Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_H09
(905 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 36 0.053
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 36 0.053
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 31 1.1
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 31 1.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 1.7
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 1.7
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 1.8
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 30 2.6
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 30 2.6
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 30 2.6
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 29 3.5
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 3.5
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 4.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 4.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 4.6
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 6.0
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 29 6.0
U58758-7|AAO38576.1| 220|Caenorhabditis elegans Hypothetical pr... 29 6.0
U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical pr... 29 6.0
U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical pr... 29 6.0
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 6.0
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 6.0
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 28 8.0
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 28 8.0
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 35.5 bits (78), Expect = 0.053
Identities = 26/99 (26%), Positives = 28/99 (28%), Gaps = 1/99 (1%)
Frame = +1
Query: 436 PPPXGXGXFFLXPXPXPPXKXPGPRVXXXXXXFSPPQXGXXGFPQXXGXPXKKPFXQXXP 615
PPP + P P PP + PGP PP G P G P P P
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGP--PGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYP 344
Query: 616 KXXXXXXXXXXXXXS-XRXPPPKXXXKXXPPKXRGGQPP 729
PPP PP G PP
Sbjct: 345 GGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPP 383
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 35.5 bits (78), Expect = 0.053
Identities = 26/99 (26%), Positives = 28/99 (28%), Gaps = 1/99 (1%)
Frame = +1
Query: 436 PPPXGXGXFFLXPXPXPPXKXPGPRVXXXXXXFSPPQXGXXGFPQXXGXPXKKPFXQXXP 615
PPP + P P PP + PGP PP G P G P P P
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGP--PGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYP 354
Query: 616 KXXXXXXXXXXXXXS-XRXPPPKXXXKXXPPKXRGGQPP 729
PPP PP G PP
Sbjct: 355 GGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPP 393
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/54 (37%), Positives = 21/54 (38%)
Frame = +2
Query: 437 PPXGXXGXFFWXPXPXPPXXXXGPGXGGGGXGFXPPXGGXRXSPKXXGXPXKNL 598
PP G G P PP PG GGG G PP R P G P N+
Sbjct: 782 PPRGGPGA------PPPPGMRPPPGAPGGGGGMYPPLIPTRPGP---GGPPPNM 826
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/54 (37%), Positives = 21/54 (38%)
Frame = +2
Query: 437 PPXGXXGXFFWXPXPXPPXXXXGPGXGGGGXGFXPPXGGXRXSPKXXGXPXKNL 598
PP G G P PP PG GGG G PP R P G P N+
Sbjct: 782 PPRGGPGA------PPPPGMRPPPGAPGGGGGMYPPLIPTRPGP---GGPPPNM 826
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +2
Query: 434 PPPXGXXGXFFWXPXPXPPXXXXGPGXGGGGXGFXPPXGGXRXSP 568
PPP G P P PP P GG PP GG P
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGL-PPISGGPPPPPPPPGGCPPPP 772
Score = 27.1 bits (57), Expect(2) = 1.7
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +2
Query: 701 PPNXGGXNPXRXXKIPRVSXXXXXXXXPPLSPPRXXKKXPXPXFPP 838
