Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_H07
         (894 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ404478-1|CAC16182.1|   77|Anopheles gambiae putative GATA fact...    27   0.77 
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    24   5.4  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    24   7.2  

>AJ404478-1|CAC16182.1|   77|Anopheles gambiae putative GATA factor
           protein.
          Length = 77

 Score = 27.1 bits (57), Expect = 0.77
 Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
 Frame = -1

Query: 663 CS**SAP*WARSSAGTSPCNACA-FPEPAPGT 571
           C     P W R   G + CNACA +    PGT
Sbjct: 1   CGSSDTPLWRRDIVGHTLCNACALYTRQNPGT 32


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = -1

Query: 663 CS**SAP*WARSSAGTSPCNAC 598
           C   S P W R   G   CNAC
Sbjct: 123 CGAISTPLWRRDGTGHYLCNAC 144


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 557 KIFQWYPGSILAADSDTLEVRQ 492
           K+F W+ G+  A + D  E+R+
Sbjct: 373 KVFHWFQGARSAPERDPAELRR 394


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 889,360
Number of Sequences: 2352
Number of extensions: 18504
Number of successful extensions: 33
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96334083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)