPPPPPPPPPGGFKGGP------PPPPPPGMFAPMAPVIPDYLPP 806
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +3
Query: 669 PPPPPXXFXGGGXXFXPXKXXGXXPXXXXXXXPPXXXXNPPXXGG 803
PPPPP G P G P PP PP GG
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGG 757
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -3
Query: 805 PPPXXGGFXXXKGGXXXXXXXGXXPXNFXGXKXXPPP 695
PPP GG GG G P G PPP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = +2
Query: 644 PXXGXFXPPPPPPXPXXXGGGXFXXXKIXXXPPXGXXXXXXPLXXXKPPP 793
P G PPPPPP P GG PP G P+ PP
Sbjct: 763 PPPGGCPPPPPPPPPGGFKGGP------PPPPPPGMFAPMAPVIPDYLPP 806
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +3
Query: 669 PPPPPXXFXGGGXXFXPXKXXGXXPXXXXXXXPPXXXXNPPXXGG 803
PPPPP G P G P PP PP GG
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGG 757
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -3
Query: 805 PPPXXGGFXXXKGGXXXXXXXGXXPXNFXGXKXXPPP 695
PPP GG GG G P G PPP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = +2
Query: 644 PXXGXFXPPPPPPXPXXXGGGXFXXXKIXXXPPXGXXXXXXPLXXXKPPP 793
P G PPPPPP P GG PP G P+ PP
Sbjct: 346 PPPGGCPPPPPPPPPGGFKGGP------PPPPPPGMFAPMAPVIPDYLPP 389
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +3
Query: 669 PPPPPXXFXGGGXXFXPXKXXGXXPXXXXXXXPPXXXXNPPXXGG 803
PPPPP G P G P PP PP GG
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGG 340
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -3
Query: 805 PPPXXGGFXXXKGGXXXXXXXGXXPXNFXGXKXXPPP 695
PPP GG GG G P G PPP
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 347
>Z81142-5|CAB03507.1| 319|Caenorhabditis elegans Hypothetical
protein ZK1037.8 protein.
Length = 319
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1
Query: 79 KTPSFRKSKIWDIF*FLFW 135
KTPS+ KS IW +F FW
Sbjct: 35 KTPSYMKSVIWSLFNLHFW 53
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 644 PXXGXFXPPPPPPXPXXXGGG 706
P G PPPPPP P GG
Sbjct: 642 PAVGAGAPPPPPPPPPSGAGG 662
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 644 PXXGXFXPPPPPPXPXXXGGG 706
P G PPPPPP P GG
Sbjct: 468 PAVGAGAPPPPPPPPPSGAGG 488
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 29.5 bits (63), Expect = 3.1
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 665 PPPPPPXPXXXGGG 706
PPPPPP P GGG
Sbjct: 63 PPPPPPPPAPIGGG 76
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 29.5 bits (63), Expect = 3.1
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 665 PPPPPPXPXXXGGG 706
PPPPPP P GGG
Sbjct: 63 PPPPPPPPAPIGGG 76
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/60 (30%), Positives = 18/60 (30%)
Frame = +2
Query: 644 PXXGXFXPPPPPPXPXXXGGGXFXXXKIXXXPPXGXXXXXXPLXXXKPPPXXGGXXXXGG 823
P PPPPPP P G PP P PPP G GG
Sbjct: 290 PPSSGMWPPPPPPPPGRTPG---PPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGG 346
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = +3
Query: 645 PXXGXFXPPPPPPXXFXGGGXXFXPXKXXGXXPXXXXXXXPPXXXXNPPXXGG 803
P G PPPPP + GG P + P PP PP G
Sbjct: 328 PGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGP-GMYPPPPPSRPPAPPSGHG 379
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/60 (30%), Positives = 18/60 (30%)
Frame = +2
Query: 644 PXXGXFXPPPPPPXPXXXGGGXFXXXKIXXXPPXGXXXXXXPLXXXKPPPXXGGXXXXGG 823
P PPPPPP P G PP P PPP G GG
Sbjct: 300 PPSSGMWPPPPPPPPGRTPG---PPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGG 356
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = +3
Query: 645 PXXGXFXPPPPPPXXFXGGGXXFXPXKXXGXXPXXXXXXXPPXXXXNPPXXGG 803
P G PPPPP + GG P + P PP PP G
Sbjct: 338 PGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGP-GMYPPPPPSRPPAPPSGHG 389
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/50 (32%), Positives = 16/50 (32%), Gaps = 3/50 (6%)
Frame = +3
Query: 666 PPPPPP---XXFXGGGXXFXPXKXXGXXPXXXXXXXPPXXXXNPPXXGGG 806
PPPPPP G G P P PP PP GG
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 287
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/50 (32%), Positives = 16/50 (32%), Gaps = 3/50 (6%)
Frame = +3
Query: 666 PPPPPP---XXFXGGGXXFXPXKXXGXXPXXXXXXXPPXXXXNPPXXGGG 806
PPPPPP G G P P PP PP GG
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 308
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/50 (32%), Positives = 16/50 (32%), Gaps = 3/50 (6%)
