Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_H06
(935 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1136 + 24218601-24218734,24218769-24219906 33 0.25
11_02_0065 - 7938007-7938393,7939292-7939435,7940597-7940665,794... 33 0.43
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 33 0.43
02_05_0686 - 30900748-30902167,30903442-30904742 33 0.43
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 0.71
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 29 1.2
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 31 1.3
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 31 1.7
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 4.0
03_03_0118 + 14597863-14597929,14598844-14599806,14599909-145999... 29 4.0
11_06_0453 + 23781803-23781814,23782700-23782781,23783334-23784160 29 5.3
04_04_0009 + 22134160-22134696 29 5.3
07_01_0974 + 8211602-8212051 29 7.0
07_01_0080 + 587674-588510 29 7.0
10_08_0868 - 21171425-21171826 28 9.3
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 28 9.3
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 33.5 bits (73), Expect = 0.25
Identities = 20/48 (41%), Positives = 21/48 (43%)
Frame = -2
Query: 589 PXXGXXKXPPXGGGKXXPPPXXPGAXXFXGGXXXGGXKKXPXXPXGGG 446
P G PP GGG PP PGA GG GG + P GGG
Sbjct: 100 PLGGGGARPPGGGGGGGPPSLPPGA----GG---GGGARPPAPGGGGG 140
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 498 PPXKXXAPGXXGGGXXXPPPXGGXFXXP 581
PP APG GGG PP GG P
Sbjct: 91 PPGGGGAPGPLGGGGARPPGGGGGGGPP 118
>11_02_0065 -
7938007-7938393,7939292-7939435,7940597-7940665,
7940762-7940809,7941488-7941584,7941688-7941767,
7941841-7941912,7942256-7942350,7943903-7943984,
7945176-7945209,7945255-7945262,7945657-7946058
Length = 505
Score = 32.7 bits (71), Expect = 0.43
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = +1
Query: 448 PPPXGXGXFFXXPXPXPPPKXPXPXXXGGGXGFXPP 555
PPP F P P PPP P GGG GF P
Sbjct: 67 PPPPPAAFFAAVPPPPPPPFEYYP-AVGGGGGFGAP 101
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 32.7 bits (71), Expect = 0.43
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +1
Query: 448 PPPXGXGXFFXXPXPXPPPKXPXPXXXGGGXGFXPP 555
PPP G F P P PPP P P G PP
Sbjct: 42 PPPQGAPPPFLAPPPPPPPGPPPPHQPQFNFGPGPP 77
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 32.7 bits (71), Expect = 0.43
Identities = 20/55 (36%), Positives = 20/55 (36%), Gaps = 2/55 (3%)
Frame = +2
Query: 440 KXPPPPXXXGXFFXXPXPXPPXKXPGPXXXG--GGXXFXPPXGGXFXXPXXGGKP 598
K PPPP P P P P P G GG PP GG P G P
Sbjct: 342 KGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPPAAPGVP 396
Score = 32.3 bits (70), Expect = 0.57
Identities = 18/46 (39%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = +3
Query: 447 PPPXGXXGFFFXPPXXXP-PXKXXAPGXXGGGXXXPPPXGGXFXXP 581
PPP G PP P P PG GG PPP GG P
Sbjct: 345 PPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPP 390
Score = 29.5 bits (63), Expect = 4.0
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +1
Query: 448 PPPXGXGXFFXXPXPXPPPKXPXPXXXGGGXGFXPPXXGXXXXPXXWG 591
PPP P P PPPK P G PP G P G
Sbjct: 314 PPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKG 361
Score = 29.5 bits (63), Expect = 4.0
Identities = 17/39 (43%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Frame = +1
Query: 448 PPPXGXGXFFXXPXPXPPPKXPXP---XXXGGGXGFXPP 555
PPP G P P PPPK P P GG G PP
Sbjct: 346 PPPPAKG-----PPPPPPPKGPSPPPPPPPGGKKGGPPP 379
Score = 28.7 bits (61), Expect = 7.0
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +2
Query: 446 PPPPXXXGXFFXXPXPXPPXKXPGPXXXGGGXXFXPPXGGXFXXPXXGGKP 598
PPPP P P PP P P G P G P G P
Sbjct: 314 PPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSP 364
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.1 bits (62), Expect = 5.3
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 448 PPPXGXGXFFXXPXPXPPPKXP 513
PPP G F P P PPP P
Sbjct: 552 PPPSGNKPAFSPPPPPPPPPPP 573
Score = 28.7 bits (61), Expect = 7.0
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +3
Query: 447 PPPXGXXGFFFXPPXXXPPXKXXAPGXXGGGXXXPPP 557
PPP G F PP PP P PPP
Sbjct: 552 PPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPP 588
Score = 26.6 bits (56), Expect(2) = 0.71
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 448 PPPXGXGXFFXXPXPXPPP 504
PP G G F P P PPP