PP GG P P PP PP K P P PP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 21.8 bits (44), Expect(2) = 1.7
Identities = 12/38 (31%), Positives = 12/38 (31%)
Frame = +2
Query: 473 PXPXPPXXXXGPGXGGGGXGFXPPXGGXRXSPKXXGXP 586
P P P GP G P GG P G P
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP 752
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +2
Query: 434 PPPXGXXGXFFWXPXPXPPXXXXGPGXGGGGXGFXPPXGGXRXSP 568
PPP G P P PP P GG PP GG P
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGL-PPISGGPPPPPPPPGGCPPPP 772
Score = 27.1 bits (57), Expect(2) = 1.7
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +2
Query: 701 PPNXGGXNPXRXXKIPRVSXXXXXXXXPPLSPPRXXKKXPXPXFPP 838
PP GG P P PP PP K P P PP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 21.8 bits (44), Expect(2) = 1.7
Identities = 12/38 (31%), Positives = 12/38 (31%)
Frame = +2
Query: 473 PXPXPPXXXXGPGXGGGGXGFXPPXGGXRXSPKXXGXP 586
P P P GP G P GG P G P
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP 752
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +2
Query: 434 PPPXGXXGXFFWXPXPXPPXXXXGPGXGGGGXGFXPPXGGXRXSP 568
PPP G P P PP P GG PP GG P
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGGL-PPISGGPPPPPPPPGGCPPPP 355
Score = 27.1 bits (57), Expect(2) = 1.8
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +2
Query: 701 PPNXGGXNPXRXXKIPRVSXXXXXXXXPPLSPPRXXKKXPXPXFPP 838
PP GG P P PP PP K P P PP
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
Score = 21.8 bits (44), Expect(2) = 1.8
Identities = 12/38 (31%), Positives = 12/38 (31%)
Frame = +2
Query: 473 PXPXPPXXXXGPGXGGGGXGFXPPXGGXRXSPKXXGXP 586
P P P GP G P GG P G P
Sbjct: 298 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP 335
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/38 (44%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = -3
Query: 894 PRGNPXX-GGXGXRXPPXPXGGKXGXGXFFXXRGGERG 784
P G P GG G + PP P GG G RGG RG
Sbjct: 140 PAGPPGAVGGPGPKGPPGPPGGPGELGG--PGRGGNRG 175
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/38 (44%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = -3
Query: 894 PRGNPXX-GGXGXRXPPXPXGGKXGXGXFFXXRGGERG 784
P G P GG G + PP P GG G RGG RG
Sbjct: 140 PAGPPGAVGGPGPKGPPGPPGGPGELGG--PGRGGNRG 175
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +2
Query: 437 PPXGXXGXFFWXPXPXPPXXXXGPGXGGGGXGFXPPXGGXRXSPKXXGXP 586
PP G G P PP PG GGG G PP R G P
Sbjct: 782 PPRGGPGA------PPPPGMRPPPGAPGGGGGMYPPLIPTRVPTPSNGAP 825
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = +2
Query: 434 PPPXGXXGXFFWXPXPXPPXXXXGPGXGGGGXGFXPPXGGXRXSPKXXGXP 586
PP G G F PP P GG G+ PP G +P G P
Sbjct: 381 PPQSGPPGAF-----APPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPP 426
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/49 (38%), Positives = 20/49 (40%), Gaps = 4/49 (8%)
Frame = +2
Query: 434 PPPXGXXGXFFWXPXPXPPXXXXGPGXGG--GGXGF--XPPXGGXRXSP 568
PPP G G + P PP PG G GG F P G R SP
Sbjct: 435 PPPPGGPGAYGPPPTGFPPVGAPPPGAAGAPGGNPFARGPSATGYRQSP 483
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +2
Query: 437 PPXGXXGXFFWXPXPXPPXXXXGPGXGGGGXGFXPPXGGXRXSPKXXGXP 586
PP G G P PP PG GGG G PP R G P
Sbjct: 782 PPRGGPGA------PPPPGMRPPPGAPGGGGGMYPPLIPTRVPTPSNGAP 825
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/61 (32%), Positives = 20/61 (32%), Gaps = 3/61 (4%)
Frame = +2
Query: 380 FFFPXXGGXXXXFXXXKXPPPXGXXGXFFWXPXPXPPXXXXG---PGXGGGGXGFXPPXG 550
F P GG PPP G G P P P GGGG G P G
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPPCGCGGPSL-PPLQLPRFELPRLSLPSFGGGGCGGPAPCG 75
Query: 551 G 553
