Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_I05
         (891 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   3.1  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    25   3.1  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   9.4  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 20/75 (26%), Positives = 24/75 (32%)
 Frame = -2

Query: 788 GGGGXXXGGGRGTTRFXXXXFXXXGPPRPXXXXDFXGVXRXAXPPPGGGFXXXXXXGGGX 609
           GGGG   GGG G+              +        G      P  GGG       GGG 
Sbjct: 169 GGGGGGGGGGAGSFAAALRNLAKQADVKEDEPGAGGGGSGGGAPGGGGGSSGGPGPGGG- 227

Query: 608 XXKXGXGXGGXKNRR 564
               G G G  ++ R
Sbjct: 228 ----GGGGGRDRDHR 238


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 10/30 (33%), Positives = 11/30 (36%)
 Frame = +3

Query: 582 PXXPPXFXXXPPPXLXXXXKTPPXGXXXXP 671
           P  PP     PPP +      PP G    P
Sbjct: 108 PLPPPMMGMRPPPMMVPTMGMPPMGLGMRP 137


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +1

Query: 742 NLVVPLPPPXXXPPPP 789
           NL    PPP   PPPP
Sbjct: 575 NLPNAQPPPAPPPPPP 590


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 554,303
Number of Sequences: 2352
Number of extensions: 8554
Number of successful extensions: 48
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95920632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)