Frame = +3
Query: 666 PPPPPP---XXFXGGGXXFXPXKXXGXXPXXXXXXXPPXXXXNPPXXGGG 806
PPPPPP G G P P PP PP GG
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 293
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 25.8 bits (54), Expect(2) = 4.7
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +2
Query: 644 PXXGXFXPPPPPPXP 688
P G PPPPPP P
Sbjct: 240 PPVGAGAPPPPPPPP 254
Score = 21.4 bits (43), Expect(2) = 4.7
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = +2
Query: 665 PPPPPPXPXXXGGG 706
PPPPPP G
Sbjct: 251 PPPPPPAQLMASSG 264
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 25.8 bits (54), Expect(2) = 4.8
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +2
Query: 644 PXXGXFXPPPPPPXP 688
P G PPPPPP P
Sbjct: 226 PPVGAGAPPPPPPPP 240
Score = 21.4 bits (43), Expect(2) = 4.8
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = +2
Query: 665 PPPPPPXPXXXGGG 706
PPPPPP G
Sbjct: 237 PPPPPPAQLMASSG 250
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 26.6 bits (56), Expect(2) = 4.8
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -3
Query: 769 GGXXXXXXXGXXPXNFXGXKXXPPPXXXXGGGGGG 665
GG G P F G P GGGGGG
Sbjct: 262 GGASTMTAMGGGPSAFGGAPPPPSGSAMGGGGGGG 296
Score = 20.6 bits (41), Expect(2) = 4.8
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3
Query: 682 GGGGGGXKXPXXG 644
GGGGGG K G
Sbjct: 329 GGGGGGAKSGGGG 341
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 25.8 bits (54), Expect(2) = 4.9
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +2
Query: 644 PXXGXFXPPPPPPXP 688
P G PPPPPP P
Sbjct: 226 PPVGAGAPPPPPPPP 240
Score = 21.4 bits (43), Expect(2) = 4.9
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = +2
Query: 665 PPPPPPXPXXXGGG 706
PPPPPP G
Sbjct: 237 PPPPPPAQLMASSG 250
>U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific
family, class qprotein 3 protein.
Length = 265
Score = 26.6 bits (56), Expect(2) = 5.0
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -3
Query: 769 GGXXXXXXXGXXPXNFXGXKXXPPPXXXXGGGGGG 665
GG G P F G P GGGGGG
Sbjct: 156 GGASTMTAMGGGPSAFGGAPPPPSGSAMGGGGGGG 190
Score = 20.6 bits (41), Expect(2) = 5.0
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3
Query: 682 GGGGGGXKXPXXG 644
GGGGGG K G
Sbjct: 223 GGGGGGAKSGGGG 235
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 28.7 bits (61), Expect = 5.3
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 644 PXXGXFXPPPPPPXPXXXGG 703
P G + PPPPP P GG
Sbjct: 46 PCGGGYEAPPPPPPPSYAGG 65
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 644 PXXGXFXPPPPPPXPXXXGGG 706
P G PPPPPP P G G
Sbjct: 45 PMCGCAPPPPPPPPPPMCGCG 65
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 23.8 bits (49), Expect(2) = 6.8
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 653 GXFXPPPPPPXP 688
G PPPPPP P
Sbjct: 62 GCGIPPPPPPPP 73
Score = 23.0 bits (47), Expect(2) = 6.8
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 668 PPPPPXPXXXGGG 706
PPPPP P G G
Sbjct: 66 PPPPPPPPQCGCG 78
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 644 PXXGXFXPPPPPPXPXXXGGG 706
P G PPPPPP P G G
Sbjct: 58 PPIGYGAPPPPPPPPAFGGLG 78
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 644 PXXGXFXPPPPPPXPXXXGGG 706
P G PPPPPP P G G
Sbjct: 58 PPIGYGAPPPPPPPPAFGGLG 78
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 644 PXXGXFXPPPPPPXPXXXGGG 706
P G PPPPPP P G G
Sbjct: 58 PPIGYGAPPPPPPPPAFGGLG 78
>Z81125-3|CAB03384.1| 790|Caenorhabditis elegans Hypothetical
protein T22A3.5 protein.
Length = 790
Score = 24.6 bits (51), Expect(2) = 9.8
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 665 PPPPPPXPXXXG 700
PPPPPP P G
Sbjct: 751 PPPPPPQPMEYG 762
Score = 21.4 bits (43), Expect(2) = 9.8
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +2
Query: 644 PXXGXFXPPPPPP 682
P PPPPPP
Sbjct: 743 PTFSTSAPPPPPP 755
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,287,195
Number of Sequences: 27780
Number of extensions: 252704
Number of successful extensions: 2460
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1242
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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