Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_H07
         (894 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0530 + 21807464-21807685,21807809-21808207,21808312-21808818     29   3.8  
06_03_0654 + 23173253-23173812,23174365-23175262                       29   5.0  
01_06_0152 - 27041070-27041217,27041939-27041993,27043321-27043633     29   5.0  
02_04_0448 - 23001579-23001683,23001783-23002382,23002479-230026...    29   6.6  
07_01_1157 + 10954619-10954835,10956078-10957114                       28   8.7  
05_07_0283 - 28937027-28937110,28937211-28937549,28937641-289377...    28   8.7  
01_07_0187 + 41862342-41862622,41862730-41862912,41863236-418632...    28   8.7  
01_01_0975 - 7686297-7686458,7687117-7687245,7687754-7687831,768...    28   8.7  

>06_03_0530 + 21807464-21807685,21807809-21808207,21808312-21808818
          Length = 375

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 18/67 (26%), Positives = 25/67 (37%), Gaps = 1/67 (1%)
 Frame = -1

Query: 687 GWLRHPRPCS**SAP*WARSSAGT-SPCNACAFPEPAPGTRTLVEDLPVVPRKYPXXXXR 511
           G +R    C+    P W     G  S CNAC   +       +   LP  P         
Sbjct: 183 GVIRVCSDCNTTKTPLWRSGPCGPKSLCNACGIRQRKARRAMMASGLPASPNAAGPKAAA 242

Query: 510 HAGSAAI 490
           H+G+AA+
Sbjct: 243 HSGAAAV 249


>06_03_0654 + 23173253-23173812,23174365-23175262
          Length = 485

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = -2

Query: 758 DPCL*MEGGLYGPQYVCWYFNGYVV--GYGIRVHAPDEARRNGREALL 621
           DPCL ME    G      ++N Y +  G+GIRV      RR G E L+
Sbjct: 64  DPCLGMEFESDGAARA--FYNAYALRLGFGIRVARSRSERRKGVELLI 109


>01_06_0152 - 27041070-27041217,27041939-27041993,27043321-27043633
          Length = 171

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 12/53 (22%), Positives = 26/53 (49%)
 Frame = -3

Query: 643 VMGEKLCWDISM*RLRISRACTRYEDAC*RSSSGTPEVSSPLIATRWKCGNMI 485
           ++G   C D+   ++R+  +  +  DAC ++      ++S  +AT W  G  +
Sbjct: 62  LVGAPACGDVMKLQIRVDESSGKIVDACFKTFGCGSAIASSSVATEWVKGKQM 114


>02_04_0448 -
           23001579-23001683,23001783-23002382,23002479-23002628,
           23002788-23003015,23003188-23003302,23003392-23004659,
           23006621-23006692
          Length = 845

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +2

Query: 701 STNKHIADHIVHPPFXD-KDPWECPMPEP 784
           STNK + +H++H    + K+P   P+P P
Sbjct: 660 STNKELLEHLIHHQIDEPKNPEPAPLPVP 688


>07_01_1157 + 10954619-10954835,10956078-10957114
          Length = 417

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +3

Query: 297 APYEVPQFPIEQIEKKLLIQRQLNVKAA 380
           +PY  PQFP   +E+K+ I+R L V+ +
Sbjct: 141 SPYS-PQFPQNNLERKIQIRRMLQVQGS 167


>05_07_0283 -
           28937027-28937110,28937211-28937549,28937641-28937754,
           28937843-28937955,28939050-28939087,28939315-28939478,
           28939746-28939794,28940986-28941152
          Length = 355

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -3

Query: 298 AESSLGSSRGASAPTALVGLSLPTRLFNSGVVLPG 194
           +E  +G SRG +A T +V L+   +L   GV  PG
Sbjct: 3   SEDVVGKSRGDTAVTTIVNLAEEAKLAREGVKGPG 37


>01_07_0187 +
           41862342-41862622,41862730-41862912,41863236-41863299,
           41863547-41863756,41863850-41864035,41864180-41864478,
           41864584-41864731,41864798-41864863,41864945-41865217,
           41865523-41865741,41865864-41866013
          Length = 692

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = -2

Query: 569 GRLLKIFQWYPGSILAADSDTLEVRQYDLVIVIIGDPEPSRLFKHGCRACFA 414
           GRL   F+W   ++  ++ D L     D ++V+       RLFK G + CFA
Sbjct: 56  GRLTPSFRWIRAALRLSEDDVLRRHGLDALVVV-------RLFKFGIK-CFA 99


>01_01_0975 -
           7686297-7686458,7687117-7687245,7687754-7687831,
           7688011-7688469,7690648-7690788,7691771-7692421
          Length = 539

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 17/47 (36%), Positives = 21/47 (44%)
 Frame = -1

Query: 675 HPRPCS**SAP*WARSSAGTSPCNACAFPEPAPGTRTLVEDLPVVPR 535
           HP P        W   +AG  P  A A P P+P  +  +  LPV PR
Sbjct: 340 HPPPFCRPPLHVWGHPTAGVEPTTAAAPPPPSPHAQPPL--LPVWPR 384


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,993,704
Number of Sequences: 37544
Number of extensions: 547831
Number of successful extensions: 1837
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1834
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)