G
Sbjct: 76 G 76
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = -1
Query: 605 WXKGFXXGFPXFWGXPXXPXWGGENXXXXXXTRGPGXXXGGXGXGXKKKXPXPXGGG 435
W G G P WG WGG G G G G G GGG
Sbjct: 20 WGPGGWGGGPGRWGGWGGNRWGGGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGG 76
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +1
Query: 436 PPPXGXGXFFLXPXPXPPXKXPGPRVXXXXXXFSPPQXGXXGFPQXXGXPXKKP 597
PPP G P P P PR PPQ G P G P P
Sbjct: 280 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 333
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +1
Query: 436 PPPXGXGXFFLXPXPXPPXKXPGPRVXXXXXXFSPPQXGXXGFPQXXGXPXKKP 597
PPP G P P P PR PPQ G P G P P
Sbjct: 301 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 354
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +1
Query: 436 PPPXGXGXFFLXPXPXPPXKXPGPRVXXXXXXFSPPQXGXXGFPQXXGXPXKKP 597
PPP G P P P PR PPQ G P G P P
Sbjct: 286 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 339
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 473 PXPXPPXXXXGPGXGGGGXGFXPPXGG 553
P P PP G G GGGG G GG
Sbjct: 111 PPPPPPACGGGCGGGGGGCGGGCGGGG 137
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/40 (42%), Positives = 18/40 (45%)
Frame = -3
Query: 903 PXPPRGNPXXGGXGXRXPPXPXGGKXGXGXFFXXRGGERG 784
P P G GG G + PP P GG G RGG RG
Sbjct: 145 PVGPAG--PAGGPGPKGPPGPPGGHGEPGP--AGRGGPRG 180
>U58758-7|AAO38576.1| 220|Caenorhabditis elegans Hypothetical
protein ZK1127.9d protein.
Length = 220
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 3/52 (5%)
Frame = +2
Query: 440 PXGXXGXFFWXPXPXPPXXXXG---PGXGGGGXGFXPPXGGXRXSPKXXGXP 586
P G G FF P G PG G G GF P +P+ G P
Sbjct: 43 PPGGAGSFFGVPPAARGRGGPGMAPPGFAGRGRGFATPGMSSGFAPRGRGMP 94
>U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical
protein ZK1127.9a protein.
Length = 914
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 3/52 (5%)
Frame = +2
Query: 440 PXGXXGXFFWXPXPXPPXXXXG---PGXGGGGXGFXPPXGGXRXSPKXXGXP 586
P G G FF P G PG G G GF P +P+ G P
Sbjct: 52 PPGGAGSFFGVPPAARGRGGPGMAPPGFAGRGRGFATPGMSSGFAPRGRGMP 103
>U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical
protein ZK1127.9b protein.
Length = 905
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 3/52 (5%)
Frame = +2
Query: 440 PXGXXGXFFWXPXPXPPXXXXG---PGXGGGGXGFXPPXGGXRXSPKXXGXP 586
P G G FF P G PG G G GF P +P+ G P
Sbjct: 43 PPGGAGSFFGVPPAARGRGGPGMAPPGFAGRGRGFATPGMSSGFAPRGRGMP 94
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +1
Query: 400 GGXGXFXXXKKXPPPXGXGXFFLXPXPXPPXKXPG 504
G G PPP G G F P P PP PG
Sbjct: 652 GSGGGSSMPMPVPPPGGLGGFM--PPPPPPPPMPG 684
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +1
Query: 400 GGXGXFXXXKKXPPPXGXGXFFLXPXPXPPXKXPG 504
G G PPP G G F P P PP PG
Sbjct: 652 GSGGGSSMPMPVPPPGGLGGFM--PPPPPPPPMPG 684
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +2
Query: 440 PXGXXGXFFWXPXPXPPXXXXGPGXGGGGXGFXPP 544
P G G P P PP G G GGGG PP
Sbjct: 20 PSGGGGGCGCAPPPPPPAC--GCGGGGGGYAAPPP 52
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 28.3 bits (60), Expect = 8.0
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 485 PPXXXXGPGXGGGGXGFXPPXGG 553
PP GPG GGGG G GG
Sbjct: 181 PPSNDFGPGGGGGGMGGGGGSGG 203
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.151 0.541
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,044,685
Number of Sequences: 27780
Number of extensions: 233969
Number of successful extensions: 978
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 832
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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