Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_H08
         (944 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0059 - 6432945-6433115,6433975-6434061,6434585-6434787,643...    29   4.1  
01_01_0082 + 625198-625719                                             29   7.1  

>02_02_0059 -
           6432945-6433115,6433975-6434061,6434585-6434787,
           6435281-6435392,6435473-6435517,6435622-6435726,
           6435946-6435996,6436026-6436103,6437258-6437313,
           6437784-6437853,6438288-6438392,6438525-6438637,
           6439354-6439534,6439635-6440390
          Length = 710

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = -1

Query: 671 PPPGXXXXXXXPPPXXXFFFXXGGGXXPPPXF 576
           PPPG       PPP   F +  G G  PPP +
Sbjct: 66  PPPGMLHGEPYPPPDR-FGYGGGRGYPPPPNY 96


>01_01_0082 + 625198-625719
          Length = 173

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 15/50 (30%), Positives = 18/50 (36%)
 Frame = -3

Query: 708 FFXPPKXXXXPXPPPXXXXXXXXPPPXXXFFFXXGGGGXXPPPFFXKXXG 559
           ++ PP       PPP        PPP        GGGG  P P +    G
Sbjct: 72  YYPPPSPPPVAYPPPTTPSTNCPPPP-------YGGGGYNPTPSYNPTPG 114


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,368,223
Number of Sequences: 37544
Number of extensions: 479188
Number of successful extensions: 1002
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2717819680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)