Sbjct: 653 PPAPGIGNKFPAPPPPPPP 671
Score = 23.8 bits (49), Expect(2) = 0.71
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +1
Query: 484 PXPXPPPKXPXPXXXGGGXGFXPP 555
P P PPP P G G PP
Sbjct: 690 PPPPPPPLPPANRTNGPGVPSAPP 713
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 450 PPXGXXGFFFXPPXXXPPXKXXAPGXXGGGXXXPPPXG 563
P G PP PP AP G G PPP G
Sbjct: 338 PSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPPPG 375
Score = 28.7 bits (61), Expect(2) = 1.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 490 PXPPPKXPXPXXXGGGXGFXPP 555
P PPP P P G G G PP
Sbjct: 331 PAPPPPAPSPSAAGAGSGPPPP 352
Score = 21.0 bits (42), Expect(2) = 1.2
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +1
Query: 448 PPPXGXGXFFXXPXPXPPPKXP 513
P P G G P PPP P
Sbjct: 307 PLPPGAGAGAGTGAPPPPPAHP 328
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -1
Query: 578 GXKXXPXXGGXXPXPPPXXXGXGFXGGGXGXG 483
G P GG P PP G G GGG G G
Sbjct: 381 GYGGRPMPGGGGPGAPPPYHGGGGGGGGGGGG 412
Score = 28.7 bits (61), Expect = 7.0
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -1
Query: 578 GXKXXPXXGGXXPXPPPXXXGXGFXGGGXGXG 483
G + P GG PP G G GGG G G
Sbjct: 383 GGRPMPGGGGPGAPPPYHGGGGGGGGGGGGGG 414
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 30.7 bits (66), Expect = 1.7
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +1
Query: 484 PXPXPPPKXPXPXXXGGGXG 543
P P PPP+ P P GGG G
Sbjct: 9 PPPPPPPQHPPPPQAGGGGG 28
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.5 bits (63), Expect = 4.0
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = +2
Query: 446 PPPPXXXGXFFXXPXPXPPXKXPGPXXXGGGXXFXPPXGGXFXXPXXGGK 595
PPPP G P P P P GG PP GG GG+
Sbjct: 1186 PPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGP--PPPPGGRGLPAPPGGR 1233
Score = 29.5 bits (63), Expect = 4.0
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +1
Query: 448 PPPXGXGXFFXXPXPXPPPKXPXPXXXGGGXGFXPPXXGXXXXP 579
PPP G G P P P P P GG PP G P
Sbjct: 1187 PPPRGHGGVGGPPTPPGAPAPPMPPGVPGG---PPPPPGGRGLP 1227
>03_03_0118 +
14597863-14597929,14598844-14599806,14599909-14599936,
14600288-14600666
Length = 478
Score = 29.5 bits (63), Expect = 4.0
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Frame = -3
Query: 597 GFPPXXGXXXXPPXGGXKXXPPPXXXGPGXFXG-GXGXGXXKKXPXXXGGG 448
GF P G PP GG PP PG F G G G G G
Sbjct: 403 GFTPPAGGFGTPPLGGF-GTPPSGFGPPGSFNGSGSSFGPSSAFSPYGGAG 452
>11_06_0453 + 23781803-23781814,23782700-23782781,23783334-23784160
Length = 306
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +1
Query: 475 FXXPXPXPPPKXPXPXXXGGGXGFXPPXXG 564
+ P PPP P P GGG G P G
Sbjct: 258 YSVPSARPPPLLPPPCYSGGGGGGYTPYCG 287
>04_04_0009 + 22134160-22134696
Length = 178
Score = 29.1 bits (62), Expect = 5.3
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = -1
Query: 554 GGXXPXPPPXXXGXGFXGGGXGXGXKKKXPXPXGGG 447
GG PPP G GGG G ++ GGG
Sbjct: 59 GGSTAPPPPPPSSSGKSGGGGGSNIREAAASGGGGG 94
>07_01_0974 + 8211602-8212051
Length = 149
Score = 28.7 bits (61), Expect = 7.0
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +3
Query: 447 PPPXGXXGFFFXPPXXXPPXKXXAPGXXGGGXXXPP 554
PPP +++ PP PP G GGG PP
Sbjct: 37 PPPLVQQFYYYSPP---PPSSPVGGGGTGGGGPSPP 69
>07_01_0080 + 587674-588510
Length = 278
Score = 28.7 bits (61), Expect = 7.0
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 412 GXXGXFXXXKKXPPPXGXGXFFXXPXPXPPPKXPXP 519
G G F PPP P P PPP P P
Sbjct: 83 GGDGMFRRPPPPPPPPPSSGSPPPPPPPPPPPPPPP 118
>10_08_0868 - 21171425-21171826
Length = 133
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 484 PXPXPPPKXPXPXXXGGGXGFXP 552
P P P P P P GGG G P
Sbjct: 29 PTPKPKPPAPRPPTPGGGAGSCP 51
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 28.3 bits (60), Expect = 9.3
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = +1
Query: 448 PPPXGXGXFFXXPXPXPPPKXPXPXXXGGGXGFXPP 555
PPP G + P PPP P G + PP
Sbjct: 423 PPPPPPGSYAPVPWGQPPPYASYPPPPPGSSMYNPP 458
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,161,372
Number of Sequences: 37544
Number of extensions: 316433
Number of successful extensions: 2020
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1616
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2682675460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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